Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:33:11 (1239171): wrapper (7.7.26015): starting
00:33:11 (1239171): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 00:33:11] Arguments: --nthreads 12
[2025-02-25 00:33:11] Threads: 12
[2025-02-25 00:33:11] Checking for CVMFS
[2025-02-25 00:33:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 00:33:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 00:33:11] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 00:33:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 00:33:11] 2.12.6.0 3809 4773 79084 143020 1 56 38979744 46080001 921 130560 0 10358644 99.990 1213432 13939 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-02-25 00:33:11] CVMFS is ok
[2025-02-25 00:33:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 00:33:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 00:33:11] Further information can be found at the LHC@home message board.
[2025-02-25 00:33:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 00:33:11] Checking for apptainer binary...
[2025-02-25 00:33:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 00:33:11] Running /usr/bin/apptainer --version
[2025-02-25 00:33:11] apptainer version 1.3.6-1.el9
[2025-02-25 00:33:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 00:33:11] gpu01.farm.particle.cz
[2025-02-25 00:33:11] apptainer works
[2025-02-25 00:33:11] Set ATHENA_PROC_NUMBER=12
[2025-02-25 00:33:11] Set ATHENA_CORE_NUMBER=12
[2025-02-25 00:33:11] Starting ATLAS job with PandaID=6524517807
[2025-02-25 00:33:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 02:02:24]  *** The last 200 lines of the pilot log: ***
[2025-02-25 02:02:24]  domain=
[2025-02-25 02:02:24]  filesize=368934
[2025-02-25 02:02:24]  filetype=log
[2025-02-25 02:02:24]  guid=298e01e2-feac-427d-b1d1-89f0b91fcf46
[2025-02-25 02:02:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 02:02:24]  is_altstaged=None
[2025-02-25 02:02:24]  is_tar=False
[2025-02-25 02:02:24]  lfn=log.43078919._091157.job.log.tgz.1
[2025-02-25 02:02:24]  mtime=0
[2025-02-25 02:02:24]  protocol_id=None
[2025-02-25 02:02:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 02:02:24]  replicas=None
[2025-02-25 02:02:24]  scope=mc23_13p6TeV
[2025-02-25 02:02:24]  status=None
[2025-02-25 02:02:24]  status_code=0
[2025-02-25 02:02:24]  storage_token=
[2025-02-25 02:02:24]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6524517807/log.43078919._091157.job.log.tgz.1
[2025-02-25 02:02:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/40/log.43078919._091157.job.log.tgz.1
[2025-02-25 02:02:24]  workdir=None
[2025-02-25 02:02:24] ]
[2025-02-25 02:02:24] 2025-02-25 01:02:08,565 | INFO     | transferring file log.43078919._091157.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6524517807/log.43078919._091157.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-02-25 02:02:24] 2025-02-25 01:02:08,566 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6524517807/log.43078919._091157.job.log.tgz.1 /var/lib/boinc/slots/1/log.43078919._091157.job
[2025-02-25 02:02:24] 2025-02-25 01:02:08,579 | INFO     | adding to output.list: log.43078919._091157.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/40/log.43078919._091157.job.log.tg
[2025-02-25 02:02:24] 2025-02-25 01:02:08,579 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 02:02:24] 2025-02-25 01:02:08,579 | INFO     | summary of transferred files:
[2025-02-25 02:02:24] 2025-02-25 01:02:08,579 | INFO     |  -- lfn=log.43078919._091157.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 02:02:24] 2025-02-25 01:02:08,580 | INFO     | stage-out finished correctly
[2025-02-25 02:02:24] 2025-02-25 01:02:08,632 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 02:02:24] 2025-02-25 01:02:08,701 | INFO     | job 6524517807 has state=finished
