Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:18:14 (3330606): wrapper (7.7.26015): starting
22:18:14 (3330606): wrapper: running run_atlas (--nthreads 9)
[2025-02-23 22:18:14] Arguments: --nthreads 9
[2025-02-23 22:18:14] Threads: 9
[2025-02-23 22:18:14] Checking for CVMFS
[2025-02-23 22:18:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-23 22:18:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-23 22:18:14] Running cvmfs_config stat atlas.cern.ch
[2025-02-23 22:18:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-23 22:18:14] 2.11.5.0 1342635 137010 204976 142997 1 110 18611678 37641217 10450 130560 0 4596719 99.246 7526933 36462 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-23 22:18:14] CVMFS is ok
[2025-02-23 22:18:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 22:18:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 22:18:14] Further information can be found at the LHC@home message board.
[2025-02-23 22:18:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 22:18:14] Checking for apptainer binary...
[2025-02-23 22:18:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-23 22:18:14] Running /usr/bin/apptainer --version
[2025-02-23 22:18:14] apptainer version 1.3.6-1.el9
[2025-02-23 22:18:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 22:18:14] c6-1-24-3.aglt2.org
[2025-02-23 22:18:14] apptainer works
[2025-02-23 22:18:14] Set ATHENA_PROC_NUMBER=9
[2025-02-23 22:18:14] Set ATHENA_CORE_NUMBER=9
[2025-02-23 22:18:14] Starting ATLAS job with PandaID=6526811999
[2025-02-23 22:18:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 01:02:02]  *** The last 200 lines of the pilot log: ***
[2025-02-24 01:02:02] 2025-02-24 06:01:50,550 | INFO     | mean x: 1740372160.5
[2025-02-24 01:02:02] 2025-02-24 06:01:50,550 | INFO     | mean y: 2295558.128205128
[2025-02-24 01:02:02] 2025-02-24 06:01:50,550 | INFO     | -- intersect: 15709798469.14145
[2025-02-24 01:02:02] 2025-02-24 06:01:50,550 | INFO     | intersect: 15709798469.14145
[2025-02-24 01:02:02] 2025-02-24 06:01:50,550 | INFO     | chi2: 2.787387390919835
[2025-02-24 01:02:02] 2025-02-24 06:01:50,551 | INFO     | current chi2=2.787387390919835 (change=45.70610545262838 %)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,551 | INFO     | model: linear, x: [1740367738.0, 1740367799.0, 1740367860.0, 1740367921.0, 1740367982.0, 1740368043.0, 1740368104.0, 1740368165.0, 1740368226.0, 1740368287.0, 1740
[2025-02-24 01:02:02] 2025-02-24 06:01:50,551 | INFO     | sum of square deviations: 1067554900.0
[2025-02-24 01:02:02] 2025-02-24 06:01:50,552 | INFO     | sum of deviations: -33299392602.0
[2025-02-24 01:02:02] 2025-02-24 06:01:50,552 | INFO     | mean x: 1740372313.0
[2025-02-24 01:02:02] 2025-02-24 06:01:50,552 | INFO     | mean y: 2327117.59602649
[2025-02-24 01:02:02] 2025-02-24 06:01:50,552 | INFO     | -- intersect: 54288379220.61932
[2025-02-24 01:02:02] 2025-02-24 06:01:50,552 | INFO     | intersect: 54288379220.61932
[2025-02-24 01:02:02] 2025-02-24 06:01:50,552 | INFO     | chi2: 1.7069521975898017
