Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
20:28:51 (18886): wrapper (7.7.26015): starting
20:28:51 (18886): wrapper: running run_atlas (--nthreads 12)
[2025-02-23 20:28:51] Arguments: --nthreads 12
[2025-02-23 20:28:51] Threads: 12
[2025-02-23 20:28:51] Checking for CVMFS
[2025-02-23 20:28:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-23 20:28:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-23 20:28:51] Running cvmfs_config stat atlas.cern.ch
[2025-02-23 20:28:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-23 20:28:51] 2.9.4.0 23140 96 53508 142995 3 56 2199015 4096001 0 130560 0 101331 99.998 2353 1073 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-02-23 20:28:51] CVMFS is ok
[2025-02-23 20:28:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 20:28:51] Checking for apptainer binary...
[2025-02-23 20:28:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-23 20:28:51] Running /usr/bin/apptainer --version
[2025-02-23 20:28:51] apptainer version 1.3.0-150600.2.2
[2025-02-23 20:28:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 20:28:51] boinc-runner
[2025-02-23 20:28:51] apptainer works
[2025-02-23 20:28:51] Set ATHENA_PROC_NUMBER=12
[2025-02-23 20:28:51] Set ATHENA_CORE_NUMBER=12
[2025-02-23 20:28:51] Starting ATLAS job with PandaID=6524162372
[2025-02-23 20:28:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 21:56:23]  *** The last 200 lines of the pilot log: ***
[2025-02-23 21:56:23]  guid=8f977939-9988-4a16-94ad-7fe9b7b75384
[2025-02-23 21:56:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-23 21:56:23]  is_altstaged=None
[2025-02-23 21:56:23]  is_tar=False
[2025-02-23 21:56:23]  lfn=log.43205075._059983.job.log.tgz.1
[2025-02-23 21:56:23]  mtime=0
[2025-02-23 21:56:23]  protocol_id=None
[2025-02-23 21:56:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-23 21:56:23]  replicas=None
[2025-02-23 21:56:23]  scope=mc23_13p6TeV
[2025-02-23 21:56:23]  status=None
[2025-02-23 21:56:23]  status_code=0
[2025-02-23 21:56:23]  storage_token=
[2025-02-23 21:56:23]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6524162372/log.43205075._059983.job.log.tgz.1
[2025-02-23 21:56:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/87/log.43205075._059983.job.log.tgz.1
[2025-02-23 21:56:23]  workdir=None
[2025-02-23 21:56:23] ]
[2025-02-23 21:56:23] 2025-02-24 03:55:53,113 | INFO     | transferring file log.43205075._059983.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6524162372/log.43205075._059983.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-02-23 21:56:23] 2025-02-24 03:55:53,113 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6524162372/log.43205075._059983.job.log.tgz.1 /var/lib/boinc/slots/0/log.43205075._059983.job
[2025-02-23 21:56:23] 2025-02-24 03:55:53,134 | INFO     | adding to output.list: log.43205075._059983.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/87/log.43205075._059983.job.log.tg
[2025-02-23 21:56:23] 2025-02-24 03:55:53,135 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-23 21:56:23] 2025-02-24 03:55:53,135 | INFO     | summary of transferred files:
[2025-02-23 21:56:23] 2025-02-24 03:55:53,135 | INFO     |  -- lfn=log.43205075._059983.job.log.tgz.1, status_code=0, status=transferred
[2025-02-23 21:56:23] 2025-02-24 03:55:53,135 | INFO     | stage-out finished correctly
[2025-02-23 21:56:23] 2025-02-24 03:55:53,435 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-23 21:56:23] 2025-02-24 03:55:55,423 | INFO     | job 6524162372 has state=finished
[2025-02-23 21:56:23] 2025-02-24 03:55:55,423 | INFO     | preparing for final server update for job 6524162372 in state='finished'
[2025-02-23 21:56:23] 2025-02-24 03:55:55,423 | INFO     | this job has now completed (state=finished)
[2025-02-23 21:56:23] 2025-02-24 03:55:55,423 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-23 21:56:23] 2025-02-24 03:55:55,424 | INFO     | log transfer has been attempted: DONE
[2025-02-23 21:56:23] 2025-02-24 03:55:55,424 | INFO     | job 6524162372 has finished - writing final server update
[2025-02-23 21:56:23] 2025-02-24 03:55:55,424 | INFO     | total number of processed events: 400 (read)
[2025-02-23 21:56:23] 2025-02-24 03:55:55,425 | INFO     | executing command: lscpu
[2025-02-23 21:56:23] 2025-02-24 03:55:55,446 | INFO     | found 16 cores (8 cores per socket, 2 sockets)
[2025-02-23 21:56:23] 2025-02-24 03:55:55,457 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-23 21:56:23] 2025-02-24 03:56:03,570 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-23 21:56:23] 2025-02-24 03:56:03,570 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6524162372/memory_monitor_summary.json (trf name=prmon)
[2025-02-23 21:56:23] 2025-02-24 03:56:03,575 | INFO     | extracted standard info from prmon json
[2025-02-23 21:56:23] 2025-02-24 03:56:03,575 | INFO     | extracted standard memory fields from prmon json
[2025-02-23 21:56:23] 2025-02-24 03:56:03,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-23 21:56:23] 2025-02-24 03:56:03,575 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-23 21:56:23] 2025-02-24 03:56:03,575 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-23 21:56:23] 2025-02-24 03:56:03,577 | INFO     | fitting pss+swap vs Time
[2025-02-23 21:56:23] 2025-02-24 03:56:03,578 | INFO     | model: linear, x: [1740364474.0, 1740364535.0, 1740364596.0, 1740364657.0, 1740364718.0, 1740364779.0, 1740364840.0, 1740364901.0, 1740364962.0, 1740365023.0, 1740
[2025-02-23 21:56:23] 2025-02-24 03:56:03,578 | INFO     | sum of square deviations: 147126479.5
[2025-02-23 21:56:23] 2025-02-24 03:56:03,578 | INFO     | sum of deviations: -1789893109.9999988
[2025-02-23 21:56:23] 2025-02-24 03:56:03,578 | INFO     | mean x: 1740366822.5
[2025-02-23 21:56:23] 2025-02-24 03:56:03,578 | INFO     | mean y: 2895386.512820513
[2025-02-23 21:56:23] 2025-02-24 03:56:03,578 | INFO     | -- intersect: 21175634617.762768
[2025-02-23 21:56:23] 2025-02-24 03:56:03,578 | INFO     | intersect: 21175634617.762768
[2025-02-23 21:56:23] 2025-02-24 03:56:03,578 | INFO     | chi2: 0.8985208473476224
[2025-02-23 21:56:23] 2025-02-24 03:56:03,578 | INFO     | -- intersect: 21175634617.762768
[2025-02-23 21:56:23] 2025-02-24 03:56:03,579 | INFO     | current memory leak: -12.17 B/s (using 78 data points, chi2=0.90)
[2025-02-23 21:56:23] 2025-02-24 03:56:03,579 | INFO     | ..............................
[2025-02-23 21:56:23] 2025-02-24 03:56:03,579 | INFO     | . Timing measurements:
[2025-02-23 21:56:23] 2025-02-24 03:56:03,579 | INFO     | . get job = 0 s
[2025-02-23 21:56:23] 2025-02-24 03:56:03,579 | INFO     | . initial setup = 3 s
[2025-02-23 21:56:23] 2025-02-24 03:56:03,579 | INFO     | . payload setup = 5 s
[2025-02-23 21:56:23] 2025-02-24 03:56:03,579 | INFO     | . stage-in = 0 s
[2025-02-23 21:56:23] 2025-02-24 03:56:03,579 | INFO     | . payload execution = 5185 s
[2025-02-23 21:56:23] 2025-02-24 03:56:03,579 | INFO     | . stage-out = 0 s
[2025-02-23 21:56:23] 2025-02-24 03:56:03,579 | INFO     | . log creation = 0 s
[2025-02-23 21:56:23] 2025-02-24 03:56:03,579 | INFO     | ..............................
