Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 21:53:16 (12028): Detected: vboxwrapper 26206
2025-02-23 21:53:16 (12028): Detected: BOINC client v8.0.4
2025-02-23 21:53:17 (12028): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-23 21:53:17 (12028): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 21:53:18 (12028): Create VM. (boinc_7ea757d5c8b259e7, slot#1)
2025-02-23 21:53:19 (12028): Setting Memory Size for VM. (4400MB)
2025-02-23 21:53:19 (12028): Setting CPU Count for VM. (4)
2025-02-23 21:53:19 (12028): Setting Chipset Options for VM.
2025-02-23 21:53:19 (12028): Setting Graphics Controller Options for VM.
2025-02-23 21:53:20 (12028): Setting Boot Options for VM.
2025-02-23 21:53:20 (12028): Setting Network Configuration for NAT.
2025-02-23 21:53:20 (12028): Enabling VM Network Access.
2025-02-23 21:53:21 (12028): Disabling USB Support for VM.
2025-02-23 21:53:21 (12028): Disabling COM Port Support for VM.
2025-02-23 21:53:21 (12028): Disabling LPT Port Support for VM.
2025-02-23 21:53:22 (12028): Disabling Audio Support for VM.
2025-02-23 21:53:22 (12028): Disabling Clipboard Support for VM.
2025-02-23 21:53:22 (12028): Disabling Drag and Drop Support for VM.
2025-02-23 21:53:23 (12028): Adding storage controller(s) to VM.
2025-02-23 21:53:23 (12028): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 21:53:27 (12028): Adding VirtualBox Guest Additions to VM.
2025-02-23 21:53:27 (12028): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 21:53:28 (12028): forwarding host port 55469 to guest port 80
2025-02-23 21:53:28 (12028): Enabling remote desktop for VM.
2025-02-23 21:53:29 (12028): Required extension pack not installed, remote desktop not enabled.
2025-02-23 21:53:29 (12028): Enabling shared directory for VM.
2025-02-23 21:53:29 (12028): Starting VM using VBoxManage interface. (boinc_7ea757d5c8b259e7, slot#1)
2025-02-23 21:53:38 (12028): Successfully started VM. (PID = '9592')
2025-02-23 21:53:38 (12028): Reporting VM Process ID to BOINC.
2025-02-23 21:53:38 (12028): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-23 21:53:38 (12028): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 21:53:38 (12028): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 21:53:38 (12028): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 21:53:38 (12028): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 21:53:38 (12028): Detected: Web Application Enabled (http://localhost:55469)
2025-02-23 21:53:38 (12028): Preference change detected
2025-02-23 21:53:38 (12028): Setting CPU throttle for VM. (100%)
2025-02-23 21:53:38 (12028): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 21:53:41 (12028): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 21:53:41 (12028): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 21:53:43 (12028): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 21:53:43 (12028): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 21:53:43 (12028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 21:53:52 (12028): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 21:53:52 (12028): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 21:53:59 (12028): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 21:53:59 (12028): Guest Log: 00:00:00.000196 main     Log opened 2025-02-23T21:53:57.364904000Z
2025-02-23 21:53:59 (12028): Guest Log: 00:00:00.000361 main     OS Product: Linux
2025-02-23 21:53:59 (12028): Guest Log: 00:00:00.000412 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 21:53:59 (12028): Guest Log: 00:00:00.000449 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 21:53:59 (12028): Guest Log: 00:00:00.000487 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 21:53:59 (12028): Guest Log: 00:00:00.000488 main     Process ID: 1267
2025-02-23 21:53:59 (12028): Guest Log: 00:00:00.000489 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 21:53:59 (12028): Guest Log: 00:00:00.001614 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 21:53:59 (12028): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 21:53:59 (12028): Guest Log: [INFO] Mounting shared directory
2025-02-23 21:53:59 (12028): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 21:54:01 (12028): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 21:54:01 (12028): Guest Log: [INFO] Detected branch: prod
2025-02-23 21:54:01 (12028): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 21:54:01 (12028): Guest Log: Copying input files
2025-02-23 21:54:04 (12028): Guest Log: Copied input files into RunAtlas.
2025-02-23 21:54:04 (12028): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 21:54:04 (12028): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 21:54:04 (12028): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 21:54:04 (12028): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 21:54:09 (12028): Guest Log: 00:00:10.005623 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 780 246 000ns (GuestNow=1 740 344 048 589 008 000 ns GuestLast=1 740 347 637 369 254 000 ns fSetTimeLastLoop=true )
2025-02-23 21:54:12 (12028): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 21:54:12 (12028): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 21:54:12 (12028): Guest Log: 2.6.3.0 1542 0 30060 142987 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 21:54:14 (12028): Guest Log: copied the webapp to /var/www
2025-02-23 21:54:14 (12028): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-23 21:54:14 (12028): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-23 21:54:14 (12028): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 21:54:14 (12028): Guest Log:  *** Starting ATLAS job. (PandaID=6524132077 taskID=43205094) ***
2025-02-23 22:01:55 (12028): Guest Log:  *** Job finished ***
2025-02-23 22:01:55 (12028): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:44,947 | INFO     | [data] copytool_out thread has finished
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:45,146 | INFO     | [job] control thread has finished
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:46,429 | INFO     | [data] queue_monitor thread has finished
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:47,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140245924075328)>', '<ExcThread(monitor, started 140244909291264)>']
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:47,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:47,698 | INFO     | [monitor] control thread has ended
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,515 | INFO     | all workflow threads have been joined
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,515 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,515 | INFO     | traces error code: 0
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,665 [wrapper] ==== pilot stdout END ====
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,673 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,681 [wrapper] pilotpid: 5869
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,689 [wrapper] Pilot exit status: 0
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,777 [wrapper] pandaids: 6524132077
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,826 [wrapper] cleanup supervisor_pilot  5875 5870
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,834 [wrapper] Test setup, not cleaning
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,850 [wrapper] apfmon messages muted
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,858 [wrapper] ==== wrapper stdout END ====
2025-02-23 22:01:55 (12028): Guest Log: 2025-02-23 21:01:52,866 [wrapper] ==== wrapper stderr END ====
2025-02-23 22:01:55 (12028): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 22:01:55 (12028): Guest Log:     "exeErrorCode": 65,
2025-02-23 22:01:55 (12028): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-02-23 22:01:55 (12028): Guest Log:     "pilotErrorCode": 1305,
2025-02-23 22:01:55 (12028): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 20:58:22,672 CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-02-23 22:01:55 (12028): Guest Log:  *** Listing of results directory ***
2025-02-23 22:01:55 (12028): Guest Log: total 3988
2025-02-23 22:01:55 (12028): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Feb 23 08:47 pilot3.tar.gz
2025-02-23 22:01:55 (12028): Guest Log: -rw-r--r--. 1 atlas atlas    5118 Feb 23 09:14 queuedata.json
2025-02-23 22:01:55 (12028): Guest Log: -rwx------. 1 atlas atlas   35865 Feb 23 09:15 runpilot2-wrapper.sh
2025-02-23 22:01:55 (12028): Guest Log: -rwxr-xr-x. 1 atlas atlas    8703 Feb 23 20:54 init_data.xml
2025-02-23 22:01:55 (12028): Guest Log: -rwxr-xr-x. 1 atlas atlas  503560 Feb 23 20:54 input.tar.gz
2025-02-23 22:01:55 (12028): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Feb 23 20:54 start_atlas.sh
2025-02-23 22:01:55 (12028): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb 23 20:54 EVNT.43092757._002008.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 22:01:55 (12028): Guest Log: -rw-r--r--. 1 atlas atlas    2547 Feb 23 20:54 pandaJob.out
2025-02-23 22:01:55 (12028): Guest Log: -rw-------. 1 atlas atlas     424 Feb 23 20:54 setup.sh.local
2025-02-23 22:01:55 (12028): Guest Log: -rw-------. 1 atlas atlas  987736 Feb 23 20:54 agis_schedconf.cvmfs.json
2025-02-23 22:01:55 (12028): Guest Log: -rw-------. 1 atlas atlas 1582569 Feb 23 20:54 agis_ddmendpoints.agis.ALL.json
2025-02-23 22:01:55 (12028): Guest Log: drwx------. 4 atlas atlas    4096 Feb 23 20:54 pilot3
2025-02-23 22:01:55 (12028): Guest Log: -rw-------. 1 atlas atlas   46292 Feb 23 20:59 log.43205094._038895.job.log.tgz.1
2025-02-23 22:01:55 (12028): Guest Log: -rw-------. 1 atlas atlas      95 Feb 23 21:00 pilot_heartbeat.json
2025-02-23 22:01:55 (12028): Guest Log: -rw-------. 1 atlas atlas    8035 Feb 23 21:01 heartbeat.json
2025-02-23 22:01:55 (12028): Guest Log: -rw-------. 1 atlas atlas    4275 Feb 23 21:01 pilotlog.txt
2025-02-23 22:01:55 (12028): Guest Log: -rw-------. 1 atlas atlas  128530 Feb 23 21:01 log.43205094._038895.job.log.1
2025-02-23 22:01:55 (12028): Guest Log: -rw-------. 1 atlas atlas     188 Feb 23 21:01 output.list
2025-02-23 22:01:55 (12028): Guest Log: -rw-r--r--. 1 atlas atlas     620 Feb 23 21:01 runtime_log
2025-02-23 22:01:55 (12028): Guest Log: -rw-------. 1 atlas atlas  194560 Feb 23 21:01 result.tar.gz
2025-02-23 22:01:55 (12028): Guest Log: -rw-r--r--. 1 atlas atlas   10794 Feb 23 21:01 runtime_log.err
2025-02-23 22:01:55 (12028): Guest Log: -rw-------. 1 atlas atlas     645 Feb 23 21:01 gTFLDmjGN66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmYJvKDmJIhjmn.diag
2025-02-23 22:01:55 (12028): Guest Log: Looking for outputfile HITS.43205094._038895.pool.root.1
2025-02-23 22:01:55 (12028): Guest Log: No HITS file was produced
2025-02-23 22:01:55 (12028): Guest Log: Successfully finished the ATLAS job!
2025-02-23 22:01:55 (12028): Guest Log: Copying the results back to the shared directory!
2025-02-23 22:01:55 (12028): Guest Log:  *** Contents of shared directory: ***
2025-02-23 22:01:55 (12028): Guest Log: total 335280
2025-02-23 22:01:55 (12028): Guest Log: -rwxrwxrwx. 1 root root 342591822 Feb 23 20:53 ATLAS.root_0
2025-02-23 22:01:55 (12028): Guest Log: -rwxrwxrwx. 1 root root      8703 Feb 23 20:53 init_data.xml
2025-02-23 22:01:55 (12028): Guest Log: -rwxrwxrwx. 1 root root    503560 Feb 23 20:52 input.tar.gz
2025-02-23 22:01:55 (12028): Guest Log: -rwxrwxrwx. 1 root root    194560 Feb 23 21:01 result.tar.gz
2025-02-23 22:01:55 (12028): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 20:52 start_atlas.sh
2025-02-23 22:01:55 (12028): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 22:01:55 (12028): VM Completion File Detected.
2025-02-23 22:01:55 (12028): Powering off VM.
2025-02-23 22:01:59 (12028): Successfully stopped VM.
2025-02-23 22:01:59 (12028): Deregistering VM. (boinc_7ea757d5c8b259e7, slot#1)
2025-02-23 22:01:59 (12028): Removing network bandwidth throttle group from VM.
2025-02-23 22:02:00 (12028): Removing VM from VirtualBox.
22:02:05 (12028): called boinc_finish(0)

</stderr_txt>
]]>

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