[2025-02-24 01:02:02] 2025-02-24 06:01:50,552 | INFO     | current chi2=1.7069521975898017 (change=38.761572820830295 %)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,552 | INFO     | model: linear, x: [1740368043.0, 1740368104.0, 1740368165.0, 1740368226.0, 1740368287.0, 1740368348.0, 1740368409.0, 1740368470.0, 1740368531.0, 1740368592.0, 1740
[2025-02-24 01:02:02] 2025-02-24 06:01:50,553 | INFO     | sum of square deviations: 964976232.5
[2025-02-24 01:02:02] 2025-02-24 06:01:50,553 | INFO     | sum of deviations: -49109015782.5
[2025-02-24 01:02:02] 2025-02-24 06:01:50,553 | INFO     | mean x: 1740372465.5
[2025-02-24 01:02:02] 2025-02-24 06:01:50,553 | INFO     | mean y: 2350404.102739726
[2025-02-24 01:02:02] 2025-02-24 06:01:50,553 | INFO     | -- intersect: 88572385599.93637
[2025-02-24 01:02:02] 2025-02-24 06:01:50,554 | INFO     | intersect: 88572385599.93637
[2025-02-24 01:02:02] 2025-02-24 06:01:50,554 | INFO     | chi2: 1.0017584816527576
[2025-02-24 01:02:02] 2025-02-24 06:01:50,554 | INFO     | current chi2=1.0017584816527576 (change=41.313032487539495 %)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,554 | INFO     | model: linear, x: [1740368348.0, 1740368409.0, 1740368470.0, 1740368531.0, 1740368592.0, 1740368653.0, 1740368714.0, 1740368775.0, 1740368836.0, 1740368897.0, 1740
[2025-02-24 01:02:02] 2025-02-24 06:01:50,554 | INFO     | sum of square deviations: 869188390.0
[2025-02-24 01:02:02] 2025-02-24 06:01:50,555 | INFO     | sum of deviations: -44049718573.99999
[2025-02-24 01:02:02] 2025-02-24 06:01:50,555 | INFO     | mean x: 1740372618.0
[2025-02-24 01:02:02] 2025-02-24 06:01:50,555 | INFO     | mean y: 2342301.170212766
[2025-02-24 01:02:02] 2025-02-24 06:01:50,555 | INFO     | -- intersect: 88202926799.07819
[2025-02-24 01:02:02] 2025-02-24 06:01:50,555 | INFO     | intersect: 88202926799.07819
[2025-02-24 01:02:02] 2025-02-24 06:01:50,555 | INFO     | chi2: 0.9965063990212117
[2025-02-24 01:02:02] 2025-02-24 06:01:50,555 | INFO     | current chi2=0.9965063990212117 (change=0.5242863152883598 %)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,556 | INFO     | left removable region: 40
[2025-02-24 01:02:02] 2025-02-24 06:01:50,556 | INFO     | model: linear, x: [1740369568.0, 1740369629.0, 1740369690.0, 1740369751.0, 1740369812.0, 1740369873.0, 1740369934.0, 1740369995.0, 1740370056.0, 1740370117.0, 1740
[2025-02-24 01:02:02] 2025-02-24 06:01:50,556 | INFO     | sum of square deviations: 471562330.0
[2025-02-24 01:02:02] 2025-02-24 06:01:50,556 | INFO     | sum of deviations: -14165559690.000004
[2025-02-24 01:02:02] 2025-02-24 06:01:50,556 | INFO     | mean x: 1740373045.0
[2025-02-24 01:02:02] 2025-02-24 06:01:50,556 | INFO     | mean y: 2331029.747826087
[2025-02-24 01:02:02] 2025-02-24 06:01:50,557 | INFO     | -- intersect: 52282499913.92176
[2025-02-24 01:02:02] 2025-02-24 06:01:50,557 | INFO     | intersect: 52282499913.92176
[2025-02-24 01:02:02] 2025-02-24 06:01:50,557 | INFO     | chi2: 0.1450309394092509
[2025-02-24 01:02:02] 2025-02-24 06:01:50,557 | INFO     | -- intersect: 52282499913.92176
[2025-02-24 01:02:02] 2025-02-24 06:01:50,557 | INFO     | current memory leak: -30.04 B/s (using 115 data points, chi2=0.15)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,558 | INFO     | ..............................