[2025-02-25 02:02:24] 2025-02-25 01:02:08,701 | INFO     | preparing for final server update for job 6524517807 in state='finished'
[2025-02-25 02:02:24] 2025-02-25 01:02:08,702 | INFO     | this job has now completed (state=finished)
[2025-02-25 02:02:24] 2025-02-25 01:02:08,702 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 02:02:24] 2025-02-25 01:02:08,702 | INFO     | log transfer has been attempted: DONE
[2025-02-25 02:02:24] 2025-02-25 01:02:08,702 | INFO     | job 6524517807 has finished - writing final server update
[2025-02-25 02:02:24] 2025-02-25 01:02:08,702 | INFO     | total number of processed events: 400 (read)
[2025-02-25 02:02:24] 2025-02-25 01:02:08,704 | INFO     | executing command: lscpu
[2025-02-25 02:02:24] 2025-02-25 01:02:08,730 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2025-02-25 02:02:24] 2025-02-25 01:02:08,744 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 02:02:24] 2025-02-25 01:02:09,432 | INFO     | 5332s have passed since pilot start
[2025-02-25 02:02:24] 2025-02-25 01:02:10,033 | INFO     | monitor loop #408: job 0:6524517807 is in state 'finished'
[2025-02-25 02:02:24] 2025-02-25 01:02:10,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 02:02:24] 2025-02-25 01:02:11,306 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-25 02:02:24] 2025-02-25 01:02:11,306 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6524517807/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 02:02:24] 2025-02-25 01:02:11,307 | INFO     | extracted standard info from prmon json
[2025-02-25 02:02:24] 2025-02-25 01:02:11,307 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 02:02:24] 2025-02-25 01:02:11,307 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 02:02:24] 2025-02-25 01:02:11,307 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 02:02:24] 2025-02-25 01:02:11,307 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 02:02:24] 2025-02-25 01:02:11,309 | INFO     | fitting pss+swap vs Time
[2025-02-25 02:02:24] 2025-02-25 01:02:11,309 | INFO     | model: linear, x: [1740440324.0, 1740440385.0, 1740440446.0, 1740440507.0, 1740440568.0, 1740440629.0, 1740440690.0, 1740440751.0, 1740440812.0, 1740440873.0, 1740
[2025-02-25 02:02:24] 2025-02-25 01:02:11,309 | INFO     | sum of square deviations: 158737860.0
[2025-02-25 02:02:24] 2025-02-25 01:02:11,309 | INFO     | sum of deviations: 6750106554.5
[2025-02-25 02:02:24] 2025-02-25 01:02:11,310 | INFO     | mean x: 1740442733.5
[2025-02-25 02:02:24] 2025-02-25 01:02:11,310 | INFO     | mean y: 2863893.0625
[2025-02-25 02:02:24] 2025-02-25 01:02:11,310 | INFO     | -- intersect: -74007040884.09807
[2025-02-25 02:02:24] 2025-02-25 01:02:11,310 | INFO     | intersect: -74007040884.09807
[2025-02-25 02:02:24] 2025-02-25 01:02:11,310 | INFO     | chi2: 1.8001586886898178
[2025-02-25 02:02:24] 2025-02-25 01:02:11,310 | INFO     | -- intersect: -74007040884.09807
[2025-02-25 02:02:24] 2025-02-25 01:02:11,310 | INFO     | current memory leak: 42.52 B/s (using 80 data points, chi2=1.80)
[2025-02-25 02:02:24] 2025-02-25 01:02:11,310 | INFO     | ..............................
[2025-02-25 02:02:24] 2025-02-25 01:02:11,311 | INFO     | . Timing measurements:
[2025-02-25 02:02:24] 2025-02-25 01:02:11,311 | INFO     | . get job = 0 s
[2025-02-25 02:02:24] 2025-02-25 01:02:11,311 | INFO     | . initial setup = 1 s
[2025-02-25 02:02:24] 2025-02-25 01:02:11,311 | INFO     | . payload setup = 3 s
[2025-02-25 02:02:24] 2025-02-25 01:02:11,311 | INFO     | . stage-in = 0 s
[2025-02-25 02:02:24] 2025-02-25 01:02:11,311 | INFO     | . payload execution = 5308 s
[2025-02-25 02:02:24] 2025-02-25 01:02:11,311 | INFO     | . stage-out = 0 s
[2025-02-25 02:02:24] 2025-02-25 01:02:11,311 | INFO     | . log creation = 0 s
[2025-02-25 02:02:24] 2025-02-25 01:02:11,311 | INFO     | ..............................
