Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-24 05:08:23 (320): Detected: vboxwrapper 26206
2025-02-24 05:08:23 (320): Detected: BOINC client v8.0.2
2025-02-24 05:08:24 (320): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-24 05:08:24 (320): Successfully copied 'init_data.xml' to the shared directory.
2025-02-24 05:08:25 (320): Create VM. (boinc_7f4f673ea7c1f97b, slot#3)
2025-02-24 05:08:27 (320): Setting Memory Size for VM. (4800MB)
2025-02-24 05:08:28 (320): Setting CPU Count for VM. (8)
2025-02-24 05:08:28 (320): Setting Chipset Options for VM.
2025-02-24 05:08:29 (320): Setting Graphics Controller Options for VM.
2025-02-24 05:08:29 (320): Setting Boot Options for VM.
2025-02-24 05:08:29 (320): Setting Network Configuration for NAT.
2025-02-24 05:08:29 (320): Enabling VM Network Access.
2025-02-24 05:08:30 (320): Disabling USB Support for VM.
2025-02-24 05:08:30 (320): Disabling COM Port Support for VM.
2025-02-24 05:08:30 (320): Disabling LPT Port Support for VM.
2025-02-24 05:08:30 (320): Disabling Audio Support for VM.
2025-02-24 05:08:31 (320): Disabling Clipboard Support for VM.
2025-02-24 05:08:31 (320): Disabling Drag and Drop Support for VM.
2025-02-24 05:08:31 (320): Adding storage controller(s) to VM.
2025-02-24 05:08:31 (320): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-24 05:08:34 (320): Adding VirtualBox Guest Additions to VM.
2025-02-24 05:08:35 (320): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-24 05:08:35 (320): forwarding host port 58297 to guest port 80
2025-02-24 05:08:35 (320): Enabling remote desktop for VM.
2025-02-24 05:08:35 (320): Required extension pack not installed, remote desktop not enabled.
2025-02-24 05:08:35 (320): Enabling shared directory for VM.
2025-02-24 05:08:36 (320): Starting VM using VBoxManage interface. (boinc_7f4f673ea7c1f97b, slot#3)
2025-02-24 05:08:41 (320): Successfully started VM. (PID = '9376')
2025-02-24 05:08:41 (320): Reporting VM Process ID to BOINC.
2025-02-24 05:08:41 (320): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-24 05:08:41 (320): Guest Log: CPUID EDX: 0x178bfbff
2025-02-24 05:08:41 (320): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-24 05:08:41 (320): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-24 05:08:41 (320): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-24 05:08:41 (320): Detected: Web Application Enabled (http://localhost:58297)
2025-02-24 05:08:41 (320): Preference change detected
2025-02-24 05:08:41 (320): Setting CPU throttle for VM. (100%)
2025-02-24 05:08:42 (320): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 05:08:43 (320): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-24 05:08:43 (320): Guest Log: BIOS: Booting from Hard Disk...
2025-02-24 05:08:45 (320): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-24 05:08:45 (320): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-24 05:08:45 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-24 05:08:45 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-24 05:08:45 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-24 05:08:45 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-24 05:08:46 (320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-24 05:08:53 (320): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-24 05:08:53 (320): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-24 05:08:58 (320): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-24 05:08:58 (320): Guest Log: 00:00:00.000074 main     Log opened 2025-02-24T05:08:55.419230000Z
2025-02-24 05:08:58 (320): Guest Log: 00:00:00.000133 main     OS Product: Linux
2025-02-24 05:08:58 (320): Guest Log: 00:00:00.000186 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-24 05:08:58 (320): Guest Log: 00:00:00.000214 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-24 05:08:58 (320): Guest Log: 00:00:00.000237 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-24 05:08:58 (320): Guest Log: 00:00:00.000237 main     Process ID: 1363
2025-02-24 05:08:58 (320): Guest Log: 00:00:00.000238 main     Package type: LINUX_64BITS_GENERIC
2025-02-24 05:08:58 (320): Guest Log: 00:00:00.000675 main     5.2.32 r132073 started. Verbose level = 0
2025-02-24 05:08:58 (320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-24 05:08:58 (320): Guest Log: [INFO] Mounting shared directory
2025-02-24 05:08:58 (320): Guest Log: [INFO] Checking for init_data.xml
2025-02-24 05:09:01 (320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-24 05:09:01 (320): Guest Log: [INFO] Detected branch: prod
2025-02-24 05:09:01 (320): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-24 05:09:01 (320): Guest Log: Copying input files
2025-02-24 05:09:02 (320): Guest Log: Copied input files into RunAtlas.