[2025-02-24 01:02:02] 2025-02-24 06:01:50,558 | INFO     | . Timing measurements:
[2025-02-24 01:02:02] 2025-02-24 06:01:50,558 | INFO     | . get job = 0 s
[2025-02-24 01:02:02] 2025-02-24 06:01:50,558 | INFO     | . initial setup = 2 s
[2025-02-24 01:02:02] 2025-02-24 06:01:50,558 | INFO     | . payload setup = 4 s
[2025-02-24 01:02:02] 2025-02-24 06:01:50,558 | INFO     | . stage-in = 0 s
[2025-02-24 01:02:02] 2025-02-24 06:01:50,558 | INFO     | . payload execution = 9778 s
[2025-02-24 01:02:02] 2025-02-24 06:01:50,558 | INFO     | . stage-out = 0 s
[2025-02-24 01:02:02] 2025-02-24 06:01:50,558 | INFO     | . log creation = 0 s
[2025-02-24 01:02:02] 2025-02-24 06:01:50,558 | INFO     | ..............................
[2025-02-24 01:02:02] 2025-02-24 06:01:50,643 | INFO     | 
[2025-02-24 01:02:02] 2025-02-24 06:01:50,644 | INFO     | job summary report
[2025-02-24 01:02:02] 2025-02-24 06:01:50,644 | INFO     | --------------------------------------------------
[2025-02-24 01:02:02] 2025-02-24 06:01:50,650 | INFO     | PanDA job id: 6526811999
[2025-02-24 01:02:02] 2025-02-24 06:01:50,650 | WARNING  | process 3340600 can no longer be monitored (due to stat problems) - aborting
[2025-02-24 01:02:02] 2025-02-24 06:01:50,650 | INFO     | task id: 43205075
[2025-02-24 01:02:02] 2025-02-24 06:01:50,651 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6526811999/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,651 | INFO     | errors: (none)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,651 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 01:02:02] 2025-02-24 06:01:50,651 | INFO     | pilot state: finished 
[2025-02-24 01:02:02] 2025-02-24 06:01:50,652 | INFO     | transexitcode: 0
[2025-02-24 01:02:02] 2025-02-24 06:01:50,652 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6526811999/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,652 | INFO     | exeerrorcode: 0
[2025-02-24 01:02:02] 2025-02-24 06:01:50,653 | INFO     | exeerrordiag: 
[2025-02-24 01:02:02] 2025-02-24 06:01:50,653 | INFO     | exitcode: 0
[2025-02-24 01:02:02] 2025-02-24 06:01:50,653 | INFO     | exitmsg: OK
[2025-02-24 01:02:02] 2025-02-24 06:01:50,654 | INFO     | cpuconsumptiontime: 77413 s
[2025-02-24 01:02:02] 2025-02-24 06:01:50,654 | INFO     | nevents: 400
[2025-02-24 01:02:02] 2025-02-24 06:01:50,654 | INFO     | neventsw: 0
[2025-02-24 01:02:02] 2025-02-24 06:01:50,654 | INFO     | pid: 3340600
[2025-02-24 01:02:02] 2025-02-24 06:01:50,654 | INFO     | pgrp: 3340600
[2025-02-24 01:02:02] 2025-02-24 06:01:50,655 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3730846 B
[2025-02-24 01:02:02] 2025-02-24 06:01:50,655 | INFO     | corecount: 9
[2025-02-24 01:02:02] 2025-02-24 06:01:50,655 | INFO     | event service: False
[2025-02-24 01:02:02] 2025-02-24 06:01:50,655 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 17472 B
[2025-02-24 01:02:02] 2025-02-24 06:01:50,655 | INFO     | sizes: {0: 2383091, 1: 2383346, 4: 2383552, 12: 2383580, 9786: 2412036, 9787: 2420977, 9788: 2421161, 9792: 2421331}
[2025-02-24 01:02:02] 2025-02-24 06:01:50,655 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-24 01:02:02] 2025-02-24 06:01:50,655 | INFO     | --------------------------------------------------
[2025-02-24 01:02:02] 2025-02-24 06:01:50,656 | INFO     | 
[2025-02-24 01:02:02] 2025-02-24 06:01:50,656 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-24 01:02:02] 2025-02-24 06:01:50,673 | INFO     | sufficient remaining disk space (74136420352 B)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,674 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,674 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6526811999: 4112313 B (within 2537553920 B limit)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,675 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6526811999/HITS.43205075._060512.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,675 | INFO     | total size of present files: 0 B (workdir size: 4112313 B)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,675 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6526811999/HITS.43205075._060512.pool.root.1 since it does not exist
[2025-02-24 01:02:02] 2025-02-24 06:01:50,684 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,685 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,685 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,685 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,685 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,685 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,686 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,686 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,686 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,686 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,687 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 01:02:02] 2025-02-24 06:01:50,687 | INFO     | job 6526811999 has completed (purged errors)
[2025-02-24 01:02:02] 2025-02-24 06:01:50,687 | INFO     | overall cleanup function is called
[2025-02-24 01:02:02] 2025-02-24 06:01:50,781 | INFO     | number of running child processes to parent process 3340600: 1
[2025-02-24 01:02:02] 2025-02-24 06:01:50,781 | INFO     | maximum number of monitored processes: 6
[2025-02-24 01:02:02] 2025-02-24 06:01:50,782 | INFO     | aborting job monitoring since job object (job id=6526811999) has expired
[2025-02-24 01:02:02] 2025-02-24 06:01:51,695 | INFO     | --- collectZombieJob: --- 10, [3340600]
[2025-02-24 01:02:02] 2025-02-24 06:01:51,696 | INFO     | zombie collector waiting for pid 3340600
[2025-02-24 01:02:02] 2025-02-24 06:01:51,696 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 01:02:02] 2025-02-24 06:01:51,696 | INFO     | collected zombie processes
[2025-02-24 01:02:02] 2025-02-24 06:01:51,696 | INFO     | will attempt to kill all subprocesses of pid=3340600
[2025-02-24 01:02:02] 2025-02-24 06:01:51,807 | INFO     | process IDs to be killed: [3340600] (in reverse order)
[2025-02-24 01:02:02] 2025-02-24 06:01:51,887 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 01:02:02] 2025-02-24 06:01:51,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 01:02:02] 2025-02-24 06:01:51,903 | INFO     | did not find any defunct processes belonging to 3340600
[2025-02-24 01:02:02] 2025-02-24 06:01:51,913 | INFO     | did not find any defunct processes belonging to 3340600
[2025-02-24 01:02:02] 2025-02-24 06:01:51,913 | INFO     | ready for new job
[2025-02-24 01:02:02] 2025-02-24 06:01:51,913 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 01:02:02] 2025-02-24 06:01:51,915 | INFO     | **************************************
[2025-02-24 01:02:02] 2025-02-24 06:01:51,915 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 01:02:02] 2025-02-24 06:01:51,915 | INFO     | **************************************
[2025-02-24 01:02:02] 2025-02-24 06:01:51,915 | INFO     | 
[2025-02-24 01:02:02] 2025-02-24 06:01:51,931 | INFO     | architecture information:
[2025-02-24 01:02:02] 2025-02-24 06:01:51,932 | INFO     | executing command: cat /etc/os-release
[2025-02-24 01:02:02] 2025-02-24 06:01:51,945 | INFO     | cat /etc/os-release:
[2025-02-24 01:02:02] NAME="CentOS Linux"
[2025-02-24 01:02:02] VERSION="7 (Core)"
[2025-02-24 01:02:02] ID="centos"
[2025-02-24 01:02:02] ID_LIKE="rhel fedora"
[2025-02-24 01:02:02] VERSION_ID="7"
[2025-02-24 01:02:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 01:02:02] ANSI_COLOR="0;31"
[2025-02-24 01:02:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 01:02:02] HOME_URL="https://www.centos.org/"
[2025-02-24 01:02:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 01:02:02] 
[2025-02-24 01:02:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 01:02:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 01:02:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 01:02:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 01:02:02] 
[2025-02-24 01:02:02] 2025-02-24 06:01:51,946 | INFO     | **************************************
[2025-02-24 01:02:02] 2025-02-24 06:01:52,448 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-24 01:02:02] 2025-02-24 06:01:52,464 | INFO     | sufficient remaining disk space (74141663232 B)
[2025-02-24 01:02:02] 2025-02-24 06:01:52,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 01:02:02] 2025-02-24 06:01:52,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 01:02:02] 2025-02-24 06:01:52,465 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-24 01:02:02] 2025-02-24 06:01:52,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 01:02:02] 2025-02-24 06:01:52,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 01:02:02] 2025-02-24 06:01:52,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 01:02:02] 2025-02-24 06:01:52,466 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 01:02:02] 2025-02-24 06:01:52,467 | INFO     | aborting loop
[2025-02-24 01:02:02] 2025-02-24 06:01:52,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 01:02:02] 2025-02-24 06:01:52,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 01:02:02] 2025-02-24 06:01:52,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 01:02:02] 2025-02-24 06:01:52,691 | INFO     | all data control threads have been joined
[2025-02-24 01:02:02] 2025-02-24 06:01:53,142 | INFO     | all payload control threads have been joined
[2025-02-24 01:02:02] 2025-02-24 06:01:53,470 | INFO     | [job] retrieve thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:53,471 | INFO     | [job] queue monitor thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:53,472 | INFO     | [job] job monitor thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:53,696 | INFO     | [data] control thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:53,795 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:53,795 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:53,818 | INFO     | [data] copytool_in thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:53,878 | INFO     | [payload] failed_post thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:54,025 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:54,052 | INFO     | all job control threads have been joined
[2025-02-24 01:02:02] 2025-02-24 06:01:54,148 | INFO     | [payload] control thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:54,302 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:54,355 | INFO     | [payload] validate_post thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:54,398 | INFO     | [job] validate thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:54,471 | INFO     | [data] copytool_out thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:55,057 | INFO     | [job] control thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:56,518 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 01:02:02] 2025-02-24 06:01:57,156 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139683119388480)>', '<ExcThread(monitor, started 139682620872448)>']
[2025-02-24 01:02:02] 2025-02-24 06:01:57,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 01:02:02] 2025-02-24 06:01:57,488 | INFO     | [monitor] control thread has ended
[2025-02-24 01:02:02] 2025-02-24 06:02:02,204 | INFO     | all workflow threads have been joined
[2025-02-24 01:02:02] 2025-02-24 06:02:02,226 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 01:02:02] 2025-02-24 06:02:02,226 | INFO     | traces error code: 0
[2025-02-24 01:02:02] 2025-02-24 06:02:02,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 01:02:02] 2025-02-24 06:02:02,404 [wrapper] ==== pilot stdout END ====
[2025-02-24 01:02:02] 2025-02-24 06:02:02,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 01:02:02] 2025-02-24 06:02:02,409 [wrapper] pilotpid: 3334202
[2025-02-24 01:02:02] 2025-02-24 06:02:02,411 [wrapper] Pilot exit status: 0
[2025-02-24 01:02:02] 2025-02-24 06:02:02,421 [wrapper] pandaids: 6526811999
[2025-02-24 01:02:02] 2025-02-24 06:02:02,475 [wrapper] cleanup supervisor_pilot 3727664 3334203
[2025-02-24 01:02:02] 2025-02-24 06:02:02,477 [wrapper] Test setup, not cleaning
[2025-02-24 01:02:02] 2025-02-24 06:02:02,482 [wrapper] apfmon messages muted
[2025-02-24 01:02:02] 2025-02-24 06:02:02,484 [wrapper] ==== wrapper stdout END ====
[2025-02-24 01:02:02] 2025-02-24 06:02:02,486 [wrapper] ==== wrapper stderr END ====
[2025-02-24 01:02:02]  *** Error codes and diagnostics ***
[2025-02-24 01:02:02]     "exeErrorCode": 0,
[2025-02-24 01:02:02]     "exeErrorDiag": "",
[2025-02-24 01:02:02]     "pilotErrorCode": 0,
[2025-02-24 01:02:02]     "pilotErrorDiag": "",
[2025-02-24 01:02:02]  *** Listing of results directory ***
[2025-02-24 01:02:02] total 666016
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas    491065 Feb 23 11:37 pilot3.tar.gz
[2025-02-24 01:02:02] -rwx------. 1 boincer umatlas     35865 Feb 23 11:43 runpilot2-wrapper.sh
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas      5118 Feb 23 11:43 queuedata.json
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas       100 Feb 23 22:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 01:02:02] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 23 22:18 run_atlas
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas       105 Feb 23 22:18 job.xml
[2025-02-24 01:02:02] -rw-r--r--. 2 boincer umatlas 346986016 Feb 23 22:18 EVNT.43092757._000989.pool.root.1
[2025-02-24 01:02:02] -rw-r--r--. 2 boincer umatlas     17569 Feb 23 22:18 start_atlas.sh
[2025-02-24 01:02:02] drwxrwx--x. 2 boincer umatlas      4096 Feb 23 22:18 shared
[2025-02-24 01:02:02] -rw-r--r--. 2 boincer umatlas    503557 Feb 23 22:18 input.tar.gz
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas         0 Feb 23 22:18 boinc_lockfile
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas      2556 Feb 23 22:18 pandaJob.out
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas       467 Feb 23 22:18 setup.sh.local
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas    987712 Feb 23 22:18 agis_schedconf.cvmfs.json
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas   1582569 Feb 23 22:18 agis_ddmendpoints.agis.ALL.json
[2025-02-24 01:02:02] drwx------. 4 boincer umatlas      4096 Feb 23 22:18 pilot3
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas       530 Feb 24 01:00 boinc_task_state.xml
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas 328434085 Feb 24 01:00 HITS.43205075._060512.pool.root.1
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas        95 Feb 24 01:01 pilot_heartbeat.json
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas      1042 Feb 24 01:01 memory_monitor_summary.json
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas      6841 Feb 24 01:01 init_data.xml
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas    387638 Feb 24 01:01 log.43205075._060512.job.log.tgz.1
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas      7738 Feb 24 01:01 heartbeat.json
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas      8192 Feb 24 01:01 boinc_mmap_file
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas        27 Feb 24 01:01 wrapper_checkpoint.txt
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas      4338 Feb 24 01:02 pilotlog.txt
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas    998323 Feb 24 01:02 log.43205075._060512.job.log.1
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas       357 Feb 24 01:02 output.list
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas       620 Feb 24 01:02 runtime_log
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas   1402880 Feb 24 01:02 result.tar.gz
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas     11423 Feb 24 01:02 runtime_log.err
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas       654 Feb 24 01:02 AbiKDmhFU66n9Rq4apOajLDm4fhM0noT9bVoFjIUDmf4eKDm3n8xwn.diag
[2025-02-24 01:02:02] -rw-r--r--. 1 boincer umatlas     22051 Feb 24 01:02 stderr.txt
[2025-02-24 01:02:02] HITS file was successfully produced:
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas 328434085 Feb 24 01:00 shared/HITS.pool.root.1
[2025-02-24 01:02:02]  *** Contents of shared directory: ***
[2025-02-24 01:02:02] total 661488
[2025-02-24 01:02:02] -rw-r--r--. 2 boincer umatlas 346986016 Feb 23 22:18 ATLAS.root_0
[2025-02-24 01:02:02] -rw-r--r--. 2 boincer umatlas     17569 Feb 23 22:18 start_atlas.sh
[2025-02-24 01:02:02] -rw-r--r--. 2 boincer umatlas    503557 Feb 23 22:18 input.tar.gz
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas 328434085 Feb 24 01:00 HITS.pool.root.1
[2025-02-24 01:02:02] -rw-------. 1 boincer umatlas   1402880 Feb 24 01:02 result.tar.gz
01:02:03 (3330606): run_atlas exited; CPU time 77367.243448
01:02:03 (3330606): called boinc_finish(0)

</stderr_txt>
]]>

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