Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 18:16:31 (18196): Detected: vboxwrapper 26206
2025-02-23 18:16:31 (18196): Detected: BOINC client v8.0.2
2025-02-23 18:16:32 (18196): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-02-23 18:16:32 (18196): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 18:16:33 (18196): Create VM. (boinc_adbef9a738cfa7d3, slot#3)
2025-02-23 18:16:33 (18196): Setting Memory Size for VM. (4400MB)
2025-02-23 18:16:33 (18196): Setting CPU Count for VM. (4)
2025-02-23 18:16:34 (18196): Setting Chipset Options for VM.
2025-02-23 18:16:34 (18196): Setting Graphics Controller Options for VM.
2025-02-23 18:16:34 (18196): Setting Boot Options for VM.
2025-02-23 18:16:34 (18196): Setting Network Configuration for NAT.
2025-02-23 18:16:35 (18196): Enabling VM Network Access.
2025-02-23 18:16:35 (18196): Disabling USB Support for VM.
2025-02-23 18:16:35 (18196): Disabling COM Port Support for VM.
2025-02-23 18:16:35 (18196): Disabling LPT Port Support for VM.
2025-02-23 18:16:36 (18196): Disabling Audio Support for VM.
2025-02-23 18:16:36 (18196): Disabling Clipboard Support for VM.
2025-02-23 18:16:36 (18196): Disabling Drag and Drop Support for VM.
2025-02-23 18:16:36 (18196): Adding storage controller(s) to VM.
2025-02-23 18:16:37 (18196): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 18:16:37 (18196): Adding VirtualBox Guest Additions to VM.
2025-02-23 18:16:37 (18196): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 18:16:38 (18196): forwarding host port 59219 to guest port 80
2025-02-23 18:16:38 (18196): Enabling remote desktop for VM.
2025-02-23 18:16:38 (18196): Required extension pack not installed, remote desktop not enabled.
2025-02-23 18:16:38 (18196): Enabling shared directory for VM.
2025-02-23 18:16:39 (18196): Starting VM using VBoxManage interface. (boinc_adbef9a738cfa7d3, slot#3)
2025-02-23 18:16:43 (18196): Successfully started VM. (PID = '31100')
2025-02-23 18:16:43 (18196): Reporting VM Process ID to BOINC.
2025-02-23 18:16:43 (18196): Guest Log: BIOS: VirtualBox 7.1.4
2025-02-23 18:16:43 (18196): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 18:16:43 (18196): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 18:16:43 (18196): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 18:16:43 (18196): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 18:16:43 (18196): Detected: Web Application Enabled (http://localhost:59219)
2025-02-23 18:16:43 (18196): Preference change detected
2025-02-23 18:16:43 (18196): Setting CPU throttle for VM. (100%)
2025-02-23 18:16:43 (18196): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 18:16:45 (18196): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 18:16:45 (18196): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 18:16:47 (18196): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 18:16:47 (18196): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 18:16:47 (18196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 18:16:54 (18196): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 18:16:54 (18196): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 18:17:01 (18196): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 18:17:01 (18196): Guest Log: 00:00:00.000103 main     Log opened 2025-02-23T18:17:00.625954000Z
2025-02-23 18:17:01 (18196): Guest Log: 00:00:00.000181 main     OS Product: Linux
2025-02-23 18:17:01 (18196): Guest Log: 00:00:00.000209 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 18:17:01 (18196): Guest Log: 00:00:00.000230 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 18:17:01 (18196): Guest Log: 00:00:00.000249 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 18:17:01 (18196): Guest Log: 00:00:00.000250 main     Process ID: 1306
2025-02-23 18:17:01 (18196): Guest Log: 00:00:00.000250 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 18:17:01 (18196): Guest Log: 00:00:00.008359 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 18:17:01 (18196): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 18:17:01 (18196): Guest Log: [INFO] Mounting shared directory
2025-02-23 18:17:01 (18196): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 18:17:05 (18196): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 18:17:05 (18196): Guest Log: [INFO] Detected branch: prod
2025-02-23 18:17:05 (18196): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 18:17:05 (18196): Guest Log: Copying input files
2025-02-23 18:17:07 (18196): Guest Log: Copied input files into RunAtlas.
