Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-24 19:36:26 (68871): Detected: vboxwrapper 26206
2025-02-24 19:36:26 (68871): Detected: BOINC client v8.0.2
2025-02-24 19:36:26 (68871): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-02-24 19:36:26 (68871): Detected: Sandbox Configuration Enabled
2025-02-24 19:36:26 (68871): Successfully copied 'init_data.xml' to the shared directory.
2025-02-24 19:36:26 (68871): Create VM. (boinc_21a43b106b0967ce, slot#0)
2025-02-24 19:36:26 (68871): Setting Memory Size for VM. (4300MB)
2025-02-24 19:36:26 (68871): Setting CPU Count for VM. (3)
2025-02-24 19:36:26 (68871): Setting Chipset Options for VM.
2025-02-24 19:36:26 (68871): Setting Graphics Controller Options for VM.
2025-02-24 19:36:27 (68871): Setting Boot Options for VM.
2025-02-24 19:36:27 (68871): Setting Network Configuration for NAT.
2025-02-24 19:36:27 (68871): Enabling VM Network Access.
2025-02-24 19:36:27 (68871): Disabling USB Support for VM.
2025-02-24 19:36:27 (68871): Disabling COM Port Support for VM.
2025-02-24 19:36:27 (68871): Disabling Audio Support for VM.
2025-02-24 19:36:27 (68871): Disabling Clipboard Support for VM.
2025-02-24 19:36:27 (68871): Disabling Drag and Drop Support for VM.
2025-02-24 19:36:27 (68871): Adding storage controller(s) to VM.
2025-02-24 19:36:27 (68871): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-24 19:36:29 (68871): Adding VirtualBox Guest Additions to VM.
2025-02-24 19:36:29 (68871): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-24 19:36:29 (68871): forwarding host port 63686 to guest port 80
2025-02-24 19:36:29 (68871): Enabling remote desktop for VM.
2025-02-24 19:36:29 (68871): Required extension pack not installed, remote desktop not enabled.
2025-02-24 19:36:29 (68871): Enabling shared directory for VM.
2025-02-24 19:36:29 (68871): Starting VM using VBoxManage interface. (boinc_21a43b106b0967ce, slot#0)
2025-02-24 19:36:34 (68871): Successfully started VM. (PID = '68943')
2025-02-24 19:36:34 (68871): Reporting VM Process ID to BOINC.
2025-02-24 19:36:34 (68871): Guest Log: BIOS: VirtualBox 7.1.6
2025-02-24 19:36:34 (68871): Guest Log: CPUID EDX: 0x178bfbff
2025-02-24 19:36:34 (68871): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-24 19:36:34 (68871): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-24 19:36:34 (68871): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-24 19:36:34 (68871): Detected: Web Application Enabled (http://localhost:63686)
2025-02-24 19:36:34 (68871): Preference change detected
2025-02-24 19:36:34 (68871): Setting CPU throttle for VM. (25%)
2025-02-24 19:36:34 (68871): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 19:36:36 (68871): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-24 19:36:36 (68871): Guest Log: BIOS: Booting from Hard Disk...
2025-02-24 19:36:42 (68871): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-24 19:36:42 (68871): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-24 19:36:42 (68871): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-24 19:36:56 (68871): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-24 19:36:56 (68871): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-24 19:37:31 (68871): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-24 19:37:31 (68871): Guest Log: 00:00:00.000219 main     Log opened 2025-02-24T18:37:29.097229000Z
2025-02-24 19:37:31 (68871): Guest Log: 00:00:00.000399 main     OS Product: Linux
2025-02-24 19:37:31 (68871): Guest Log: 00:00:00.000478 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-24 19:37:31 (68871): Guest Log: 00:00:00.000548 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-24 19:37:31 (68871): Guest Log: 00:00:00.000623 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-24 19:37:31 (68871): Guest Log: 00:00:00.000625 main     Process ID: 1288
2025-02-24 19:37:31 (68871): Guest Log: 00:00:00.000626 main     Package type: LINUX_64BITS_GENERIC
2025-02-24 19:37:31 (68871): Guest Log: 00:00:00.004143 main     5.2.32 r132073 started. Verbose level = 0
2025-02-24 19:37:32 (68871): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-24 19:37:32 (68871): Guest Log: [INFO] Mounting shared directory
2025-02-24 19:37:32 (68871): Guest Log: [INFO] Checking for init_data.xml
2025-02-24 19:37:43 (68871): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-24 19:37:43 (68871): Guest Log: [INFO] Detected branch: prod
2025-02-24 19:37:44 (68871): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-24 19:37:44 (68871): Guest Log: Copying input files
2025-02-24 19:37:56 (68871): Guest Log: Copied input files into RunAtlas.