[2025-02-25 02:02:24] 2025-02-25 01:02:11,427 | INFO     | 
[2025-02-25 02:02:24] 2025-02-25 01:02:11,427 | INFO     | job summary report
[2025-02-25 02:02:24] 2025-02-25 01:02:11,427 | INFO     | --------------------------------------------------
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | PanDA job id: 6524517807
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | task id: 43078919
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | errors: (none)
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | pilot state: finished 
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | transexitcode: 0
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | exeerrorcode: 0
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | exeerrordiag: 
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | exitcode: 0
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | exitmsg: OK
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | cpuconsumptiontime: 53788 s
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | nevents: 400
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | neventsw: 0
[2025-02-25 02:02:24] 2025-02-25 01:02:11,428 | INFO     | pid: 1249689
[2025-02-25 02:02:24] 2025-02-25 01:02:11,429 | INFO     | pgrp: 1249689
[2025-02-25 02:02:24] 2025-02-25 01:02:11,429 | INFO     | corecount: 12
[2025-02-25 02:02:24] 2025-02-25 01:02:11,429 | INFO     | event service: False
[2025-02-25 02:02:24] 2025-02-25 01:02:11,429 | INFO     | sizes: {0: 2383364, 3: 2383570, 11: 2383598, 5315: 2410118, 5316: 2410117, 5317: 2419298, 5320: 2419412}
[2025-02-25 02:02:24] 2025-02-25 01:02:11,429 | INFO     | --------------------------------------------------
[2025-02-25 02:02:24] 2025-02-25 01:02:11,429 | INFO     | 
[2025-02-25 02:02:24] 2025-02-25 01:02:11,429 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-02-25 02:02:24] 2025-02-25 01:02:11,441 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,441 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,441 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,441 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,442 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 02:02:24] 2025-02-25 01:02:11,443 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,443 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 02:02:24] 2025-02-25 01:02:11,443 | INFO     | job 6524517807 has completed (purged errors)
[2025-02-25 02:02:24] 2025-02-25 01:02:11,443 | INFO     | overall cleanup function is called
[2025-02-25 02:02:24] 2025-02-25 01:02:12,451 | INFO     | --- collectZombieJob: --- 10, [1249689]
[2025-02-25 02:02:24] 2025-02-25 01:02:12,451 | INFO     | zombie collector waiting for pid 1249689
[2025-02-25 02:02:24] 2025-02-25 01:02:12,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 02:02:24] 2025-02-25 01:02:12,454 | INFO     | collected zombie processes
[2025-02-25 02:02:24] 2025-02-25 01:02:12,454 | INFO     | will attempt to kill all subprocesses of pid=1249689
[2025-02-25 02:02:24] 2025-02-25 01:02:12,504 | INFO     | process IDs to be killed: [1249689] (in reverse order)
[2025-02-25 02:02:24] 2025-02-25 01:02:12,542 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 02:02:24] 2025-02-25 01:02:12,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 02:02:24] 2025-02-25 01:02:12,546 | INFO     | did not find any defunct processes belonging to 1249689
[2025-02-25 02:02:24] 2025-02-25 01:02:12,549 | INFO     | did not find any defunct processes belonging to 1249689
[2025-02-25 02:02:24] 2025-02-25 01:02:12,549 | INFO     | ready for new job
[2025-02-25 02:02:24] 2025-02-25 01:02:12,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 02:02:24] 2025-02-25 01:02:12,551 | INFO     | **************************************
[2025-02-25 02:02:24] 2025-02-25 01:02:12,551 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 02:02:24] 2025-02-25 01:02:12,551 | INFO     | **************************************
[2025-02-25 02:02:24] 2025-02-25 01:02:12,551 | INFO     | 
[2025-02-25 02:02:24] 2025-02-25 01:02:12,553 | INFO     | architecture information:
[2025-02-25 02:02:24] 2025-02-25 01:02:12,553 | INFO     | executing command: cat /etc/os-release
[2025-02-25 02:02:24] 2025-02-25 01:02:12,563 | INFO     | cat /etc/os-release:
[2025-02-25 02:02:24] NAME="CentOS Linux"
[2025-02-25 02:02:24] VERSION="7 (Core)"
[2025-02-25 02:02:24] ID="centos"
[2025-02-25 02:02:24] ID_LIKE="rhel fedora"
[2025-02-25 02:02:24] VERSION_ID="7"
[2025-02-25 02:02:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 02:02:24] ANSI_COLOR="0;31"
