Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:02:53 (47492): wrapper (7.7.26015): starting
21:02:53 (47492): wrapper: running run_atlas (--nthreads 8)
[2025-02-23 21:02:53] Arguments: --nthreads 8
[2025-02-23 21:02:53] Threads: 8
[2025-02-23 21:02:53] Checking for CVMFS
[2025-02-23 21:02:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-23 21:02:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-23 21:02:54] Running cvmfs_config stat atlas.cern.ch
[2025-02-23 21:02:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-23 21:02:55] 2.11.5.0 2809159 21777 186376 142994 2 116 14374420 37641217 24917 130560 0 1773551 98.552 5316946 29160 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-23 21:02:55] CVMFS is ok
[2025-02-23 21:02:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 21:02:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 21:02:55] Further information can be found at the LHC@home message board.
[2025-02-23 21:02:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 21:02:55] Checking for apptainer binary...
[2025-02-23 21:02:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-23 21:02:55] Running /usr/bin/apptainer --version
[2025-02-23 21:02:55] apptainer version 1.3.6-1.el9
[2025-02-23 21:02:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 21:02:56] c6-12-29-3.aglt2.org
[2025-02-23 21:02:56] apptainer works
[2025-02-23 21:02:56] Set ATHENA_PROC_NUMBER=8
[2025-02-23 21:02:56] Set ATHENA_CORE_NUMBER=8
[2025-02-23 21:02:56] Starting ATLAS job with PandaID=6524169545
[2025-02-23 21:02:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 04:31:36]  *** The last 200 lines of the pilot log: ***
[2025-02-24 04:31:36] 2025-02-24 09:31:21,998 | INFO     | intersect: -14505300048.406069
[2025-02-24 04:31:36] 2025-02-24 09:31:21,998 | INFO     | chi2: 5.745779534321645
[2025-02-24 04:31:36] 2025-02-24 09:31:21,999 | INFO     | current chi2=5.745779534321645 (change=35.41393931915092 %)
[2025-02-24 04:31:36] 2025-02-24 09:31:21,999 | INFO     | model: linear, x: [1740363385.0, 1740363446.0, 1740363508.0, 1740363568.0, 1740363629.0, 1740363690.0, 1740363751.0, 1740363812.0, 1740363873.0, 1740363934.0, 1740
[2025-02-24 04:31:36] 2025-02-24 09:31:21,999 | INFO     | sum of square deviations: 24310404408.904198
[2025-02-24 04:31:36] 2025-02-24 09:31:22,004 | INFO     | sum of deviations: 116233601722.36905
[2025-02-24 04:31:36] 2025-02-24 09:31:22,004 | INFO     | mean x: 1740376408.8060749
[2025-02-24 04:31:36] 2025-02-24 09:31:22,004 | INFO     | mean y: 2458547.0887850467
[2025-02-24 04:31:36] 2025-02-24 09:31:22,004 | INFO     | -- intersect: -8318678976.813499
[2025-02-24 04:31:36] 2025-02-24 09:31:22,004 | INFO     | intersect: -8318678976.813499
[2025-02-24 04:31:36] 2025-02-24 09:31:22,005 | INFO     | chi2: 3.9891958993229824
[2025-02-24 04:31:36] 2025-02-24 09:31:22,005 | INFO     | current chi2=3.9891958993229824 (change=30.571720068720797 %)
[2025-02-24 04:31:36] 2025-02-24 09:31:22,005 | INFO     | model: linear, x: [1740363690.0, 1740363751.0, 1740363812.0, 1740363873.0, 1740363934.0, 1740363995.0, 1740364056.0, 1740364117.0, 1740364179.0, 1740364239.0, 1740
[2025-02-24 04:31:36] 2025-02-24 09:31:22,006 | INFO     | sum of square deviations: 23468272446.04712
[2025-02-24 04:31:36] 2025-02-24 09:31:22,010 | INFO     | sum of deviations: 22819922062.01654
[2025-02-24 04:31:36] 2025-02-24 09:31:22,010 | INFO     | mean x: 1740376561.3073287
[2025-02-24 04:31:36] 2025-02-24 09:31:22,010 | INFO     | mean y: 2475463.607565012
[2025-02-24 04:31:36] 2025-02-24 09:31:22,010 | INFO     | -- intersect: -1689820276.477174
[2025-02-24 04:31:36] 2025-02-24 09:31:22,010 | INFO     | intersect: -1689820276.477174
[2025-02-24 04:31:36] 2025-02-24 09:31:22,011 | INFO     | chi2: 2.246181040871217
[2025-02-24 04:31:36] 2025-02-24 09:31:22,011 | INFO     | current chi2=2.246181040871217 (change=43.69338840310092 %)
[2025-02-24 04:31:36] 2025-02-24 09:31:22,011 | INFO     | model: linear, x: [1740363995.0, 1740364056.0, 1740364117.0, 1740364179.0, 1740364239.0, 1740364300.0, 1740364361.0, 1740364423.0, 1740364484.0, 1740364544.0, 1740
[2025-02-24 04:31:36] 2025-02-24 09:31:22,012 | INFO     | sum of square deviations: 22645789468.069374
[2025-02-24 04:31:36] 2025-02-24 09:31:22,016 | INFO     | sum of deviations: -41556522193.004776
[2025-02-24 04:31:36] 2025-02-24 09:31:22,016 | INFO     | mean x: 1740376713.8110049
[2025-02-24 04:31:36] 2025-02-24 09:31:22,017 | INFO     | mean y: 2487378.3923444976
[2025-02-24 04:31:36] 2025-02-24 09:31:22,017 | INFO     | -- intersect: 3196193812.5907545
[2025-02-24 04:31:36] 2025-02-24 09:31:22,017 | INFO     | intersect: 3196193812.5907545
[2025-02-24 04:31:36] 2025-02-24 09:31:22,018 | INFO     | chi2: 1.334219350296022
[2025-02-24 04:31:36] 2025-02-24 09:31:22,018 | INFO     | current chi2=1.334219350296022 (change=40.60054260904438 %)
[2025-02-24 04:31:36] 2025-02-24 09:31:22,018 | INFO     | model: linear, x: [1740364300.0, 1740364361.0, 1740364423.0, 1740364484.0, 1740364544.0, 1740364605.0, 1740364666.0, 1740364727.0, 1740364789.0, 1740364849.0, 1740
[2025-02-24 04:31:36] 2025-02-24 09:31:22,018 | INFO     | sum of square deviations: 21842774090.707005
[2025-02-24 04:31:36] 2025-02-24 09:31:22,024 | INFO     | sum of deviations: -72812448157.27606
[2025-02-24 04:31:36] 2025-02-24 09:31:22,024 | INFO     | mean x: 1740376866.3123486
[2025-02-24 04:31:36] 2025-02-24 09:31:22,024 | INFO     | mean y: 2493306.583535109
[2025-02-24 04:31:36] 2025-02-24 09:31:22,024 | INFO     | -- intersect: 5804004590.189397
[2025-02-24 04:31:36] 2025-02-24 09:31:22,025 | INFO     | intersect: 5804004590.189397
[2025-02-24 04:31:36] 2025-02-24 09:31:22,025 | INFO     | chi2: 1.113125560984114
[2025-02-24 04:31:36] 2025-02-24 09:31:22,025 | INFO     | current chi2=1.113125560984114 (change=16.57102254309639 %)
[2025-02-24 04:31:36] 2025-02-24 09:31:22,025 | INFO     | left removable region: 50
[2025-02-24 04:31:36] 2025-02-24 09:31:22,026 | INFO     | model: linear, x: [1740365826.0, 1740365887.0, 1740365948.0, 1740366009.0, 1740366070.0, 1740366130.0, 1740366192.0, 1740366253.0, 1740366314.0, 1740366375.0, 1740
[2025-02-24 04:31:36] 2025-02-24 09:31:22,026 | INFO     | sum of square deviations: 17284027320.42925
[2025-02-24 04:31:36] 2025-02-24 09:31:22,030 | INFO     | sum of deviations: -55030811050.01048
[2025-02-24 04:31:36] 2025-02-24 09:31:22,030 | INFO     | mean x: 1740377445.8115184
[2025-02-24 04:31:36] 2025-02-24 09:31:22,030 | INFO     | mean y: 2505027.1387434555
[2025-02-24 04:31:36] 2025-02-24 09:31:22,030 | INFO     | -- intersect: 5543712559.42208
[2025-02-24 04:31:36] 2025-02-24 09:31:22,030 | INFO     | intersect: 5543712559.42208
[2025-02-24 04:31:36] 2025-02-24 09:31:22,031 | INFO     | chi2: 0.2175068396919122
[2025-02-24 04:31:36] 2025-02-24 09:31:22,031 | INFO     | -- intersect: 5543712559.42208
[2025-02-24 04:31:36] 2025-02-24 09:31:22,031 | INFO     | current memory leak: -3.18 B/s (using 382 data points, chi2=0.22)
[2025-02-24 04:31:36] 2025-02-24 09:31:22,032 | INFO     | ..............................
[2025-02-24 04:31:36] 2025-02-24 09:31:22,032 | INFO     | . Timing measurements:
[2025-02-24 04:31:36] 2025-02-24 09:31:22,032 | INFO     | . get job = 0 s
[2025-02-24 04:31:36] 2025-02-24 09:31:22,032 | INFO     | . initial setup = 5 s
[2025-02-24 04:31:36] 2025-02-24 09:31:22,032 | INFO     | . payload setup = 40 s
[2025-02-24 04:31:36] 2025-02-24 09:31:22,033 | INFO     | . stage-in = 0 s
[2025-02-24 04:31:36] 2025-02-24 09:31:22,033 | INFO     | . payload execution = 26722 s
[2025-02-24 04:31:36] 2025-02-24 09:31:22,033 | INFO     | . stage-out = 2 s
[2025-02-24 04:31:36] 2025-02-24 09:31:22,033 | INFO     | . log creation = 0 s
[2025-02-24 04:31:36] 2025-02-24 09:31:22,033 | INFO     | ..............................
[2025-02-24 04:31:36] 2025-02-24 09:31:22,138 | WARNING  | process 61519 can no longer be monitored (due to stat problems) - aborting
[2025-02-24 04:31:36] 2025-02-24 09:31:22,138 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6524169545/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 04:31:36] 2025-02-24 09:31:22,302 | INFO     | number of running child processes to parent process 61519: 1
[2025-02-24 04:31:36] 2025-02-24 09:31:22,303 | INFO     | maximum number of monitored processes: 7
[2025-02-24 04:31:36] 2025-02-24 09:31:22,303 | INFO     | aborting job monitoring since job object (job id=6524169545) has expired
[2025-02-24 04:31:36] 2025-02-24 09:31:22,544 | INFO     | 
[2025-02-24 04:31:36] 2025-02-24 09:31:22,544 | INFO     | job summary report
[2025-02-24 04:31:36] 2025-02-24 09:31:22,544 | INFO     | --------------------------------------------------
[2025-02-24 04:31:36] 2025-02-24 09:31:22,544 | INFO     | PanDA job id: 6524169545
[2025-02-24 04:31:36] 2025-02-24 09:31:22,544 | INFO     | task id: 43205094
[2025-02-24 04:31:36] 2025-02-24 09:31:22,544 | INFO     | errors: (none)
[2025-02-24 04:31:36] 2025-02-24 09:31:22,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 04:31:36] 2025-02-24 09:31:22,544 | INFO     | pilot state: finished 
[2025-02-24 04:31:36] 2025-02-24 09:31:22,544 | INFO     | transexitcode: 0
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | exeerrorcode: 0
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | exeerrordiag: 
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | exitcode: 0
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | exitmsg: OK
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | cpuconsumptiontime: 89154 s
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | nevents: 400
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | neventsw: 0
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | pid: 61519
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | pgrp: 61519
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | corecount: 8
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | event service: False
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | sizes: {0: 2383139, 1: 2383338, 12: 2383338, 24: 2383366, 30: 2383600, 35: 2383628, 26765: 2419942, 26766: 2419941, 26768: 2428938, 26769: 2428994, 26775: 2429164}
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | --------------------------------------------------
[2025-02-24 04:31:36] 2025-02-24 09:31:22,545 | INFO     | 
[2025-02-24 04:31:36] 2025-02-24 09:31:22,546 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-02-24 04:31:36] 2025-02-24 09:31:22,565 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,565 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,565 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,567 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,567 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,567 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 04:31:36] 2025-02-24 09:31:22,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,567 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 04:31:36] 2025-02-24 09:31:22,567 | INFO     | job 6524169545 has completed (purged errors)
[2025-02-24 04:31:36] 2025-02-24 09:31:22,567 | INFO     | overall cleanup function is called
[2025-02-24 04:31:36] 2025-02-24 09:31:23,584 | INFO     | --- collectZombieJob: --- 10, [61519]
[2025-02-24 04:31:36] 2025-02-24 09:31:23,584 | INFO     | zombie collector waiting for pid 61519
[2025-02-24 04:31:36] 2025-02-24 09:31:23,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 04:31:36] 2025-02-24 09:31:23,585 | INFO     | collected zombie processes
[2025-02-24 04:31:36] 2025-02-24 09:31:23,585 | INFO     | will attempt to kill all subprocesses of pid=61519
[2025-02-24 04:31:36] 2025-02-24 09:31:23,777 | INFO     | process IDs to be killed: [61519] (in reverse order)
[2025-02-24 04:31:36] 2025-02-24 09:31:23,895 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 04:31:36] 2025-02-24 09:31:23,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 04:31:36] 2025-02-24 09:31:23,934 | INFO     | did not find any defunct processes belonging to 61519
[2025-02-24 04:31:36] 2025-02-24 09:31:23,993 | INFO     | did not find any defunct processes belonging to 61519
[2025-02-24 04:31:36] 2025-02-24 09:31:23,994 | INFO     | ready for new job
[2025-02-24 04:31:36] 2025-02-24 09:31:23,994 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 04:31:36] 2025-02-24 09:31:23,996 | INFO     | **************************************
[2025-02-24 04:31:36] 2025-02-24 09:31:23,997 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 04:31:36] 2025-02-24 09:31:23,997 | INFO     | **************************************
[2025-02-24 04:31:36] 2025-02-24 09:31:23,997 | INFO     | 
[2025-02-24 04:31:36] 2025-02-24 09:31:24,035 | INFO     | architecture information:
[2025-02-24 04:31:36] 2025-02-24 09:31:24,039 | INFO     | executing command: cat /etc/os-release
[2025-02-24 04:31:36] 2025-02-24 09:31:24,066 | INFO     | cat /etc/os-release:
[2025-02-24 04:31:36] NAME="CentOS Linux"
[2025-02-24 04:31:36] VERSION="7 (Core)"
[2025-02-24 04:31:36] ID="centos"
[2025-02-24 04:31:36] ID_LIKE="rhel fedora"
[2025-02-24 04:31:36] VERSION_ID="7"
[2025-02-24 04:31:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 04:31:36] ANSI_COLOR="0;31"
[2025-02-24 04:31:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 04:31:36] HOME_URL="https://www.centos.org/"
[2025-02-24 04:31:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 04:31:36] 
[2025-02-24 04:31:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 04:31:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 04:31:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 04:31:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 04:31:36] 
[2025-02-24 04:31:36] 2025-02-24 09:31:24,066 | INFO     | **************************************
[2025-02-24 04:31:36] 2025-02-24 09:31:24,168 | INFO     | PID=51904 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-24 04:31:36] 2025-02-24 09:31:24,168 | INFO     | .. there are 21 such processes running
[2025-02-24 04:31:36] 2025-02-24 09:31:24,569 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-02-24 04:31:36] 2025-02-24 09:31:24,586 | INFO     | sufficient remaining disk space (92464480256 B)
[2025-02-24 04:31:36] 2025-02-24 09:31:24,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 04:31:36] 2025-02-24 09:31:24,587 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 04:31:36] 2025-02-24 09:31:24,587 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 04:31:36] 2025-02-24 09:31:24,587 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-24 04:31:36] 2025-02-24 09:31:24,588 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 04:31:36] 2025-02-24 09:31:24,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 04:31:36] 2025-02-24 09:31:24,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 04:31:36] 2025-02-24 09:31:24,807 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-24 04:31:36] 2025-02-24 09:31:24,807 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-24 04:31:36] 2025-02-24 09:31:24,807 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 04:31:36] 2025-02-24 09:31:24,807 | INFO     | will abort loop
[2025-02-24 04:31:36] 2025-02-24 09:31:25,009 | INFO     | all data control threads have been joined
[2025-02-24 04:31:36] 2025-02-24 09:31:25,336 | INFO     | all payload control threads have been joined
[2025-02-24 04:31:36] 2025-02-24 09:31:25,593 | INFO     | [job] retrieve thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:25,672 | INFO     | [data] copytool_in thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:25,691 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:25,813 | INFO     | [job] job monitor thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:25,845 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:25,885 | INFO     | all job control threads have been joined
[2025-02-24 04:31:36] 2025-02-24 09:31:25,905 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:26,015 | INFO     | [data] control thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:26,119 | INFO     | [job] validate thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:26,164 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:26,342 | INFO     | [payload] control thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:26,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 04:31:36] 2025-02-24 09:31:26,581 | INFO     | [payload] failed_post thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:26,604 | INFO     | [data] copytool_out thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:26,829 | INFO     | [payload] validate_post thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:26,892 | INFO     | [job] control thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:27,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 04:31:36] 2025-02-24 09:31:28,143 | INFO     | [job] queue monitor thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:30,530 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 04:31:36] 2025-02-24 09:31:31,586 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140404040869696)>', '<ExcThread(monitor, started 140403386857216)>']
[2025-02-24 04:31:36] 2025-02-24 09:31:31,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 04:31:36] 2025-02-24 09:31:31,632 | INFO     | [monitor] control thread has ended
[2025-02-24 04:31:36] 2025-02-24 09:31:36,612 | INFO     | all workflow threads have been joined
[2025-02-24 04:31:36] 2025-02-24 09:31:36,612 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 04:31:36] 2025-02-24 09:31:36,612 | INFO     | traces error code: 0
[2025-02-24 04:31:36] 2025-02-24 09:31:36,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 04:31:36] 2025-02-24 09:31:36,798 [wrapper] ==== pilot stdout END ====
[2025-02-24 04:31:36] 2025-02-24 09:31:36,801 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 04:31:36] 2025-02-24 09:31:36,803 [wrapper] pilotpid: 51904
[2025-02-24 04:31:36] 2025-02-24 09:31:36,806 [wrapper] Pilot exit status: 0
[2025-02-24 04:31:36] 2025-02-24 09:31:36,815 [wrapper] pandaids: 6524169545
[2025-02-24 04:31:36] 2025-02-24 09:31:36,888 [wrapper] cleanup supervisor_pilot 1770326 51905
[2025-02-24 04:31:36] 2025-02-24 09:31:36,892 [wrapper] Test setup, not cleaning
[2025-02-24 04:31:36] 2025-02-24 09:31:36,901 [wrapper] apfmon messages muted
[2025-02-24 04:31:36] 2025-02-24 09:31:36,904 [wrapper] ==== wrapper stdout END ====
[2025-02-24 04:31:36] 2025-02-24 09:31:36,906 [wrapper] ==== wrapper stderr END ====
[2025-02-24 04:31:36]  *** Error codes and diagnostics ***
[2025-02-24 04:31:36]     "exeErrorCode": 0,
[2025-02-24 04:31:36]     "exeErrorDiag": "",
[2025-02-24 04:31:36]     "pilotErrorCode": 0,
[2025-02-24 04:31:36]     "pilotErrorDiag": "",
[2025-02-24 04:31:36]  *** Listing of results directory ***
[2025-02-24 04:31:36] total 663996
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas    491065 Feb 23 04:19 pilot3.tar.gz
[2025-02-24 04:31:36] -rwx------. 1 boincer umatlas     35865 Feb 23 04:39 runpilot2-wrapper.sh
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas      5118 Feb 23 04:39 queuedata.json
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas       100 Feb 23 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 04:31:36] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 23 21:02 run_atlas
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas       105 Feb 23 21:02 job.xml
[2025-02-24 04:31:36] -rw-r--r--. 2 boincer umatlas 343259381 Feb 23 21:02 EVNT.43092757._002014.pool.root.1
[2025-02-24 04:31:36] -rw-r--r--. 2 boincer umatlas     17569 Feb 23 21:02 start_atlas.sh
[2025-02-24 04:31:36] drwxrwx--x. 2 boincer umatlas      4096 Feb 23 21:02 shared
[2025-02-24 04:31:36] -rw-r--r--. 2 boincer umatlas    503556 Feb 23 21:02 input.tar.gz
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas         0 Feb 23 21:02 boinc_lockfile
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas      2548 Feb 23 21:02 pandaJob.out
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas       467 Feb 23 21:02 setup.sh.local
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas    987744 Feb 23 21:03 agis_schedconf.cvmfs.json
[2025-02-24 04:31:36] drwx------. 4 boincer umatlas      4096 Feb 23 21:03 pilot3
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas      6859 Feb 24 04:29 init_data.xml
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas 325486106 Feb 24 04:30 HITS.43205094._038994.pool.root.1
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas       532 Feb 24 04:30 boinc_task_state.xml
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas        95 Feb 24 04:30 pilot_heartbeat.json
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas      1055 Feb 24 04:31 memory_monitor_summary.json
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas   1582569 Feb 24 04:31 agis_ddmendpoints.agis.ALL.json
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas    575853 Feb 24 04:31 log.43205094._038994.job.log.tgz.1
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas      7770 Feb 24 04:31 heartbeat.json
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas      8192 Feb 24 04:31 boinc_mmap_file
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas        28 Feb 24 04:31 wrapper_checkpoint.txt
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas      4917 Feb 24 04:31 pilotlog.txt
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas   3116641 Feb 24 04:31 log.43205094._038994.job.log.1
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas       357 Feb 24 04:31 output.list
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas       620 Feb 24 04:31 runtime_log
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas   3706880 Feb 24 04:31 result.tar.gz
[2025-02-24 04:31:36] -rw-------. 1 boincer umatlas       663 Feb 24 04:31 xVVKDmxdN66n9Rq4apOajLDm4fhM0noT9bVoFjIUDmkqeKDmW5Zi3n.diag
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas     11429 Feb 24 04:31 runtime_log.err
[2025-02-24 04:31:36] -rw-r--r--. 1 boincer umatlas     21907 Feb 24 04:31 stderr.txt
[2025-02-24 04:31:37] HITS file was successfully produced:
[2025-02-24 04:31:37] -rw-------. 1 boincer umatlas 325486106 Feb 24 04:30 shared/HITS.pool.root.1
[2025-02-24 04:31:37]  *** Contents of shared directory: ***
[2025-02-24 04:31:37] total 657216
[2025-02-24 04:31:37] -rw-r--r--. 2 boincer umatlas 343259381 Feb 23 21:02 ATLAS.root_0
[2025-02-24 04:31:37] -rw-r--r--. 2 boincer umatlas     17569 Feb 23 21:02 start_atlas.sh
[2025-02-24 04:31:37] -rw-r--r--. 2 boincer umatlas    503556 Feb 23 21:02 input.tar.gz
[2025-02-24 04:31:37] -rw-------. 1 boincer umatlas 325486106 Feb 24 04:30 HITS.pool.root.1
[2025-02-24 04:31:37] -rw-------. 1 boincer umatlas   3706880 Feb 24 04:31 result.tar.gz
04:31:38 (47492): run_atlas exited; CPU time 89314.469297
04:31:38 (47492): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN