Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-24 01:57:32 (17260): Detected: vboxwrapper 26206
2025-02-24 01:57:32 (17260): Detected: BOINC client v8.0.2
2025-02-24 01:57:33 (17260): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-02-24 01:57:33 (17260): Successfully copied 'init_data.xml' to the shared directory.
2025-02-24 01:57:34 (17260): Create VM. (boinc_7aa4e3d8e1d1a044, slot#1)
2025-02-24 01:57:34 (17260): Setting Memory Size for VM. (4800MB)
2025-02-24 01:57:34 (17260): Setting CPU Count for VM. (8)
2025-02-24 01:57:35 (17260): Setting Chipset Options for VM.
2025-02-24 01:57:35 (17260): Setting Graphics Controller Options for VM.
2025-02-24 01:57:35 (17260): Setting Boot Options for VM.
2025-02-24 01:57:35 (17260): Setting Network Configuration for NAT.
2025-02-24 01:57:36 (17260): Enabling VM Network Access.
2025-02-24 01:57:36 (17260): Disabling USB Support for VM.
2025-02-24 01:57:36 (17260): Disabling COM Port Support for VM.
2025-02-24 01:57:36 (17260): Disabling LPT Port Support for VM.
2025-02-24 01:57:37 (17260): Disabling Audio Support for VM.
2025-02-24 01:57:37 (17260): Disabling Clipboard Support for VM.
2025-02-24 01:57:37 (17260): Disabling Drag and Drop Support for VM.
2025-02-24 01:57:37 (17260): Adding storage controller(s) to VM.
2025-02-24 01:57:38 (17260): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-24 01:57:38 (17260): Adding VirtualBox Guest Additions to VM.
2025-02-24 01:57:38 (17260): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-24 01:57:39 (17260): forwarding host port 59869 to guest port 80
2025-02-24 01:57:39 (17260): Enabling remote desktop for VM.
2025-02-24 01:57:39 (17260): Enabling shared directory for VM.
2025-02-24 01:57:40 (17260): Starting VM using VBoxManage interface. (boinc_7aa4e3d8e1d1a044, slot#1)
2025-02-24 01:57:45 (17260): Successfully started VM. (PID = '1988')
2025-02-24 01:57:45 (17260): Reporting VM Process ID to BOINC.
2025-02-24 01:57:45 (17260): Guest Log: BIOS: VirtualBox 7.0.22
2025-02-24 01:57:45 (17260): Guest Log: CPUID EDX: 0x178bfbff
2025-02-24 01:57:45 (17260): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-24 01:57:45 (17260): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-24 01:57:45 (17260): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-24 01:57:45 (17260): Detected: Web Application Enabled (http://localhost:59869)
2025-02-24 01:57:45 (17260): Detected: Remote Desktop Enabled (localhost:59870)
2025-02-24 01:57:45 (17260): Preference change detected
2025-02-24 01:57:45 (17260): Setting CPU throttle for VM. (90%)
2025-02-24 01:57:45 (17260): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 01:57:47 (17260): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-24 01:57:47 (17260): Guest Log: BIOS: Booting from Hard Disk...
2025-02-24 01:57:49 (17260): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-24 01:57:49 (17260): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-24 01:57:49 (17260): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-24 01:57:55 (17260): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-24 01:57:55 (17260): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-24 01:57:59 (17260): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-24 01:57:59 (17260): Guest Log: 00:00:00.000183 main     Log opened 2025-02-24T01:57:58.304910000Z
2025-02-24 01:57:59 (17260): Guest Log: 00:00:00.000325 main     OS Product: Linux
2025-02-24 01:57:59 (17260): Guest Log: 00:00:00.000365 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-24 01:57:59 (17260): Guest Log: 00:00:00.000389 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-24 01:57:59 (17260): Guest Log: 00:00:00.000410 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-24 01:57:59 (17260): Guest Log: 00:00:00.000410 main     Process ID: 1359
2025-02-24 01:57:59 (17260): Guest Log: 00:00:00.000411 main     Package type: LINUX_64BITS_GENERIC
2025-02-24 01:57:59 (17260): Guest Log: 00:00:00.001370 main     5.2.32 r132073 started. Verbose level = 0
2025-02-24 01:57:59 (17260): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-24 01:57:59 (17260): Guest Log: [INFO] Mounting shared directory
2025-02-24 01:57:59 (17260): Guest Log: [INFO] Checking for init_data.xml
2025-02-24 01:58:02 (17260): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-24 01:58:02 (17260): Guest Log: [INFO] Detected branch: prod
2025-02-24 01:58:02 (17260): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-24 01:58:02 (17260): Guest Log: Copying input files
2025-02-24 01:58:04 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 01:58:24 (17260): Guest Log: Copied input files into RunAtlas.