[2025-02-23 21:56:23] 2025-02-24 03:56:03,621 | WARNING  | process 29176 can no longer be monitored (due to stat problems) - aborting
[2025-02-23 21:56:23] 2025-02-24 03:56:03,629 | INFO     | 
[2025-02-23 21:56:23] 2025-02-24 03:56:03,629 | INFO     | job summary report
[2025-02-23 21:56:23] 2025-02-24 03:56:03,629 | INFO     | --------------------------------------------------
[2025-02-23 21:56:23] 2025-02-24 03:56:03,629 | INFO     | PanDA job id: 6524162372
[2025-02-23 21:56:23] 2025-02-24 03:56:03,630 | INFO     | task id: 43205075
[2025-02-23 21:56:23] 2025-02-24 03:56:03,630 | INFO     | errors: (none)
[2025-02-23 21:56:23] 2025-02-24 03:56:03,630 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 21:56:23] 2025-02-24 03:56:03,630 | INFO     | pilot state: finished 
[2025-02-23 21:56:23] 2025-02-24 03:56:03,630 | INFO     | transexitcode: 0
[2025-02-23 21:56:23] 2025-02-24 03:56:03,630 | INFO     | exeerrorcode: 0
[2025-02-23 21:56:23] 2025-02-24 03:56:03,630 | INFO     | exeerrordiag: 
[2025-02-23 21:56:23] 2025-02-24 03:56:03,630 | INFO     | exitcode: 0
[2025-02-23 21:56:23] 2025-02-24 03:56:03,630 | INFO     | exitmsg: OK
[2025-02-23 21:56:23] 2025-02-24 03:56:03,630 | INFO     | cpuconsumptiontime: 50912 s
[2025-02-23 21:56:23] 2025-02-24 03:56:03,631 | INFO     | nevents: 400
[2025-02-23 21:56:23] 2025-02-24 03:56:03,631 | INFO     | neventsw: 0
[2025-02-23 21:56:23] 2025-02-24 03:56:03,631 | INFO     | pid: 29176
[2025-02-23 21:56:23] 2025-02-24 03:56:03,631 | INFO     | pgrp: 29176
[2025-02-23 21:56:23] 2025-02-24 03:56:03,631 | INFO     | corecount: 12
[2025-02-23 21:56:23] 2025-02-24 03:56:03,631 | INFO     | event service: False
[2025-02-23 21:56:23] 2025-02-24 03:56:03,631 | INFO     | sizes: {0: 2383091, 1: 2383346, 5: 2383552, 11: 2383608, 5194: 2409720, 5195: 2418845, 5205: 2418959}
[2025-02-23 21:56:23] 2025-02-24 03:56:03,631 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6524162372/memory_monitor_summary.json (trf name=prmon)
[2025-02-23 21:56:23] 2025-02-24 03:56:03,631 | INFO     | --------------------------------------------------
[2025-02-23 21:56:23] 2025-02-24 03:56:03,632 | INFO     | 
[2025-02-23 21:56:23] 2025-02-24 03:56:03,632 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-02-23 21:56:23] 2025-02-24 03:56:03,655 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,655 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,655 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,655 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,655 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,656 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 21:56:23] 2025-02-24 03:56:03,657 | INFO     | job 6524162372 has completed (purged errors)
[2025-02-23 21:56:23] 2025-02-24 03:56:03,657 | INFO     | overall cleanup function is called
[2025-02-23 21:56:23] 2025-02-24 03:56:03,680 | INFO     | number of running child processes to parent process 29176: 1
[2025-02-23 21:56:23] 2025-02-24 03:56:03,680 | INFO     | maximum number of monitored processes: 6
[2025-02-23 21:56:23] 2025-02-24 03:56:03,680 | INFO     | aborting job monitoring since job object (job id=6524162372) has expired
[2025-02-23 21:56:23] 2025-02-24 03:56:04,664 | INFO     | --- collectZombieJob: --- 10, [29176]
[2025-02-23 21:56:23] 2025-02-24 03:56:04,665 | INFO     | zombie collector waiting for pid 29176
[2025-02-23 21:56:23] 2025-02-24 03:56:04,665 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 21:56:23] 2025-02-24 03:56:04,665 | INFO     | collected zombie processes
[2025-02-23 21:56:23] 2025-02-24 03:56:04,665 | INFO     | will attempt to kill all subprocesses of pid=29176
[2025-02-23 21:56:23] 2025-02-24 03:56:04,708 | INFO     | process IDs to be killed: [29176] (in reverse order)
[2025-02-23 21:56:23] 2025-02-24 03:56:04,749 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 21:56:23] 2025-02-24 03:56:04,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 21:56:23] 2025-02-24 03:56:04,751 | INFO     | did not find any defunct processes belonging to 29176
[2025-02-23 21:56:23] 2025-02-24 03:56:04,752 | INFO     | did not find any defunct processes belonging to 29176
[2025-02-23 21:56:23] 2025-02-24 03:56:04,753 | INFO     | ready for new job
[2025-02-23 21:56:23] 2025-02-24 03:56:04,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 21:56:23] 2025-02-24 03:56:04,754 | INFO     | **************************************
[2025-02-23 21:56:23] 2025-02-24 03:56:04,755 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 21:56:23] 2025-02-24 03:56:04,755 | INFO     | **************************************
[2025-02-23 21:56:23] 2025-02-24 03:56:04,755 | INFO     | 
[2025-02-23 21:56:23] 2025-02-24 03:56:04,755 | INFO     | architecture information:
[2025-02-23 21:56:23] 2025-02-24 03:56:04,755 | INFO     | executing command: cat /etc/os-release
[2025-02-23 21:56:23] 2025-02-24 03:56:04,768 | INFO     | cat /etc/os-release:
[2025-02-23 21:56:23] NAME="CentOS Linux"
[2025-02-23 21:56:23] VERSION="7 (Core)"
[2025-02-23 21:56:23] ID="centos"
[2025-02-23 21:56:23] ID_LIKE="rhel fedora"
[2025-02-23 21:56:23] VERSION_ID="7"
[2025-02-23 21:56:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 21:56:23] ANSI_COLOR="0;31"
[2025-02-23 21:56:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 21:56:23] HOME_URL="https://www.centos.org/"
[2025-02-23 21:56:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 21:56:23] 
[2025-02-23 21:56:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 21:56:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 21:56:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 21:56:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 21:56:23] 
[2025-02-23 21:56:23] 2025-02-24 03:56:04,768 | INFO     | **************************************
[2025-02-23 21:56:23] 2025-02-24 03:56:05,271 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-02-23 21:56:23] 2025-02-24 03:56:05,285 | INFO     | sufficient remaining disk space (177317347328 B)
[2025-02-23 21:56:23] 2025-02-24 03:56:05,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 21:56:23] 2025-02-24 03:56:05,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 21:56:23] 2025-02-24 03:56:05,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 21:56:23] 2025-02-24 03:56:05,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 21:56:23] 2025-02-24 03:56:05,286 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-23 21:56:23] 2025-02-24 03:56:05,286 | INFO     | aborting loop
[2025-02-23 21:56:23] 2025-02-24 03:56:05,286 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 21:56:23] 2025-02-24 03:56:05,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 21:56:23] 2025-02-24 03:56:05,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 21:56:23] 2025-02-24 03:56:06,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 21:56:23] 2025-02-24 03:56:06,290 | INFO     | [job] retrieve thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:06,290 | INFO     | [job] queue monitor thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:06,291 | INFO     | [job] job monitor thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:06,325 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:06,348 | INFO     | all job control threads have been joined
[2025-02-23 21:56:23] 2025-02-24 03:56:06,357 | INFO     | all data control threads have been joined
[2025-02-23 21:56:23] 2025-02-24 03:56:06,380 | INFO     | [payload] validate_post thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:06,487 | INFO     | [data] copytool_in thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:06,624 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:06,757 | INFO     | all payload control threads have been joined
[2025-02-23 21:56:23] 2025-02-24 03:56:07,030 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:07,088 | INFO     | [payload] failed_post thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:07,353 | INFO     | [job] control thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:07,362 | INFO     | [data] control thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:07,734 | INFO     | [job] validate thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:07,762 | INFO     | [payload] control thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:08,201 | INFO     | [data] copytool_out thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:08,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 21:56:23] 2025-02-24 03:56:12,493 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:15,820 | INFO     | job.realtimelogging is not enabled
[2025-02-23 21:56:23] 2025-02-24 03:56:16,821 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 21:56:23] 2025-02-24 03:56:18,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140661068453696)>', '<ExcThread(monitor, started 140660413806336)>']
[2025-02-23 21:56:23] 2025-02-24 03:56:18,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 21:56:23] 2025-02-24 03:56:18,323 | INFO     | [monitor] control thread has ended
[2025-02-23 21:56:23] 2025-02-24 03:56:23,197 | INFO     | all workflow threads have been joined
[2025-02-23 21:56:23] 2025-02-24 03:56:23,197 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 21:56:23] 2025-02-24 03:56:23,197 | INFO     | traces error code: 0
[2025-02-23 21:56:23] 2025-02-24 03:56:23,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 21:56:23] 2025-02-24 03:56:23,272 [wrapper] ==== pilot stdout END ====
[2025-02-23 21:56:23] 2025-02-24 03:56:23,276 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 21:56:23] 2025-02-24 03:56:23,280 [wrapper] pilotpid: 22585
[2025-02-23 21:56:23] 2025-02-24 03:56:23,284 [wrapper] Pilot exit status: 0
[2025-02-23 21:56:23] 2025-02-24 03:56:23,298 [wrapper] pandaids: 6524162372
[2025-02-23 21:56:23] 2025-02-24 03:56:23,324 [wrapper] cleanup supervisor_pilot  9359 22586
[2025-02-23 21:56:23] 2025-02-24 03:56:23,328 [wrapper] Test setup, not cleaning
[2025-02-23 21:56:23] 2025-02-24 03:56:23,337 [wrapper] apfmon messages muted
[2025-02-23 21:56:23] 2025-02-24 03:56:23,340 [wrapper] ==== wrapper stdout END ====
[2025-02-23 21:56:23] 2025-02-24 03:56:23,345 [wrapper] ==== wrapper stderr END ====
[2025-02-23 21:56:23]  *** Error codes and diagnostics ***
[2025-02-23 21:56:23]     "exeErrorCode": 0,
[2025-02-23 21:56:23]     "exeErrorDiag": "",
[2025-02-23 21:56:23]     "pilotErrorCode": 0,
[2025-02-23 21:56:23]     "pilotErrorDiag": "",
[2025-02-23 21:56:23]  *** Listing of results directory ***
[2025-02-23 21:56:23] total 646984
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc    491065 Feb 23 03:19 pilot3.tar.gz
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc      5118 Feb 23 03:34 queuedata.json
[2025-02-23 21:56:23] -rwx------ 1 boinc boinc     35865 Feb 23 03:35 runpilot2-wrapper.sh
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc       100 Feb 23 20:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 21:56:23] -rwxr-xr-x 1 boinc boinc      7986 Feb 23 20:28 run_atlas
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc       105 Feb 23 20:28 job.xml
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc      9423 Feb 23 20:28 init_data.xml
[2025-02-23 21:56:23] -rw-r--r-- 2 boinc boinc 342156620 Feb 23 20:28 EVNT.43092757._001088.pool.root.1
[2025-02-23 21:56:23] -rw-r--r-- 2 boinc boinc     17569 Feb 23 20:28 start_atlas.sh
[2025-02-23 21:56:23] drwxrwx--x 1 boinc boinc        76 Feb 23 20:28 shared
[2025-02-23 21:56:23] -rw-r--r-- 2 boinc boinc    503552 Feb 23 20:28 input.tar.gz
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc         0 Feb 23 20:28 boinc_lockfile
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc      2555 Feb 23 20:28 pandaJob.out
[2025-02-23 21:56:23] -rw------- 1 boinc boinc       473 Feb 23 20:28 setup.sh.local
[2025-02-23 21:56:23] -rw------- 1 boinc boinc    987720 Feb 23 20:28 agis_schedconf.cvmfs.json
[2025-02-23 21:56:23] -rw------- 1 boinc boinc   1582569 Feb 23 20:29 agis_ddmendpoints.agis.ALL.json
[2025-02-23 21:56:23] drwx------ 1 boinc boinc       368 Feb 23 20:29 pilot3
[2025-02-23 21:56:23] -rw------- 1 boinc boinc 314841270 Feb 23 21:55 HITS.43205075._059983.pool.root.1
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc       529 Feb 23 21:55 boinc_task_state.xml
[2025-02-23 21:56:23] -rw------- 1 boinc boinc        95 Feb 23 21:55 pilot_heartbeat.json
[2025-02-23 21:56:23] -rw------- 1 boinc boinc      1017 Feb 23 21:55 memory_monitor_summary.json
[2025-02-23 21:56:23] -rw------- 1 boinc boinc    365321 Feb 23 21:55 log.43205075._059983.job.log.tgz.1
[2025-02-23 21:56:23] -rw------- 1 boinc boinc      7699 Feb 23 21:56 heartbeat.json
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc      8192 Feb 23 21:56 boinc_mmap_file
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc        27 Feb 23 21:56 wrapper_checkpoint.txt
[2025-02-23 21:56:23] -rw------- 1 boinc boinc      4411 Feb 23 21:56 pilotlog.txt
[2025-02-23 21:56:23] -rw------- 1 boinc boinc    491801 Feb 23 21:56 log.43205075._059983.job.log.1
[2025-02-23 21:56:23] -rw------- 1 boinc boinc       357 Feb 23 21:56 output.list
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc       620 Feb 23 21:56 runtime_log
[2025-02-23 21:56:23] -rw------- 1 boinc boinc    880640 Feb 23 21:56 result.tar.gz
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc     11478 Feb 23 21:56 runtime_log.err
[2025-02-23 21:56:23] -rw------- 1 boinc boinc       657 Feb 23 21:56 QImLDmmZN66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmbKvKDm1gmkhm.diag
[2025-02-23 21:56:23] -rw-r--r-- 1 boinc boinc     21109 Feb 23 21:56 stderr.txt
[2025-02-23 21:56:23] HITS file was successfully produced:
[2025-02-23 21:56:23] -rw------- 1 boinc boinc 314841270 Feb 23 21:55 shared/HITS.pool.root.1
[2025-02-23 21:56:23]  *** Contents of shared directory: ***
[2025-02-23 21:56:23] total 642976
[2025-02-23 21:56:23] -rw-r--r-- 2 boinc boinc 342156620 Feb 23 20:28 ATLAS.root_0
[2025-02-23 21:56:23] -rw-r--r-- 2 boinc boinc     17569 Feb 23 20:28 start_atlas.sh
[2025-02-23 21:56:23] -rw-r--r-- 2 boinc boinc    503552 Feb 23 20:28 input.tar.gz
[2025-02-23 21:56:23] -rw------- 1 boinc boinc 314841270 Feb 23 21:55 HITS.pool.root.1
[2025-02-23 21:56:23] -rw------- 1 boinc boinc    880640 Feb 23 21:56 result.tar.gz
21:56:24 (18886): run_atlas exited; CPU time 50880.616711
21:56:24 (18886): called boinc_finish(0)

</stderr_txt>
]]>

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