2025-02-24 05:09:02 (320): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-24 05:09:02 (320): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-24 05:09:02 (320): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-24 05:09:02 (320): Guest Log: Further information can be found at the LHC@home message board.
2025-02-24 05:09:08 (320): Guest Log: 00:00:10.006691 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 240 251 000ns (GuestNow=1 740 362 947 180 241 000 ns GuestLast=1 740 373 735 420 492 000 ns fSetTimeLastLoop=true )
2025-02-24 05:09:10 (320): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-24 05:09:10 (320): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-24 05:09:10 (320): Guest Log: 2.6.3.0 1641 0 30152 142994 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-24 05:09:11 (320): Guest Log: copied the webapp to /var/www
2025-02-24 05:09:11 (320): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-24 05:09:11 (320): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-24 05:09:11 (320): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-24 05:09:11 (320): Guest Log:  *** Starting ATLAS job. (PandaID=6524169535 taskID=43078919) ***
2025-02-24 05:21:08 (320): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 22:00:42 (320): Error in resume VM for VM: -2135228414
Command:
VBoxManage -q controlvm "boinc_7f4f673ea7c1f97b" resume
Output:
VBoxManage.exe: error: Cannot resume the machine as it is not paused (machine state: Running)
VBoxManage.exe: error: Details: code VBOX_E_INVALID_VM_STATE (0x80bb0002), component ConsoleWrap, interface IConsole, callee IUnknown
VBoxManage.exe: error: Context: "Resume()" at line 395 of file VBoxManageControlVM.cpp

2025-02-24 22:00:42 (320): Guest Log: 00:12:20.659431 timesync vgsvcTimeSyncWorker: Radical host time change: 59 970 251 000 000ns (HostNow=1 740 423 638 083 000 000 ns HostLast=1 740 363 667 832 000 000 ns)
2025-02-24 22:00:42 (320): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 22:00:48 (320): Guest Log: 00:12:30.660966 timesync vgsvcTimeSyncWorker: Radical guest time change: 59 970 252 235 000ns (GuestNow=1 740 423 648 084 657 000 ns GuestLast=1 740 363 677 832 422 000 ns fSetTimeLastLoop=true )
2025-02-24 22:05:00 (320): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 22:05:20 (320): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 22:10:10 (320): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 22:10:50 (320): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 22:15:00 (320): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 22:15:20 (320): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 22:15:50 (320): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 22:22:10 (320): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 22:22:40 (320): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 22:44:42 (320): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 22:45:46 (320): Guest Log:  *** Job finished ***
2025-02-24 22:45:46 (320): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:11:06,308 | INFO     | job 6524169535 has state 'failed' - writing heartbeat
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:11:06,309 | INFO     | payload/TRF did not report the number of read events
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:11:06,310 | INFO     | executing command: lscpu
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:11:06,326 | INFO     | found 8 cores (8 cores per socket, 1 sockets)
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:11:06,334 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup cpu_flags; cpu_arch.py
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:11:09,293 [wrapper] The pilot process (6014) is still running after 3m. Sending SIGKILL (9).
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:11:09,297 [wrapper] The pilot process (6014) is still running after 3m. Sending SIGKILL (9).