2025-02-23 18:17:07 (18196): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 18:17:07 (18196): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 18:17:07 (18196): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 18:17:07 (18196): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 18:17:11 (18196): Guest Log: 00:00:10.029213 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 609 699 000ns (GuestNow=1 740 352 631 247 364 000 ns GuestLast=1 740 334 620 637 665 000 ns fSetTimeLastLoop=true )
2025-02-23 18:17:14 (18196): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 18:17:14 (18196): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 18:17:14 (18196): Guest Log: 2.6.3.0 1603 0 32172 142992 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 18:17:15 (18196): Guest Log: copied the webapp to /var/www
2025-02-23 18:17:15 (18196): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-23 18:17:15 (18196): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-23 18:17:15 (18196): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 18:17:15 (18196): Guest Log:  *** Starting ATLAS job. (PandaID=6526915453 taskID=43078919) ***
2025-02-23 18:32:37 (18196): Guest Log:  *** Job finished ***
2025-02-23 18:32:37 (18196): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:22,943 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:24,344 | INFO     | [data] copytool_out thread has finished
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:27,032 | INFO     | [data] queue_monitor thread has finished
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:28,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794499458880)>', '<ExcThread(monitor, started 139793803507456)>']
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:29,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:29,041 | INFO     | [monitor] control thread has ended
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:33,997 | INFO     | all workflow threads have been joined
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:33,997 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:33,997 | INFO     | traces error code: 0
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:33,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:34,056 [wrapper] ==== pilot stdout END ====
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:34,067 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:34,077 [wrapper] pilotpid: 5908
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:34,090 [wrapper] Pilot exit status: 0
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:34,167 [wrapper] pandaids: 6526915453
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:34,244 [wrapper] cleanup supervisor_pilot  5914 5909
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:34,257 [wrapper] Test setup, not cleaning
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:34,282 [wrapper] apfmon messages muted
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:34,293 [wrapper] ==== wrapper stdout END ====
2025-02-23 18:32:37 (18196): Guest Log: 2025-02-23 23:32:34,299 [wrapper] ==== wrapper stderr END ====
2025-02-23 18:32:37 (18196): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 18:32:37 (18196): Guest Log:     "exeErrorCode": 65,
2025-02-23 18:32:37 (18196): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitialize(): standard std::exception is caught\"",
2025-02-23 18:32:37 (18196): Guest Log:     "pilotErrorCode": 1305,
2025-02-23 18:32:37 (18196): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 23:30:01,570 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitia",
2025-02-23 18:32:37 (18196): Guest Log:  *** Listing of results directory ***
2025-02-23 18:32:37 (18196): Guest Log: total 4004
2025-02-23 18:32:37 (18196): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Feb 23 16:49 pilot3.tar.gz
2025-02-23 18:32:37 (18196): Guest Log: -rw-r--r--. 1 atlas atlas    5118 Feb 23 17:08 queuedata.json
2025-02-23 18:32:37 (18196): Guest Log: -rwx------. 1 atlas atlas   35865 Feb 23 17:08 runpilot2-wrapper.sh
2025-02-23 18:32:37 (18196): Guest Log: -rwxr-xr-x. 1 atlas atlas   10793 Feb 23 23:17 init_data.xml
2025-02-23 18:32:37 (18196): Guest Log: -rwxr-xr-x. 1 atlas atlas  503565 Feb 23 23:17 input.tar.gz
2025-02-23 18:32:37 (18196): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Feb 23 23:17 start_atlas.sh
2025-02-23 18:32:37 (18196): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb 23 23:17 EVNT.43078917._001605.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 18:32:37 (18196): Guest Log: -rw-r--r--. 1 atlas atlas    2548 Feb 23 23:17 pandaJob.out
2025-02-23 18:32:37 (18196): Guest Log: -rw-------. 1 atlas atlas     424 Feb 23 23:17 setup.sh.local
2025-02-23 18:32:37 (18196): Guest Log: -rw-------. 1 atlas atlas  987744 Feb 23 23:17 agis_schedconf.cvmfs.json
2025-02-23 18:32:37 (18196): Guest Log: -rw-------. 1 atlas atlas 1582569 Feb 23 23:18 agis_ddmendpoints.agis.ALL.json
2025-02-23 18:32:37 (18196): Guest Log: drwx------. 4 atlas atlas    4096 Feb 23 23:18 pilot3
2025-02-23 18:32:37 (18196): Guest Log: -rw-------. 1 atlas atlas    1011 Feb 23 23:30 memory_monitor_summary.json
2025-02-23 18:32:37 (18196): Guest Log: -rw-------. 1 atlas atlas   48456 Feb 23 23:30 log.43078919._091927.job.log.tgz.1
2025-02-23 18:32:37 (18196): Guest Log: -rw-------. 1 atlas atlas      95 Feb 23 23:31 pilot_heartbeat.json
2025-02-23 18:32:37 (18196): Guest Log: -rw-------. 1 atlas atlas   11768 Feb 23 23:32 heartbeat.json
2025-02-23 18:32:37 (18196): Guest Log: -rw-------. 1 atlas atlas    4398 Feb 23 23:32 pilotlog.txt
2025-02-23 18:32:37 (18196): Guest Log: -rw-------. 1 atlas atlas  128692 Feb 23 23:32 log.43078919._091927.job.log.1
2025-02-23 18:32:37 (18196): Guest Log: -rw-------. 1 atlas atlas     188 Feb 23 23:32 output.list
2025-02-23 18:32:37 (18196): Guest Log: -rw-r--r--. 1 atlas atlas     620 Feb 23 23:32 runtime_log
2025-02-23 18:32:37 (18196): Guest Log: -rw-------. 1 atlas atlas  204800 Feb 23 23:32 result.tar.gz
2025-02-23 18:32:37 (18196): Guest Log: -rw-r--r--. 1 atlas atlas   10748 Feb 23 23:32 runtime_log.err
2025-02-23 18:32:37 (18196): Guest Log: -rw-------. 1 atlas atlas     631 Feb 23 23:32 2x1MDmrdU66n9Rq4apOajLDm4fhM0noT9bVoFjIUDm05eKDmTIaNbn.diag
2025-02-23 18:32:37 (18196): Guest Log: Looking for outputfile HITS.43078919._091927.pool.root.1
2025-02-23 18:32:37 (18196): Guest Log: No HITS file was produced
2025-02-23 18:32:37 (18196): Guest Log: Successfully finished the ATLAS job!
2025-02-23 18:32:37 (18196): Guest Log: Copying the results back to the shared directory!
2025-02-23 18:32:37 (18196): Guest Log:  *** Contents of shared directory: ***
2025-02-23 18:32:37 (18196): Guest Log: total 335740
2025-02-23 18:32:37 (18196): Guest Log: -rwxrwxrwx. 1 root root 343053856 Feb 23 23:16 ATLAS.root_0
2025-02-23 18:32:37 (18196): Guest Log: -rwxrwxrwx. 1 root root     10793 Feb 23 23:16 init_data.xml
2025-02-23 18:32:37 (18196): Guest Log: -rwxrwxrwx. 1 root root    503565 Feb 23 23:16 input.tar.gz
2025-02-23 18:32:37 (18196): Guest Log: -rwxrwxrwx. 1 root root    204800 Feb 23 23:32 result.tar.gz
2025-02-23 18:32:37 (18196): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 23:16 start_atlas.sh
2025-02-23 18:32:37 (18196): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 18:32:37 (18196): VM Completion File Detected.
2025-02-23 18:32:37 (18196): Powering off VM.
2025-02-23 18:32:37 (18196): Successfully stopped VM.
2025-02-23 18:32:37 (18196): Deregistering VM. (boinc_adbef9a738cfa7d3, slot#3)
2025-02-23 18:32:37 (18196): Removing network bandwidth throttle group from VM.
2025-02-23 18:32:38 (18196): Removing VM from VirtualBox.
18:32:43 (18196): called boinc_finish(0)

</stderr_txt>
]]>

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