Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:01:57 (13096): wrapper (7.7.26015): starting
03:01:57 (13096): wrapper: running run_atlas (--nthreads 12)
[2025-02-24 03:01:57] Arguments: --nthreads 12
[2025-02-24 03:01:57] Threads: 12
[2025-02-24 03:01:57] Checking for CVMFS
[2025-02-24 03:01:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-24 03:01:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-24 03:01:58] Running cvmfs_config stat atlas.cern.ch
[2025-02-24 03:01:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-24 03:01:59] 2.11.2.0 13457 2430 86036 142994 1 185 23701012 25165824 0 130560 0 25138177 99.995 640116 9932 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-02-24 03:01:59] CVMFS is ok
[2025-02-24 03:01:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 03:01:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 03:01:59] Further information can be found at the LHC@home message board.
[2025-02-24 03:01:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 03:01:59] Checking for apptainer binary...
[2025-02-24 03:01:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-24 03:01:59] Running /usr/bin/apptainer --version
[2025-02-24 03:01:59] apptainer version 1.3.2-1.el7
[2025-02-24 03:01:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 03:02:03] cg-vwn116.simple-grid.lan
[2025-02-24 03:02:03] apptainer works
[2025-02-24 03:02:03] Set ATHENA_PROC_NUMBER=12
[2025-02-24 03:02:03] Set ATHENA_CORE_NUMBER=12
[2025-02-24 03:02:03] Starting ATLAS job with PandaID=6527476564
[2025-02-24 03:02:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 03:10:59]  *** The last 200 lines of the pilot log: ***
[2025-02-24 03:10:59] 2025-02-24 02:10:44,038 | INFO     | monitor loop #141: job 0:6527476564 is in state 'failed'
[2025-02-24 03:10:59] 2025-02-24 02:10:44,038 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-24 03:10:59] 2025-02-24 02:10:45,421 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-24 03:10:59] 2025-02-24 02:10:45,423 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6527476564/memory_monitor_output.txt
[2025-02-24 03:10:59] 2025-02-24 02:10:45,423 | INFO     | memory summary dictionary not yet available
[2025-02-24 03:10:59] 2025-02-24 02:10:45,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-24 03:10:59] 2025-02-24 02:10:45,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-24 03:10:59] 2025-02-24 02:10:45,427 | INFO     | ..............................
[2025-02-24 03:10:59] 2025-02-24 02:10:45,427 | INFO     | . Timing measurements:
[2025-02-24 03:10:59] 2025-02-24 02:10:45,428 | INFO     | . get job = 0 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,429 | INFO     | . initial setup = 2 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,429 | INFO     | . payload setup = 25 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,429 | INFO     | . stage-in = 0 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,430 | INFO     | . payload execution = 224 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,430 | INFO     | . stage-out = 0 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,430 | INFO     | . log creation = 0 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,431 | INFO     | ..............................
[2025-02-24 03:10:59] 2025-02-24 02:10:45,431 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-24 03:10:59] 2025-02-24 02:10:45,432 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6527476564/pilotlog.txt
[2025-02-24 03:10:59] 2025-02-24 02:10:45,487 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-02-24 03:10:59] - Log from pilotlog.txt -
[2025-02-24 03:10:59] 2025-02-24 02:10:41,532 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-24 03:10:59] 2025-02-24 02:10:44,038 | INFO     | monitor loop #141: job 0:6527476564 is in state 'failed'
[2025-02-24 03:10:59] 2025-02-24 02:10:44,038 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-24 03:10:59] 2025-02-24 02:10:45,421 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-24 03:10:59] 2025-02-24 02:10:45,423 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6527476564/memory_monitor_output.txt
[2025-02-24 03:10:59] 2025-02-24 02:10:45,423 | INFO     | memory summary dictionary not yet available
[2025-02-24 03:10:59] 2025-02-24 02:10:45,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-24 03:10:59] 2025-02-24 02:10:45,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-24 03:10:59] 2025-02-24 02:10:45,427 | INFO     | ..............................
[2025-02-24 03:10:59] 2025-02-24 02:10:45,427 | INFO     | . Timing measurements:
[2025-02-24 03:10:59] 2025-02-24 02:10:45,428 | INFO     | . get job = 0 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,429 | INFO     | . initial setup = 2 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,429 | INFO     | . payload setup = 25 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,429 | INFO     | . stage-in = 0 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,430 | INFO     | . payload execution = 224 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,430 | INFO     | . stage-out = 0 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,430 | INFO     | . log creation = 0 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,431 | INFO     | ..............................
[2025-02-24 03:10:59] 2025-02-24 02:10:45,431 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-24 03:10:59] 2025-02-24 02:10:45,432 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6527476564/pilotlog.txt
[2025-02-24 03:10:59] 2025-02-24 02:10:45,488 | WARNING  | 
[2025-02-24 03:10:59] [begin log extracts]
[2025-02-24 03:10:59] - Log from pilotlog.txt -
[2025-02-24 03:10:59] 2025-02-24 02:10:41,532 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-24 03:10:59] 2025-02-24 02:10:44,038 | INFO     | monitor loop #141: job 0:6527476564 is in state 'failed'
[2025-02-24 03:10:59] 2025-02-24 02:10:44,038 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-24 03:10:59] 2025-02-24 02:10:45,421 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-24 03:10:59] 2025-02-24 02:10:45,423 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6527476564/memory_monitor_output.txt
[2025-02-24 03:10:59] 2025-02-24 02:10:45,423 | INFO     | memory summary dictionary not yet available
[2025-02-24 03:10:59] 2025-02-24 02:10:45,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-24 03:10:59] 2025-02-24 02:10:45,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-24 03:10:59] 2025-02-24 02:10:45,427 | INFO     | ..............................
[2025-02-24 03:10:59] 2025-02-24 02:10:45,427 | INFO     | . Timing measurements:
[2025-02-24 03:10:59] 2025-02-24 02:10:45,428 | INFO     | . get job = 0 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,429 | INFO     | . initial setup = 2 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,429 | INFO     | . payload setup = 25 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,429 | INFO     | . stage-in = 0 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,430 | INFO     | . payload execution = 224 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,430 | INFO     | . stage-out = 0 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,430 | INFO     | . log creation = 0 s
[2025-02-24 03:10:59] 2025-02-24 02:10:45,431 | INFO     | ..............................
[2025-02-24 03:10:59] 2025-02-24 02:10:45,431 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-24 03:10:59] 2025-02-24 02:10:45,432 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6527476564/pilotlog.txt
[2025-02-24 03:10:59] [end log extracts]
[2025-02-24 03:10:59] 2025-02-24 02:10:45,489 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-02-24 03:10:59] 2025-02-24 02:10:45,489 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2025-02-24 02:07:21,256 CRITICAL Transform executor raised TransformValidationExcep
[2025-02-24 03:10:59] 2025-02-24 02:10:46,131 | INFO     | 
[2025-02-24 03:10:59] 2025-02-24 02:10:46,132 | INFO     | job summary report
[2025-02-24 03:10:59] 2025-02-24 02:10:46,132 | INFO     | --------------------------------------------------
[2025-02-24 03:10:59] 2025-02-24 02:10:46,133 | INFO     | PanDA job id: 6527476564
[2025-02-24 03:10:59] 2025-02-24 02:10:46,133 | INFO     | task id: 43205094
[2025-02-24 03:10:59] 2025-02-24 02:10:46,133 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-02-24 02:07:21,256 CRITICAL Transform executor raised TransformValidationExceptio
[2025-02-24 03:10:59] 2025-02-24 02:10:46,134 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 03:10:59] 2025-02-24 02:10:46,135 | INFO     | pilot state: failed 
[2025-02-24 03:10:59] 2025-02-24 02:10:46,135 | INFO     | transexitcode: 65
[2025-02-24 03:10:59] 2025-02-24 02:10:46,136 | INFO     | exeerrorcode: 65
[2025-02-24 03:10:59] 2025-02-24 02:10:46,136 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-02-24 03:10:59] 2025-02-24 02:10:46,136 | INFO     | exitcode: 65
[2025-02-24 03:10:59] 2025-02-24 02:10:46,137 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-02-24 03:10:59] 2025-02-24 02:10:46,137 | INFO     | cpuconsumptiontime: 261 s
[2025-02-24 03:10:59] 2025-02-24 02:10:46,137 | INFO     | nevents: 0
[2025-02-24 03:10:59] 2025-02-24 02:10:46,138 | INFO     | neventsw: 0
[2025-02-24 03:10:59] 2025-02-24 02:10:46,138 | INFO     | pid: 23318
[2025-02-24 03:10:59] 2025-02-24 02:10:46,138 | INFO     | pgrp: 23318
[2025-02-24 03:10:59] 2025-02-24 02:10:46,139 | INFO     | corecount: 12
[2025-02-24 03:10:59] 2025-02-24 02:10:46,139 | INFO     | event service: False
[2025-02-24 03:10:59] 2025-02-24 02:10:46,139 | INFO     | sizes: {0: 2383186, 1: 2383385, 2: 2383385, 12: 2383413, 16: 2383647, 23: 2383675, 314: 2407197, 315: 2411491, 449: 2411605}
[2025-02-24 03:10:59] 2025-02-24 02:10:46,140 | INFO     | --------------------------------------------------
[2025-02-24 03:10:59] 2025-02-24 02:10:46,140 | INFO     | 
[2025-02-24 03:10:59] 2025-02-24 02:10:46,141 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-02-24 03:10:59] 2025-02-24 02:10:46,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,226 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,227 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,227 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,228 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,231 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,232 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 03:10:59] 2025-02-24 02:10:46,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 03:10:59] 2025-02-24 02:10:46,234 | INFO     | job 6527476564 has completed (purged errors)
[2025-02-24 03:10:59] 2025-02-24 02:10:46,234 | INFO     | overall cleanup function is called
[2025-02-24 03:10:59] 2025-02-24 02:10:47,243 | INFO     | --- collectZombieJob: --- 10, [23318]
[2025-02-24 03:10:59] 2025-02-24 02:10:47,244 | INFO     | zombie collector waiting for pid 23318
[2025-02-24 03:10:59] 2025-02-24 02:10:47,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 03:10:59] 2025-02-24 02:10:47,245 | INFO     | collected zombie processes
[2025-02-24 03:10:59] 2025-02-24 02:10:47,245 | INFO     | will attempt to kill all subprocesses of pid=23318
[2025-02-24 03:10:59] 2025-02-24 02:10:47,362 | INFO     | 491s have passed since pilot start
[2025-02-24 03:10:59] 2025-02-24 02:10:47,408 | INFO     | process IDs to be killed: [23318] (in reverse order)
[2025-02-24 03:10:59] 2025-02-24 02:10:47,552 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 03:10:59] 2025-02-24 02:10:47,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 03:10:59] 2025-02-24 02:10:47,559 | INFO     | did not find any defunct processes belonging to 23318
[2025-02-24 03:10:59] 2025-02-24 02:10:47,566 | INFO     | did not find any defunct processes belonging to 23318
[2025-02-24 03:10:59] 2025-02-24 02:10:47,567 | INFO     | ready for new job
[2025-02-24 03:10:59] 2025-02-24 02:10:47,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 03:10:59] 2025-02-24 02:10:47,571 | INFO     | **************************************
[2025-02-24 03:10:59] 2025-02-24 02:10:47,572 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 03:10:59] 2025-02-24 02:10:47,572 | INFO     | **************************************
[2025-02-24 03:10:59] 2025-02-24 02:10:47,572 | INFO     | 
[2025-02-24 03:10:59] 2025-02-24 02:10:47,574 | INFO     | pilot is running in a VM
[2025-02-24 03:10:59] 2025-02-24 02:10:47,575 | INFO     | architecture information:
[2025-02-24 03:10:59] 2025-02-24 02:10:47,576 | INFO     | executing command: cat /etc/os-release
[2025-02-24 03:10:59] 2025-02-24 02:10:47,637 | INFO     | cat /etc/os-release:
[2025-02-24 03:10:59] NAME="CentOS Linux"
[2025-02-24 03:10:59] VERSION="7 (Core)"
[2025-02-24 03:10:59] ID="centos"
[2025-02-24 03:10:59] ID_LIKE="rhel fedora"
[2025-02-24 03:10:59] VERSION_ID="7"
[2025-02-24 03:10:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 03:10:59] ANSI_COLOR="0;31"
[2025-02-24 03:10:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 03:10:59] HOME_URL="https://www.centos.org/"
[2025-02-24 03:10:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 03:10:59] 
[2025-02-24 03:10:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 03:10:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 03:10:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 03:10:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 03:10:59] 
[2025-02-24 03:10:59] 2025-02-24 02:10:47,638 | INFO     | **************************************
[2025-02-24 03:10:59] 2025-02-24 02:10:48,142 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-02-24 03:10:59] 2025-02-24 02:10:48,206 | INFO     | sufficient remaining disk space (256038141952 B)
[2025-02-24 03:10:59] 2025-02-24 02:10:48,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 03:10:59] 2025-02-24 02:10:48,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 03:10:59] 2025-02-24 02:10:48,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 03:10:59] 2025-02-24 02:10:48,210 | INFO     | aborting loop
[2025-02-24 03:10:59] 2025-02-24 02:10:48,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 03:10:59] 2025-02-24 02:10:48,453 | INFO     | all data control threads have been joined
[2025-02-24 03:10:59] 2025-02-24 02:10:48,549 | INFO     | PID=16872 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-24 03:10:59] 2025-02-24 02:10:48,549 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 03:10:59] 2025-02-24 02:10:48,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 03:10:59] 2025-02-24 02:10:48,549 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 03:10:59] 2025-02-24 02:10:48,762 | INFO     | all payload control threads have been joined
[2025-02-24 03:10:59] 2025-02-24 02:10:48,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 03:10:59] 2025-02-24 02:10:49,215 | INFO     | [job] retrieve thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:49,216 | INFO     | [job] job monitor thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:49,281 | INFO     | all job control threads have been joined
[2025-02-24 03:10:59] 2025-02-24 02:10:49,377 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:49,461 | INFO     | [data] control thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:49,768 | INFO     | [payload] control thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:49,856 | INFO     | [payload] failed_post thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:50,005 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:50,035 | INFO     | [payload] validate_post thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:50,164 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:50,168 | INFO     | [data] copytool_in thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:50,185 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:50,217 | INFO     | [data] copytool_out thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:50,288 | INFO     | [job] control thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:50,374 | INFO     | [job] validate thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:50,697 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 03:10:59] 2025-02-24 02:10:51,703 | INFO     | [job] queue monitor thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:52,942 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 03:10:59] 2025-02-24 02:10:53,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966572025664)>', '<ExcThread(monitor, started 139965333763840)>']
[2025-02-24 03:10:59] 2025-02-24 02:10:54,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 03:10:59] 2025-02-24 02:10:54,582 | INFO     | [monitor] control thread has ended
[2025-02-24 03:10:59] 2025-02-24 02:10:58,737 | INFO     | all workflow threads have been joined
[2025-02-24 03:10:59] 2025-02-24 02:10:58,738 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 03:10:59] 2025-02-24 02:10:58,739 | INFO     | traces error code: 0
[2025-02-24 03:10:59] 2025-02-24 02:10:58,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 03:10:59] 2025-02-24 02:10:58,989 [wrapper] ==== pilot stdout END ====
[2025-02-24 03:10:59] 2025-02-24 02:10:59,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 03:10:59] 2025-02-24 02:10:59,016 [wrapper] pilotpid: 16872
[2025-02-24 03:10:59] 2025-02-24 02:10:59,030 [wrapper] Pilot exit status: 0
[2025-02-24 03:10:59] 2025-02-24 02:10:59,079 [wrapper] pandaids: 6527476564
[2025-02-24 03:10:59] 2025-02-24 02:10:59,184 [wrapper] cleanup supervisor_pilot 16878 16873
[2025-02-24 03:10:59] 2025-02-24 02:10:59,197 [wrapper] Test setup, not cleaning
[2025-02-24 03:10:59] 2025-02-24 02:10:59,222 [wrapper] apfmon messages muted
[2025-02-24 03:10:59] 2025-02-24 02:10:59,235 [wrapper] ==== wrapper stdout END ====
[2025-02-24 03:10:59] 2025-02-24 02:10:59,248 [wrapper] ==== wrapper stderr END ====
[2025-02-24 03:10:59]  *** Error codes and diagnostics ***
[2025-02-24 03:10:59]     "exeErrorCode": 65,
[2025-02-24 03:10:59]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-02-24 03:10:59]     "pilotErrorCode": 1305,
[2025-02-24 03:10:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2025-02-24 02:07:21,256 CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-02-24 03:10:59]  *** Listing of results directory ***
[2025-02-24 03:10:59] total 337116
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc    491065 Feb 23 19:48 pilot3.tar.gz
[2025-02-24 03:10:59] -rwx------. 1 boinc boinc     35865 Feb 23 19:59 runpilot2-wrapper.sh
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc      5118 Feb 23 19:59 queuedata.json
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc       100 Feb 24 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 03:10:59] -rwxr-xr-x. 1 boinc boinc      7986 Feb 24 03:01 run_atlas
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc       105 Feb 24 03:01 job.xml
[2025-02-24 03:10:59] -rw-r--r--. 2 boinc boinc 341032777 Feb 24 03:01 EVNT.43092757._001475.pool.root.1
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc      6119 Feb 24 03:01 init_data.xml
[2025-02-24 03:10:59] -rw-r--r--. 2 boinc boinc     17569 Feb 24 03:01 start_atlas.sh
[2025-02-24 03:10:59] drwxrwx--x. 2 boinc boinc        68 Feb 24 03:01 shared
[2025-02-24 03:10:59] -rw-r--r--. 2 boinc boinc    503556 Feb 24 03:01 input.tar.gz
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc         0 Feb 24 03:01 boinc_lockfile
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc      2547 Feb 24 03:02 pandaJob.out
[2025-02-24 03:10:59] -rw-------. 1 boinc boinc       424 Feb 24 03:02 setup.sh.local
[2025-02-24 03:10:59] -rw-------. 1 boinc boinc    987744 Feb 24 03:02 agis_schedconf.cvmfs.json
[2025-02-24 03:10:59] -rw-------. 1 boinc boinc   1582569 Feb 24 03:02 agis_ddmendpoints.agis.ALL.json
[2025-02-24 03:10:59] drwx------. 4 boinc boinc      4096 Feb 24 03:02 pilot3
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc       525 Feb 24 03:07 boinc_task_state.xml
[2025-02-24 03:10:59] -rw-------. 1 boinc boinc     47737 Feb 24 03:08 log.43205094._040049.job.log.tgz.1
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc      8192 Feb 24 03:10 boinc_mmap_file
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc        24 Feb 24 03:10 wrapper_checkpoint.txt
[2025-02-24 03:10:59] -rw-------. 1 boinc boinc        95 Feb 24 03:10 pilot_heartbeat.json
[2025-02-24 03:10:59] -rw-------. 1 boinc boinc      8059 Feb 24 03:10 heartbeat.json
[2025-02-24 03:10:59] -rw-------. 1 boinc boinc      4595 Feb 24 03:10 pilotlog.txt
[2025-02-24 03:10:59] -rw-------. 1 boinc boinc    144719 Feb 24 03:10 log.43205094._040049.job.log.1
[2025-02-24 03:10:59] -rw-------. 1 boinc boinc       188 Feb 24 03:10 output.list
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc       620 Feb 24 03:10 runtime_log
[2025-02-24 03:10:59] -rw-------. 1 boinc boinc    215040 Feb 24 03:10 result.tar.gz
[2025-02-24 03:10:59] -rw-------. 1 boinc boinc       640 Feb 24 03:10 wHBODmBNW66n9Rq4apOajLDm4fhM0noT9bVoFjIUDm17eKDmGFvJ3m.diag
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc     10861 Feb 24 03:10 runtime_log.err
[2025-02-24 03:10:59] -rw-r--r--. 1 boinc boinc     21895 Feb 24 03:10 stderr.txt
[2025-02-24 03:10:59] No HITS result produced
[2025-02-24 03:10:59]  *** Contents of shared directory: ***
[2025-02-24 03:10:59] total 333764
[2025-02-24 03:10:59] -rw-r--r--. 2 boinc boinc 341032777 Feb 24 03:01 ATLAS.root_0
[2025-02-24 03:10:59] -rw-r--r--. 2 boinc boinc     17569 Feb 24 03:01 start_atlas.sh
[2025-02-24 03:10:59] -rw-r--r--. 2 boinc boinc    503556 Feb 24 03:01 input.tar.gz
[2025-02-24 03:10:59] -rw-------. 1 boinc boinc    215040 Feb 24 03:10 result.tar.gz
03:11:01 (13096): run_atlas exited; CPU time 196.231370
03:11:01 (13096): called boinc_finish(0)

</stderr_txt>
]]>

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