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:12:28,851 [wrapper] ==== pilot stdout END ====
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:12:28,855 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:12:28,858 [wrapper] pilotpid: 6014
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:12:28,861 [wrapper] Pilot exit status: 137
2025-02-24 22:45:46 (320): Guest Log: ./runpilot2-wrapper.sh: line 1015: /usr/bin/xargs: Input/output error
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:45:45,221 [wrapper] pandaids: 
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:45:45,224 [wrapper] Not found: wrapper_sigkill_, so not killed by wrapper
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:45:45,227 [wrapper] apfmon messages muted
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:45:45,280 [wrapper] No supervise_pilot CHILD process found
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:45:45,287 [wrapper] Test setup, not cleaning
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:45:45,297 [wrapper] apfmon messages muted
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:45:45,301 [wrapper] ==== wrapper stdout END ====
2025-02-24 22:45:46 (320): Guest Log: 2025-02-24 19:45:45,307 [wrapper] ==== wrapper stderr END ====
2025-02-24 22:45:46 (320): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 22:45:46 (320): Guest Log:  *** Listing of results directory ***
2025-02-24 22:45:46 (320): Guest Log: total 4048
2025-02-24 22:45:46 (320): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Feb 23 09:19 pilot3.tar.gz
2025-02-24 22:45:46 (320): Guest Log: -rwx------. 1 atlas atlas   35865 Feb 23 09:39 runpilot2-wrapper.sh
2025-02-24 22:45:46 (320): Guest Log: -rw-r--r--. 1 atlas atlas    5118 Feb 23 09:39 queuedata.json
2025-02-24 22:45:46 (320): Guest Log: -rwxr-xr-x. 1 atlas atlas    9044 Feb 24 02:09 init_data.xml
2025-02-24 22:45:46 (320): Guest Log: -rwxr-xr-x. 1 atlas atlas  503559 Feb 24 02:09 input.tar.gz
2025-02-24 22:45:46 (320): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Feb 24 02:09 start_atlas.sh
2025-02-24 22:45:46 (320): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb 24 02:09 EVNT.43078917._000350.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 22:45:46 (320): Guest Log: -rw-r--r--. 1 atlas atlas    2543 Feb 24 02:09 pandaJob.out
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas     424 Feb 24 02:09 setup.sh.local
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas  987744 Feb 24 02:10 agis_schedconf.cvmfs.json
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas 1582569 Feb 24 02:10 agis_ddmendpoints.agis.ALL.json
2025-02-24 22:45:46 (320): Guest Log: drwx------. 4 atlas atlas    4096 Feb 24 02:10 pilot3
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas      98 Feb 24 19:07 pilot_heartbeat.json
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas       0 Feb 24 19:08 wrapper_sigint_6014
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas    1021 Feb 24 19:08 memory_monitor_summary.json
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas    1131 Feb 24 19:08 heartbeat.json
2025-02-24 22:45:46 (320): Guest Log: drwxrwx---. 2 atlas atlas    4096 Feb 24 19:08 PanDA_Pilot-6524169535
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas   80986 Feb 24 19:08 log.43078919._090911.job.log.tgz.1
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas  106207 Feb 24 19:11 pilotlog.txt
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas       0 Feb 24 19:11 wrapper_sigkill_6014
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas  118808 Feb 24 19:45 log.43078919._090911.job.log.1
2025-02-24 22:45:46 (320): Guest Log: -rw-r--r--. 1 atlas atlas     571 Feb 24 19:45 runtime_log
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas  133120 Feb 24 19:45 result.tar.gz
2025-02-24 22:45:46 (320): Guest Log: -rw-r--r--. 1 atlas atlas   10305 Feb 24 19:45 runtime_log.err
2025-02-24 22:45:46 (320): Guest Log: -rw-------. 1 atlas atlas     656 Feb 24 19:45 kdNODmwdN66n9Rq4apOajLDm4fhM0noT9bVoFjIUDmYqeKDmOaLIJo.diag
2025-02-24 22:45:46 (320): Guest Log: Looking for outputfile HITS.43078919._090911.pool.root.1
2025-02-24 22:45:46 (320): Guest Log: No HITS file was produced
2025-02-24 22:45:46 (320): Guest Log: Successfully finished the ATLAS job!
2025-02-24 22:45:46 (320): Guest Log: Copying the results back to the shared directory!
2025-02-24 22:45:46 (320): Guest Log:  *** Contents of shared directory: ***
2025-02-24 22:45:46 (320): Guest Log: total 332456
2025-02-24 22:45:46 (320): Guest Log: -rwxrwxrwx. 1 root root 339761236 Feb 24 02:08 ATLAS.root_0
2025-02-24 22:45:46 (320): Guest Log: -rwxrwxrwx. 1 root root      9044 Feb 24 02:08 init_data.xml
2025-02-24 22:45:46 (320): Guest Log: -rwxrwxrwx. 1 root root    503559 Feb 23 21:47 input.tar.gz
2025-02-24 22:45:46 (320): Guest Log: -rwxrwxrwx. 1 root root    133120 Feb 24 19:45 result.tar.gz
2025-02-24 22:45:46 (320): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 21:47 start_atlas.sh
2025-02-24 22:45:46 (320): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 22:45:46 (320): VM Completion File Detected.
2025-02-24 22:45:46 (320): Powering off VM.
2025-02-24 22:45:47 (320): Successfully stopped VM.
2025-02-24 22:45:47 (320): Deregistering VM. (boinc_7f4f673ea7c1f97b, slot#3)
2025-02-24 22:45:47 (320): Removing network bandwidth throttle group from VM.
2025-02-24 22:45:47 (320): Removing VM from VirtualBox.
22:45:52 (320): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN