Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 17:18:58 (6432): Detected: vboxwrapper 26206
2025-02-23 17:18:58 (6432): Detected: BOINC client v8.0.4
2025-02-23 17:18:58 (6432): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-23 17:18:59 (6432): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 17:18:59 (6432): Create VM. (boinc_eb345ec3373c47ae, slot#0)
2025-02-23 17:19:00 (6432): Setting Memory Size for VM. (4400MB)
2025-02-23 17:19:00 (6432): Setting CPU Count for VM. (4)
2025-02-23 17:19:00 (6432): Setting Chipset Options for VM.
2025-02-23 17:19:00 (6432): Setting Graphics Controller Options for VM.
2025-02-23 17:19:01 (6432): Setting Boot Options for VM.
2025-02-23 17:19:01 (6432): Setting Network Configuration for NAT.
2025-02-23 17:19:01 (6432): Enabling VM Network Access.
2025-02-23 17:19:01 (6432): Disabling USB Support for VM.
2025-02-23 17:19:02 (6432): Disabling COM Port Support for VM.
2025-02-23 17:19:02 (6432): Disabling LPT Port Support for VM.
2025-02-23 17:19:02 (6432): Disabling Audio Support for VM.
2025-02-23 17:19:02 (6432): Disabling Clipboard Support for VM.
2025-02-23 17:19:03 (6432): Disabling Drag and Drop Support for VM.
2025-02-23 17:19:03 (6432): Adding storage controller(s) to VM.
2025-02-23 17:19:03 (6432): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 17:19:04 (6432): Adding VirtualBox Guest Additions to VM.
2025-02-23 17:19:04 (6432): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 17:19:04 (6432): forwarding host port 58624 to guest port 80
2025-02-23 17:19:05 (6432): Enabling remote desktop for VM.
2025-02-23 17:19:05 (6432): Required extension pack not installed, remote desktop not enabled.
2025-02-23 17:19:05 (6432): Enabling shared directory for VM.
2025-02-23 17:19:05 (6432): Starting VM using VBoxManage interface. (boinc_eb345ec3373c47ae, slot#0)
2025-02-23 17:19:10 (6432): Successfully started VM. (PID = '9576')
2025-02-23 17:19:10 (6432): Reporting VM Process ID to BOINC.
2025-02-23 17:19:10 (6432): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-23 17:19:10 (6432): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 17:19:10 (6432): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 17:19:10 (6432): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 17:19:10 (6432): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 17:19:10 (6432): Detected: Web Application Enabled (http://localhost:58624)
2025-02-23 17:19:10 (6432): Preference change detected
2025-02-23 17:19:10 (6432): Setting CPU throttle for VM. (60%)
2025-02-23 17:19:10 (6432): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 17:19:12 (6432): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 17:19:12 (6432): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 17:19:15 (6432): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 17:19:15 (6432): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 17:19:15 (6432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 17:19:27 (6432): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 17:19:27 (6432): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 17:19:42 (6432): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 17:19:42 (6432): Guest Log: 00:00:00.000191 main     Log opened 2025-02-23T17:19:40.468504000Z
2025-02-23 17:19:42 (6432): Guest Log: 00:00:00.000324 main     OS Product: Linux
2025-02-23 17:19:42 (6432): Guest Log: 00:00:00.000361 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 17:19:42 (6432): Guest Log: 00:00:00.000412 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 17:19:42 (6432): Guest Log: 00:00:00.000442 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 17:19:42 (6432): Guest Log: 00:00:00.000442 main     Process ID: 1300
2025-02-23 17:19:42 (6432): Guest Log: 00:00:00.000443 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 17:19:42 (6432): Guest Log: 00:00:00.004524 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 17:19:42 (6432): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 17:19:42 (6432): Guest Log: [INFO] Mounting shared directory
2025-02-23 17:19:42 (6432): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 17:19:45 (6432): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 17:19:45 (6432): Guest Log: [INFO] Detected branch: prod
2025-02-23 17:19:45 (6432): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 17:19:45 (6432): Guest Log: Copying input files
2025-02-23 17:19:48 (6432): Guest Log: Copied input files into RunAtlas.
2025-02-23 17:19:48 (6432): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 17:19:48 (6432): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 17:19:48 (6432): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 17:19:48 (6432): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 17:19:52 (6432): Guest Log: 00:00:10.028829 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 344 502 000ns (GuestNow=1 740 349 191 825 799 000 ns GuestLast=1 740 331 180 481 297 000 ns fSetTimeLastLoop=true )
2025-02-23 17:19:59 (6432): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 17:19:59 (6432): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 17:19:59 (6432): Guest Log: 2.6.3.0 1579 0 32192 142990 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 17:20:01 (6432): Guest Log: copied the webapp to /var/www
2025-02-23 17:20:01 (6432): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-23 17:20:01 (6432): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-23 17:20:01 (6432): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 17:20:01 (6432): Guest Log:  *** Starting ATLAS job. (PandaID=6523360872 taskID=43078919) ***
2025-02-23 18:59:15 (6432): Status Report: Elapsed Time: '6000.000000'
2025-02-23 18:59:15 (6432): Status Report: CPU Time: '9599.500000'
2025-02-23 20:39:20 (6432): Status Report: Elapsed Time: '12000.000000'
2025-02-23 20:39:20 (6432): Status Report: CPU Time: '21660.890625'
2025-02-23 22:19:25 (6432): Status Report: Elapsed Time: '18000.000000'
2025-02-23 22:19:25 (6432): Status Report: CPU Time: '34360.375000'
2025-02-23 23:59:29 (6432): Status Report: Elapsed Time: '24000.000000'
2025-02-23 23:59:29 (6432): Status Report: CPU Time: '46771.218750'
2025-02-24 01:39:34 (6432): Status Report: Elapsed Time: '30000.000000'
2025-02-24 01:39:34 (6432): Status Report: CPU Time: '58627.203125'
2025-02-24 03:19:39 (6432): Status Report: Elapsed Time: '36000.000000'
2025-02-24 03:19:39 (6432): Status Report: CPU Time: '70496.093750'
2025-02-24 03:56:04 (6432): Guest Log:  *** Job finished ***
2025-02-24 03:56:04 (6432): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:55:50,845 | INFO     | [job] queue monitor thread has finished
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:55:50,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:55:54,891 | INFO     | [data] queue_monitor thread has finished
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:55:56,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140170628884288)>', '<ExcThread(monitor, started 140169671862016)>']
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:55:57,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:55:57,566 | INFO     | [monitor] control thread has ended
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:01,988 | INFO     | all workflow threads have been joined
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:01,988 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:01,988 | INFO     | traces error code: 0
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:01,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:02,157 [wrapper] ==== pilot stdout END ====
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:02,174 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:02,192 [wrapper] pilotpid: 5921
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:02,207 [wrapper] Pilot exit status: 0
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:02,303 [wrapper] pandaids: 6523360872
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:02,445 [wrapper] cleanup supervisor_pilot  9984 5922
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:02,457 [wrapper] Test setup, not cleaning
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:02,587 [wrapper] apfmon messages muted
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:02,592 [wrapper] ==== wrapper stdout END ====
2025-02-24 03:56:04 (6432): Guest Log: 2025-02-24 08:56:02,602 [wrapper] ==== wrapper stderr END ====
2025-02-24 03:56:04 (6432): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 03:56:04 (6432): Guest Log:     "exeErrorCode": 0,
2025-02-24 03:56:04 (6432): Guest Log:     "exeErrorDiag": "",
2025-02-24 03:56:04 (6432): Guest Log:     "pilotErrorCode": 0,
2025-02-24 03:56:04 (6432): Guest Log:     "pilotErrorDiag": "",
2025-02-24 03:56:04 (6432): Guest Log:  *** Listing of results directory ***
2025-02-24 03:56:04 (6432): Guest Log: total 327064
2025-02-24 03:56:04 (6432): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 22 21:01 queuedata.json
2025-02-24 03:56:04 (6432): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 22 21:01 pilot3.tar.gz
2025-02-24 03:56:04 (6432): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 22 21:04 runpilot2-wrapper.sh
2025-02-24 03:56:04 (6432): Guest Log: -rwxr-xr-x. 1 atlas atlas     11033 Feb 23 22:19 init_data.xml
2025-02-24 03:56:04 (6432): Guest Log: -rwxr-xr-x. 1 atlas atlas    503553 Feb 23 22:19 input.tar.gz
2025-02-24 03:56:04 (6432): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 23 22:19 start_atlas.sh
2025-02-24 03:56:04 (6432): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 23 22:19 EVNT.43078917._002567.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 03:56:04 (6432): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Feb 23 22:20 pandaJob.out
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas       424 Feb 23 22:20 setup.sh.local
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas    987744 Feb 23 22:21 agis_schedconf.cvmfs.json
2025-02-24 03:56:04 (6432): Guest Log: drwx------. 4 atlas atlas      4096 Feb 23 22:21 pilot3
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas 324695623 Feb 24 08:54 HITS.43078919._088921.pool.root.1
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas      1041 Feb 24 08:55 memory_monitor_summary.json
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 24 08:55 agis_ddmendpoints.agis.ALL.json
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas    471726 Feb 24 08:55 log.43078919._088921.job.log.tgz.1
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 08:55 pilot_heartbeat.json
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas      7732 Feb 24 08:55 heartbeat.json
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 24 08:56 pilotlog.txt
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas   2765499 Feb 24 08:56 log.43078919._088921.job.log.1
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 08:56 output.list
2025-02-24 03:56:04 (6432): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 08:56 runtime_log
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas   3256320 Feb 24 08:56 result.tar.gz
2025-02-24 03:56:04 (6432): Guest Log: -rw-r--r--. 1 atlas atlas     10906 Feb 24 08:56 runtime_log.err
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas       650 Feb 24 08:56 fZvKDmYqB66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm0auKDmdasbNn.diag
2025-02-24 03:56:04 (6432): Guest Log: Looking for outputfile HITS.43078919._088921.pool.root.1
2025-02-24 03:56:04 (6432): Guest Log: HITS file was successfully produced
2025-02-24 03:56:04 (6432): Guest Log: -rw-------. 1 atlas atlas 324695623 Feb 24 08:54 /home/atlas/RunAtlas/HITS.43078919._088921.pool.root.1
2025-02-24 03:56:10 (6432): Guest Log: Successfully finished the ATLAS job!
2025-02-24 03:56:10 (6432): Guest Log: Copying the results back to the shared directory!
2025-02-24 03:56:10 (6432): Guest Log:  *** Contents of shared directory: ***
2025-02-24 03:56:10 (6432): Guest Log: total 656388
2025-02-24 03:56:10 (6432): Guest Log: -rwxrwxrwx. 1 root root 343650136 Feb 23 22:18 ATLAS.root_0
2025-02-24 03:56:10 (6432): Guest Log: -rwxrwxrwx. 1 root root 324695623 Feb 24 08:56 HITS.pool.root.1
2025-02-24 03:56:10 (6432): Guest Log: -rwxrwxrwx. 1 root root     11033 Feb 23 22:18 init_data.xml
2025-02-24 03:56:10 (6432): Guest Log: -rwxrwxrwx. 1 root root    503553 Feb 23 22:18 input.tar.gz
2025-02-24 03:56:10 (6432): Guest Log: -rwxrwxrwx. 1 root root   3256320 Feb 24 08:56 result.tar.gz
2025-02-24 03:56:10 (6432): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 22:18 start_atlas.sh
2025-02-24 03:56:10 (6432): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 03:56:10 (6432): VM Completion File Detected.
2025-02-24 03:56:10 (6432): Powering off VM.
2025-02-24 03:56:11 (6432): Successfully stopped VM.
2025-02-24 03:56:11 (6432): Deregistering VM. (boinc_eb345ec3373c47ae, slot#0)
2025-02-24 03:56:11 (6432): Removing network bandwidth throttle group from VM.
2025-02-24 03:56:11 (6432): Removing VM from VirtualBox.
03:56:16 (6432): called boinc_finish(0)

</stderr_txt>
]]>

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