[2025-02-25 02:02:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 02:02:24] HOME_URL="https://www.centos.org/"
[2025-02-25 02:02:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 02:02:24] 
[2025-02-25 02:02:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 02:02:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 02:02:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 02:02:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 02:02:24] 
[2025-02-25 02:02:24] 2025-02-25 01:02:12,564 | INFO     | **************************************
[2025-02-25 02:02:24] 2025-02-25 01:02:13,067 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-02-25 02:02:24] 2025-02-25 01:02:13,078 | INFO     | sufficient remaining disk space (79920365568 B)
[2025-02-25 02:02:24] 2025-02-25 01:02:13,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 02:02:24] 2025-02-25 01:02:13,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 02:02:24] 2025-02-25 01:02:13,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 02:02:24] 2025-02-25 01:02:13,079 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 02:02:24] 2025-02-25 01:02:13,079 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 02:02:24] 2025-02-25 01:02:13,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 02:02:24] 2025-02-25 01:02:13,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 02:02:24] 2025-02-25 01:02:13,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 02:02:24] 2025-02-25 01:02:13,541 | INFO     | aborting loop
[2025-02-25 02:02:24] 2025-02-25 01:02:13,935 | INFO     | all payload control threads have been joined
[2025-02-25 02:02:24] 2025-02-25 01:02:13,940 | INFO     | all data control threads have been joined
[2025-02-25 02:02:24] 2025-02-25 01:02:14,084 | INFO     | [job] retrieve thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:14,084 | INFO     | [job] queue monitor thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:14,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 02:02:24] 2025-02-25 01:02:14,162 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:14,300 | INFO     | all job control threads have been joined
[2025-02-25 02:02:24] 2025-02-25 01:02:14,323 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:14,420 | INFO     | [payload] failed_post thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:14,547 | INFO     | [job] job monitor thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:14,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 02:02:24] 2025-02-25 01:02:14,889 | INFO     | [payload] validate_post thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:14,940 | INFO     | [payload] control thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:14,945 | INFO     | [data] control thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:15,019 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:15,305 | INFO     | [job] control thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:15,392 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:15,414 | INFO     | [job] validate thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:15,529 | INFO     | [data] copytool_in thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:16,145 | INFO     | [data] copytool_out thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:18,713 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 02:02:24] 2025-02-25 01:02:19,556 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644835374912)>', '<ExcThread(monitor, started 140644559324928)>']
[2025-02-25 02:02:24] 2025-02-25 01:02:20,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 02:02:24] 2025-02-25 01:02:20,115 | INFO     | [monitor] control thread has ended
[2025-02-25 02:02:24] 2025-02-25 01:02:24,582 | INFO     | all workflow threads have been joined
[2025-02-25 02:02:24] 2025-02-25 01:02:24,582 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 02:02:24] 2025-02-25 01:02:24,582 | INFO     | traces error code: 0
[2025-02-25 02:02:24] 2025-02-25 01:02:24,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 02:02:24] 2025-02-25 01:02:24,648 [wrapper] ==== pilot stdout END ====
[2025-02-25 02:02:24] 2025-02-25 01:02:24,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 02:02:24] 2025-02-25 01:02:24,652 [wrapper] pilotpid: 1242975
[2025-02-25 02:02:24] 2025-02-25 01:02:24,654 [wrapper] Pilot exit status: 0
[2025-02-25 02:02:24] 2025-02-25 01:02:24,661 [wrapper] pandaids: 6524517807
[2025-02-25 02:02:24] 2025-02-25 01:02:24,686 [wrapper] cleanup supervisor_pilot 1331039 1242976
[2025-02-25 02:02:24] 2025-02-25 01:02:24,689 [wrapper] Test setup, not cleaning
[2025-02-25 02:02:24] 2025-02-25 01:02:24,692 [wrapper] apfmon messages muted
[2025-02-25 02:02:24] 2025-02-25 01:02:24,694 [wrapper] ==== wrapper stdout END ====
[2025-02-25 02:02:24] 2025-02-25 01:02:24,696 [wrapper] ==== wrapper stderr END ====
[2025-02-25 02:02:24]  *** Error codes and diagnostics ***
[2025-02-25 02:02:24]     "exeErrorCode": 0,
[2025-02-25 02:02:24]     "exeErrorDiag": "",
[2025-02-25 02:02:24]     "pilotErrorCode": 0,
[2025-02-25 02:02:24]     "pilotErrorDiag": "",
[2025-02-25 02:02:24]  *** Listing of results directory ***
[2025-02-25 02:02:24] total 659336
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc    491065 Feb 23 11:53 pilot3.tar.gz
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc      5118 Feb 23 12:33 queuedata.json
[2025-02-25 02:02:24] -rwx------ 1 boinc boinc     35865 Feb 23 12:33 runpilot2-wrapper.sh
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc       100 Feb 25 00:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 02:02:24] -rwxr-xr-x 1 boinc boinc      7986 Feb 25 00:33 run_atlas
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc       105 Feb 25 00:33 job.xml
[2025-02-25 02:02:24] -rw-r--r-- 2 boinc boinc 343571887 Feb 25 00:33 EVNT.43078917._002031.pool.root.1
[2025-02-25 02:02:24] -rw-r--r-- 2 boinc boinc     17569 Feb 25 00:33 start_atlas.sh
[2025-02-25 02:02:24] drwxrwx--x 2 boinc boinc      4096 Feb 25 00:33 shared
[2025-02-25 02:02:24] -rw-r--r-- 2 boinc boinc    503561 Feb 25 00:33 input.tar.gz
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc      6657 Feb 25 00:33 init_data.xml
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc         0 Feb 25 00:33 boinc_lockfile
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc      2549 Feb 25 00:33 pandaJob.out
[2025-02-25 02:02:24] -rw------- 1 boinc boinc       424 Feb 25 00:33 setup.sh.local
[2025-02-25 02:02:24] -rw------- 1 boinc boinc    987354 Feb 25 00:33 agis_schedconf.cvmfs.json
[2025-02-25 02:02:24] -rw------- 1 boinc boinc   1582569 Feb 25 00:33 agis_ddmendpoints.agis.ALL.json
[2025-02-25 02:02:24] drwx------ 4 boinc boinc      4096 Feb 25 00:33 pilot3
[2025-02-25 02:02:24] -rw------- 1 boinc boinc 325988845 Feb 25 02:01 HITS.43078919._091157.pool.root.1
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc       530 Feb 25 02:01 boinc_task_state.xml
[2025-02-25 02:02:24] -rw------- 1 boinc boinc      1013 Feb 25 02:02 memory_monitor_summary.json
[2025-02-25 02:02:24] -rw------- 1 boinc boinc        95 Feb 25 02:02 pilot_heartbeat.json
[2025-02-25 02:02:24] -rw------- 1 boinc boinc    368934 Feb 25 02:02 log.43078919._091157.job.log.tgz.1
[2025-02-25 02:02:24] -rw------- 1 boinc boinc      7682 Feb 25 02:02 heartbeat.json
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc      8192 Feb 25 02:02 boinc_mmap_file
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc        27 Feb 25 02:02 wrapper_checkpoint.txt
[2025-02-25 02:02:24] -rw------- 1 boinc boinc      4338 Feb 25 02:02 pilotlog.txt
[2025-02-25 02:02:24] -rw------- 1 boinc boinc    527542 Feb 25 02:02 log.43078919._091157.job.log.1
[2025-02-25 02:02:24] -rw------- 1 boinc boinc       357 Feb 25 02:02 output.list
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc       620 Feb 25 02:02 runtime_log
[2025-02-25 02:02:24] -rw------- 1 boinc boinc    911360 Feb 25 02:02 result.tar.gz
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc     11050 Feb 25 02:02 runtime_log.err
[2025-02-25 02:02:24] -rw------- 1 boinc boinc       660 Feb 25 02:02 cUVMDm3PP66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmRRvKDmKEA9Im.diag
[2025-02-25 02:02:24] -rw-r--r-- 1 boinc boinc     21166 Feb 25 02:02 stderr.txt
[2025-02-25 02:02:24] HITS file was successfully produced:
[2025-02-25 02:02:24] -rw------- 1 boinc boinc 325988845 Feb 25 02:01 shared/HITS.pool.root.1
[2025-02-25 02:02:24]  *** Contents of shared directory: ***
[2025-02-25 02:02:24] total 655284
[2025-02-25 02:02:24] -rw-r--r-- 2 boinc boinc 343571887 Feb 25 00:33 ATLAS.root_0
[2025-02-25 02:02:24] -rw-r--r-- 2 boinc boinc     17569 Feb 25 00:33 start_atlas.sh
[2025-02-25 02:02:24] -rw-r--r-- 2 boinc boinc    503561 Feb 25 00:33 input.tar.gz
[2025-02-25 02:02:24] -rw------- 1 boinc boinc 325988845 Feb 25 02:01 HITS.pool.root.1
[2025-02-25 02:02:24] -rw------- 1 boinc boinc    911360 Feb 25 02:02 result.tar.gz
02:02:25 (1239171): run_atlas exited; CPU time 53774.949239
02:02:25 (1239171): called boinc_finish(0)

</stderr_txt>
]]>

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