2025-02-24 01:58:24 (17260): Guest Log: Detected user-configured HTTP proxy at http://proxy.kippola.kiulu10clients.net:3128 - will set in /etc/cvmfs/default.local
2025-02-24 01:58:24 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 01:58:29 (17260): Guest Log: 00:00:10.004806 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 086 113 000ns (GuestNow=1 740 355 089 221 644 000 ns GuestLast=1 740 362 278 307 757 000 ns fSetTimeLastLoop=true )
2025-02-24 01:58:34 (17260): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-24 01:58:34 (17260): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-24 01:58:34 (17260): Guest Log: 2.6.3.0 1639 0 29596 142992 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2025-02-24 01:58:35 (17260): Guest Log: copied the webapp to /var/www
2025-02-24 01:58:35 (17260): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-24 01:58:35 (17260): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-24 01:58:35 (17260): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-24 01:58:35 (17260): Guest Log:  *** Starting ATLAS job. (PandaID=6522331438 taskID=43205094) ***
2025-02-24 01:59:04 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 01:59:24 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 01:59:34 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 01:59:54 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 02:01:34 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 02:01:54 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 02:04:15 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 02:04:36 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 02:11:58 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 02:12:18 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 02:48:05 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 02:48:26 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 02:53:07 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 02:53:27 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 02:53:47 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 02:54:07 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 03:02:59 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 03:03:19 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 03:04:09 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 03:04:29 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 03:37:59 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 03:38:19 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 03:42:02 (17260): Status Report: Elapsed Time: '6000.000000'
2025-02-24 03:42:02 (17260): Status Report: CPU Time: '17646.453125'
2025-02-24 03:54:02 (17260): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 03:54:23 (17260): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 04:02:39 (17260): Guest Log:  *** Job finished ***
2025-02-24 04:02:39 (17260): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:11,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:11,492 | INFO     | [data] copytool_out thread has finished
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:15,553 | INFO     | [data] queue_monitor thread has finished
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:16,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139827925739328)>', '<ExcThread(monitor, started 139827315975936)>']
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:16,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:16,610 | INFO     | [monitor] control thread has ended
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,559 | INFO     | all workflow threads have been joined
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,559 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,559 | INFO     | traces error code: 0
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,636 [wrapper] ==== pilot stdout END ====
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,640 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,643 [wrapper] pilotpid: 5996
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,647 [wrapper] Pilot exit status: 0
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,667 [wrapper] pandaids: 6522331438
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,692 [wrapper] cleanup supervisor_pilot  2241 5997
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,697 [wrapper] Test setup, not cleaning
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,706 [wrapper] apfmon messages muted
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,710 [wrapper] ==== wrapper stdout END ====
2025-02-24 04:02:39 (17260): Guest Log: 2025-02-24 01:58:21,714 [wrapper] ==== wrapper stderr END ====
2025-02-24 04:02:39 (17260): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 04:02:39 (17260): Guest Log:     "exeErrorCode": 0,
2025-02-24 04:02:39 (17260): Guest Log:     "exeErrorDiag": "",
2025-02-24 04:02:39 (17260): Guest Log:     "pilotErrorCode": 0,
2025-02-24 04:02:39 (17260): Guest Log:     "pilotErrorDiag": "",
2025-02-24 04:02:39 (17260): Guest Log:  *** Listing of results directory ***
2025-02-24 04:02:39 (17260): Guest Log: total 322888
2025-02-24 04:02:39 (17260): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 21 13:36 pilot3.tar.gz
2025-02-24 04:02:39 (17260): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 21 13:37 queuedata.json
2025-02-24 04:02:39 (17260): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 21 13:38 runpilot2-wrapper.sh
2025-02-24 04:02:39 (17260): Guest Log: -rwxr-xr-x. 1 atlas atlas      9262 Feb 23 23:58 init_data.xml
2025-02-24 04:02:39 (17260): Guest Log: -rwxr-xr-x. 1 atlas atlas    503558 Feb 23 23:58 input.tar.gz
2025-02-24 04:02:39 (17260): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 23 23:58 start_atlas.sh
2025-02-24 04:02:39 (17260): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 23 23:58 EVNT.43092757._001609.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 04:02:39 (17260): Guest Log: -rw-r--r--. 1 atlas atlas      2544 Feb 23 23:58 pandaJob.out
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas       479 Feb 23 23:58 setup.sh.local
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas    987744 Feb 23 23:58 agis_schedconf.cvmfs.json
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 23 23:58 agis_ddmendpoints.agis.ALL.json
2025-02-24 04:02:39 (17260): Guest Log: drwx------. 4 atlas atlas      4096 Feb 23 23:58 pilot3
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 01:57 pilot_heartbeat.json
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas 325235391 Feb 24 01:57 HITS.43205094._032271.pool.root.1
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas      1029 Feb 24 01:57 memory_monitor_summary.json
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas    299890 Feb 24 01:57 log.43205094._032271.job.log.tgz.1
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas      7730 Feb 24 01:58 heartbeat.json
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 24 01:58 pilotlog.txt
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas    531268 Feb 24 01:58 log.43205094._032271.job.log.1
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 01:58 output.list
2025-02-24 04:02:39 (17260): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 01:58 runtime_log
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas    849920 Feb 24 01:58 result.tar.gz
2025-02-24 04:02:39 (17260): Guest Log: -rw-r--r--. 1 atlas atlas     11409 Feb 24 01:58 runtime_log.err
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas       653 Feb 24 01:58 5o1MDmpPi56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmtRdKDmbayGfn.diag
2025-02-24 04:02:39 (17260): Guest Log: Looking for outputfile HITS.43205094._032271.pool.root.1
2025-02-24 04:02:39 (17260): Guest Log: HITS file was successfully produced
2025-02-24 04:02:39 (17260): Guest Log: -rw-------. 1 atlas atlas 325235391 Feb 24 01:57 /home/atlas/RunAtlas/HITS.43205094._032271.pool.root.1
2025-02-24 04:02:40 (17260): Guest Log: Successfully finished the ATLAS job!
2025-02-24 04:02:40 (17260): Guest Log: Copying the results back to the shared directory!
2025-02-24 04:02:40 (17260): Guest Log:  *** Contents of shared directory: ***
2025-02-24 04:02:40 (17260): Guest Log: total 655168
2025-02-24 04:02:40 (17260): Guest Log: -rwxrwxrwx. 1 root root 344262233 Feb 23 23:57 ATLAS.root_0
2025-02-24 04:02:40 (17260): Guest Log: -rwxrwxrwx. 1 root root 325235391 Feb 24  2025 HITS.pool.root.1
2025-02-24 04:02:40 (17260): Guest Log: -rwxrwxrwx. 1 root root      9262 Feb 23 23:57 init_data.xml
2025-02-24 04:02:40 (17260): Guest Log: -rwxrwxrwx. 1 root root    503558 Feb 23 21:55 input.tar.gz
2025-02-24 04:02:40 (17260): Guest Log: -rwxrwxrwx. 1 root root    849920 Feb 24  2025 result.tar.gz
2025-02-24 04:02:40 (17260): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 21:55 start_atlas.sh
2025-02-24 04:02:40 (17260): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 04:02:40 (17260): VM Completion File Detected.
2025-02-24 04:02:40 (17260): Powering off VM.
2025-02-24 04:02:41 (17260): Successfully stopped VM.
2025-02-24 04:02:41 (17260): Deregistering VM. (boinc_7aa4e3d8e1d1a044, slot#1)
2025-02-24 04:02:41 (17260): Removing network bandwidth throttle group from VM.
2025-02-24 04:02:41 (17260): Removing VM from VirtualBox.
04:02:46 (17260): called boinc_finish(0)

</stderr_txt>
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