2025-02-24 19:37:56 (68871): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-24 19:37:56 (68871): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-24 19:37:56 (68871): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-24 19:37:56 (68871): Guest Log: Further information can be found at the LHC@home message board.
2025-02-24 19:38:09 (68871): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-24 19:38:10 (68871): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-24 19:38:10 (68871): Guest Log: 2.6.3.0 1568 0 32036 143011 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-24 19:38:14 (68871): Guest Log: copied the webapp to /var/www
2025-02-24 19:38:14 (68871): Guest Log: ATHENA_PROC_NUMBER=3
2025-02-24 19:38:14 (68871): Guest Log: ATHENA_CORE_NUMBER=3
2025-02-24 19:38:15 (68871): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-24 19:38:15 (68871): Guest Log:  *** Starting ATLAS job. (PandaID=6523510721 taskID=43078919) ***
2025-02-24 21:16:41 (68871): Status Report: Elapsed Time: '6000.466813'
2025-02-24 21:16:41 (68871): Status Report: CPU Time: '10200.930000'
2025-02-24 21:27:29 (68871): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 21:27:44 (68871): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 22:56:59 (68871): Status Report: Elapsed Time: '12000.794730'
2025-02-24 22:56:59 (68871): Status Report: CPU Time: '23404.010000'
2025-02-25 00:37:00 (68871): Status Report: Elapsed Time: '18000.794730'
2025-02-25 00:37:00 (68871): Status Report: CPU Time: '36968.400000'
2025-02-25 02:17:00 (68871): Status Report: Elapsed Time: '24000.794730'
2025-02-25 02:17:00 (68871): Status Report: CPU Time: '50624.530000'
2025-02-25 03:57:00 (68871): Status Report: Elapsed Time: '30000.794730'
2025-02-25 03:57:00 (68871): Status Report: CPU Time: '64284.960000'
2025-02-25 04:39:16 (68871): Guest Log:  *** Job finished ***
2025-02-25 04:39:17 (68871): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:20,072 | INFO     | [payload] run_realtimelog thread has finished
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:20,512 | INFO     | [job] queue monitor thread has finished
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:21,481 | INFO     | [data] queue_monitor thread has finished
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:23,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140526826555200)>', '<ExcThread(monitor, started 140526540015360)>']
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:23,504 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:23,504 | INFO     | [monitor] control thread has ended
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:28,401 | INFO     | all workflow threads have been joined
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:28,401 | INFO     | end of generic workflow (traces error code: 0)
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:28,401 | INFO     | traces error code: 0
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:28,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:28,736 [wrapper] ==== pilot stdout END ====
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:28,747 [wrapper] ==== wrapper stdout RESUME ====
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:28,871 [wrapper] pilotpid: 5896
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:28,977 [wrapper] Pilot exit status: 0
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:29,592 [wrapper] pandaids: 6523510721
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:30,081 [wrapper] cleanup supervisor_pilot 28251 5897
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:30,237 [wrapper] Test setup, not cleaning
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:31,079 [wrapper] apfmon messages muted
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:31,089 [wrapper] ==== wrapper stdout END ====
2025-02-25 04:39:17 (68871): Guest Log: 2025-02-25 03:39:31,098 [wrapper] ==== wrapper stderr END ====
2025-02-25 04:39:17 (68871): Guest Log:  *** Error codes and diagnostics ***
2025-02-25 04:39:17 (68871): Guest Log:     "exeErrorCode": 0,
2025-02-25 04:39:17 (68871): Guest Log:     "exeErrorDiag": "",
2025-02-25 04:39:17 (68871): Guest Log:     "pilotErrorCode": 0,
2025-02-25 04:39:17 (68871): Guest Log:     "pilotErrorDiag": "",
2025-02-25 04:39:17 (68871): Guest Log:  *** Listing of results directory ***
2025-02-25 04:39:17 (68871): Guest Log: total 323028
2025-02-25 04:39:17 (68871): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 23 01:31 pilot3.tar.gz
2025-02-25 04:39:17 (68871): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 01:44 runpilot2-wrapper.sh
2025-02-25 04:39:17 (68871): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 01:44 queuedata.json
2025-02-25 04:39:17 (68871): Guest Log: -rw-r-----. 1 atlas atlas     17569 Feb 24 18:37 start_atlas.sh
2025-02-25 04:39:17 (68871): Guest Log: -rw-r-----. 1 atlas atlas    503559 Feb 24 18:37 input.tar.gz
2025-02-25 04:39:17 (68871): Guest Log: -rw-r--r--. 1 atlas atlas      7935 Feb 24 18:37 init_data.xml
2025-02-25 04:39:17 (68871): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 24 18:37 EVNT.43078917._000405.pool.root.1 -> /data/./ATLAS.root_0
2025-02-25 04:39:17 (68871): Guest Log: -rw-r--r--. 1 atlas atlas      2543 Feb 24 18:38 pandaJob.out
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas       424 Feb 24 18:38 setup.sh.local
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas    987749 Feb 24 18:40 agis_schedconf.cvmfs.json
2025-02-25 04:39:17 (68871): Guest Log: drwx------. 4 atlas atlas      4096 Feb 24 18:40 pilot3
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas 322286601 Feb 25 03:34 HITS.43078919._090212.pool.root.1
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas      1030 Feb 25 03:37 memory_monitor_summary.json
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 25 03:37 agis_ddmendpoints.agis.ALL.json
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas    394605 Feb 25 03:37 log.43078919._090212.job.log.tgz.1
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas        95 Feb 25 03:38 pilot_heartbeat.json
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas      7709 Feb 25 03:39 heartbeat.json
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 25 03:39 pilotlog.txt
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas   1983053 Feb 25 03:39 log.43078919._090212.job.log.1
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas       357 Feb 25 03:39 output.list
2025-02-25 04:39:17 (68871): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 25 03:39 runtime_log
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas   2396160 Feb 25 03:39 result.tar.gz
2025-02-25 04:39:17 (68871): Guest Log: -rw-------. 1 atlas atlas       671 Feb 25 03:39 vj9MDmYDG66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHsuKDmEh20Dn.diag
2025-02-25 04:39:17 (68871): Guest Log: -rw-r--r--. 1 atlas atlas     10968 Feb 25 03:39 runtime_log.err
2025-02-25 04:39:18 (68871): Guest Log: Looking for outputfile HITS.43078919._090212.pool.root.1
2025-02-25 04:39:18 (68871): Guest Log: HITS file was successfully produced
2025-02-25 04:39:18 (68871): Guest Log: -rw-------. 1 atlas atlas 322286601 Feb 25 03:34 /home/atlas/RunAtlas/HITS.43078919._090212.pool.root.1
2025-02-25 04:39:19 (68871): Guest Log: Successfully finished the ATLAS job!
2025-02-25 04:39:19 (68871): Guest Log: Copying the results back to the shared directory!
2025-02-25 04:39:20 (68871): Guest Log:  *** Contents of shared directory: ***
2025-02-25 04:39:21 (68871): Guest Log: total 335432
2025-02-25 04:39:21 (68871): Guest Log: -rw-rw----. 1 root root 340553094 Feb 24 18:36 ATLAS.root_0
2025-02-25 04:39:21 (68871): Guest Log: -rw-rw-r--. 1 root root      7935 Feb 24 18:36 init_data.xml
2025-02-25 04:39:21 (68871): Guest Log: -rw-rw----. 1 root root    503559 Feb 24 18:36 input.tar.gz
2025-02-25 04:39:21 (68871): Guest Log: -rw-r--r--. 1 root root   2396160 Feb 25 03:39 result.tar.gz
2025-02-25 04:39:21 (68871): Guest Log: -rw-rw----. 1 root root     17569 Feb 24 18:36 start_atlas.sh
2025-02-25 04:39:21 (68871): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-25 04:39:21 (68871): VM Completion File Detected.
2025-02-25 04:39:21 (68871): Powering off VM.
2025-02-25 04:39:21 (68871): Successfully stopped VM.
2025-02-25 04:39:21 (68871): Deregistering VM. (boinc_21a43b106b0967ce, slot#0)
2025-02-25 04:39:21 (68871): Removing network bandwidth throttle group from VM.
2025-02-25 04:39:21 (68871): Removing VM from VirtualBox.
04:39:26 (68871): called boinc_finish(0)

</stderr_txt>
]]>

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