Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-24 04:27:58 (6872): Detected: vboxwrapper 26206
2025-02-24 04:27:58 (6872): Detected: BOINC client v7.22.2
2025-02-24 04:27:59 (6872): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2025-02-24 04:28:00 (6872): Successfully copied 'init_data.xml' to the shared directory.
2025-02-24 04:28:00 (6872): Create VM. (boinc_5f55842d5f65c614, slot#0)
2025-02-24 04:28:01 (6872): Setting Memory Size for VM. (4200MB)
2025-02-24 04:28:01 (6872): Setting CPU Count for VM. (2)
2025-02-24 04:28:01 (6872): Setting Chipset Options for VM.
2025-02-24 04:28:02 (6872): Setting Graphics Controller Options for VM.
2025-02-24 04:28:02 (6872): Setting Boot Options for VM.
2025-02-24 04:28:02 (6872): Setting Network Configuration for NAT.
2025-02-24 04:28:02 (6872): Enabling VM Network Access.
2025-02-24 04:28:03 (6872): Disabling USB Support for VM.
2025-02-24 04:28:03 (6872): Disabling COM Port Support for VM.
2025-02-24 04:28:03 (6872): Disabling LPT Port Support for VM.
2025-02-24 04:28:04 (6872): Disabling Audio Support for VM.
2025-02-24 04:28:04 (6872): Disabling Clipboard Support for VM.
2025-02-24 04:28:04 (6872): Disabling Drag and Drop Support for VM.
2025-02-24 04:28:05 (6872): Adding storage controller(s) to VM.
2025-02-24 04:28:05 (6872): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-24 04:28:06 (6872): Adding VirtualBox Guest Additions to VM.
2025-02-24 04:28:06 (6872): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-24 04:28:07 (6872): forwarding host port 2595 to guest port 80
2025-02-24 04:28:07 (6872): Enabling remote desktop for VM.
2025-02-24 04:28:07 (6872): Required extension pack not installed, remote desktop not enabled.
2025-02-24 04:28:07 (6872): Enabling shared directory for VM.
2025-02-24 04:28:08 (6872): Starting VM using VBoxManage interface. (boinc_5f55842d5f65c614, slot#0)
2025-02-24 04:28:14 (6872): Successfully started VM. (PID = '5496')
2025-02-24 04:28:14 (6872): Reporting VM Process ID to BOINC.
2025-02-24 04:28:14 (6872): Guest Log: BIOS: VirtualBox 6.1.34
2025-02-24 04:28:14 (6872): Guest Log: CPUID EDX: 0x178bfbff
2025-02-24 04:28:14 (6872): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-24 04:28:14 (6872): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-24 04:28:14 (6872): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-24 04:28:14 (6872): Detected: Web Application Enabled (http://localhost:2595)
2025-02-24 04:28:14 (6872): Preference change detected
2025-02-24 04:28:14 (6872): Setting CPU throttle for VM. (50%)
2025-02-24 04:28:14 (6872): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 30 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 04:28:16 (6872): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-24 04:28:16 (6872): Guest Log: BIOS: Booting from Hard Disk...
2025-02-24 04:28:21 (6872): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-24 04:28:21 (6872): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-24 04:28:21 (6872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-24 04:28:34 (6872): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-24 04:28:34 (6872): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-24 04:28:58 (6872): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-24 04:28:58 (6872): Guest Log: 00:00:00.000272 main     Log opened 2025-02-24T04:28:57.103084000Z
2025-02-24 04:28:58 (6872): Guest Log: 00:00:00.000556 main     OS Product: Linux
2025-02-24 04:28:58 (6872): Guest Log: 00:00:00.000643 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-24 04:28:58 (6872): Guest Log: 00:00:00.000720 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-24 04:28:58 (6872): Guest Log: 00:00:00.000797 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-24 04:28:58 (6872): Guest Log: 00:00:00.000799 main     Process ID: 1259
2025-02-24 04:28:58 (6872): Guest Log: 00:00:00.000800 main     Package type: LINUX_64BITS_GENERIC
2025-02-24 04:28:58 (6872): Guest Log: 00:00:00.002287 main     5.2.32 r132073 started. Verbose level = 0
2025-02-24 04:28:58 (6872): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-24 04:28:58 (6872): Guest Log: [INFO] Mounting shared directory
2025-02-24 04:28:59 (6872): Guest Log: [INFO] Checking for init_data.xml
2025-02-24 04:29:08 (6872): Guest Log: 00:00:10.043587 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 789 054 947 000ns (GuestNow=1 740 342 548 052 708 000 ns GuestLast=1 740 371 337 107 655 000 ns fSetTimeLastLoop=true )
2025-02-24 04:29:11 (6872): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-24 04:29:11 (6872): Guest Log: [INFO] Detected branch: prod
2025-02-24 04:29:12 (6872): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-24 04:29:12 (6872): Guest Log: Copying input files
2025-02-24 04:29:17 (6872): Guest Log: Copied input files into RunAtlas.
2025-02-24 04:29:17 (6872): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-24 04:29:17 (6872): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-24 04:29:17 (6872): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-24 04:29:17 (6872): Guest Log: Further information can be found at the LHC@home message board.
2025-02-24 04:29:29 (6872): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-24 04:29:30 (6872): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-24 04:29:30 (6872): Guest Log: 2.6.3.0 1556 0 32092 142987 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-24 04:29:35 (6872): Guest Log: copied the webapp to /var/www
2025-02-24 04:29:35 (6872): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-24 04:29:35 (6872): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-24 04:29:36 (6872): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-24 04:29:37 (6872): Guest Log:  *** Starting ATLAS job. (PandaID=6522147502 taskID=43205075) ***
2025-02-24 04:32:49 (6872): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 04:33:09 (6872): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 04:38:49 (6872): Guest Log:  *** Job finished ***
2025-02-24 04:38:49 (6872): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:14,737 | INFO     | [data] copytool_out thread has finished
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:15,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:19,021 | INFO     | [data] queue_monitor thread has finished
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:20,694 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639140108096)>', '<ExcThread(monitor, started 139638555526912)>']
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:21,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:21,075 | INFO     | [monitor] control thread has ended
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:25,844 | INFO     | all workflow threads have been joined
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:25,845 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:25,845 | INFO     | traces error code: 0
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:25,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:26,077 [wrapper] ==== pilot stdout END ====
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:26,084 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:26,091 [wrapper] pilotpid: 5872
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:26,098 [wrapper] Pilot exit status: 0
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:26,575 [wrapper] pandaids: 6522147502
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:26,617 [wrapper] cleanup supervisor_pilot  5878 5873
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:26,653 [wrapper] Test setup, not cleaning
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:26,670 [wrapper] apfmon messages muted
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:26,676 [wrapper] ==== wrapper stdout END ====
2025-02-24 04:38:49 (6872): Guest Log: 2025-02-23 20:38:26,683 [wrapper] ==== wrapper stderr END ====
2025-02-24 04:38:49 (6872): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 04:38:49 (6872): Guest Log:     "exeErrorCode": 65,
2025-02-24 04:38:49 (6872): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-02-24 04:38:49 (6872): Guest Log:     "pilotErrorCode": 1305,
2025-02-24 04:38:49 (6872): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 20:37:47,027 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-02-24 04:38:49 (6872): Guest Log:  *** Listing of results directory ***
2025-02-24 04:38:49 (6872): Guest Log: total 3852
2025-02-24 04:38:49 (6872): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Feb 21 11:59 pilot3.tar.gz
2025-02-24 04:38:49 (6872): Guest Log: -rwx------. 1 atlas atlas   35865 Feb 21 12:07 runpilot2-wrapper.sh
2025-02-24 04:38:49 (6872): Guest Log: -rw-r--r--. 1 atlas atlas    5118 Feb 21 12:07 queuedata.json
2025-02-24 04:38:49 (6872): Guest Log: -rwxr-xr-x. 1 atlas atlas   11219 Feb 23 20:29 init_data.xml
2025-02-24 04:38:49 (6872): Guest Log: -rwxr-xr-x. 1 atlas atlas  503564 Feb 23 20:29 input.tar.gz
2025-02-24 04:38:49 (6872): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Feb 23 20:29 start_atlas.sh
2025-02-24 04:38:49 (6872): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb 23 20:29 EVNT.43092757._001146.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 04:38:49 (6872): Guest Log: -rw-r--r--. 1 atlas atlas    2556 Feb 23 20:29 pandaJob.out
2025-02-24 04:38:49 (6872): Guest Log: -rw-------. 1 atlas atlas     424 Feb 23 20:29 setup.sh.local
2025-02-24 04:38:49 (6872): Guest Log: -rw-------. 1 atlas atlas  987736 Feb 23 20:32 agis_schedconf.cvmfs.json
2025-02-24 04:38:49 (6872): Guest Log: -rw-------. 1 atlas atlas 1582569 Feb 23 20:32 agis_ddmendpoints.agis.ALL.json
2025-02-24 04:38:49 (6872): Guest Log: drwx------. 4 atlas atlas    4096 Feb 23 20:32 pilot3
2025-02-24 04:38:49 (6872): Guest Log: -rw-------. 1 atlas atlas    1012 Feb 23 20:37 memory_monitor_summary.json
2025-02-24 04:38:49 (6872): Guest Log: -rw-------. 1 atlas atlas   22014 Feb 23 20:37 log.43205075._057338.job.log.tgz.1
2025-02-24 04:38:49 (6872): Guest Log: -rw-------. 1 atlas atlas      95 Feb 23 20:38 pilot_heartbeat.json
2025-02-24 04:38:49 (6872): Guest Log: -rw-------. 1 atlas atlas    8444 Feb 23 20:38 heartbeat.json
2025-02-24 04:38:49 (6872): Guest Log: -rw-------. 1 atlas atlas    4461 Feb 23 20:38 pilotlog.txt
2025-02-24 04:38:49 (6872): Guest Log: -rw-------. 1 atlas atlas   80364 Feb 23 20:38 log.43205075._057338.job.log.1
2025-02-24 04:38:49 (6872): Guest Log: -rw-------. 1 atlas atlas     188 Feb 23 20:38 output.list
2025-02-24 04:38:49 (6872): Guest Log: -rw-r--r--. 1 atlas atlas     620 Feb 23 20:38 runtime_log
2025-02-24 04:38:49 (6872): Guest Log: -rw-------. 1 atlas atlas  122880 Feb 23 20:38 result.tar.gz
2025-02-24 04:38:49 (6872): Guest Log: -rw-r--r--. 1 atlas atlas   11256 Feb 23 20:38 runtime_log.err
2025-02-24 04:38:49 (6872): Guest Log: -rw-------. 1 atlas atlas     796 Feb 23 20:38 A2pKDmbzg56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmdLdKDmIrw00n.diag
2025-02-24 04:38:49 (6872): Guest Log: Looking for outputfile HITS.43205075._057338.pool.root.1
2025-02-24 04:38:49 (6872): Guest Log: No HITS file was produced
2025-02-24 04:38:49 (6872): Guest Log: Successfully finished the ATLAS job!
2025-02-24 04:38:49 (6872): Guest Log: Copying the results back to the shared directory!
2025-02-24 04:38:49 (6872): Guest Log:  *** Contents of shared directory: ***
2025-02-24 04:38:49 (6872): Guest Log: total 334232
2025-02-24 04:38:49 (6872): Guest Log: -rwxrwxrwx. 1 root root 341592956 Feb 23 20:27 ATLAS.root_0
2025-02-24 04:38:49 (6872): Guest Log: -rwxrwxrwx. 1 root root     11219 Feb 23 20:27 init_data.xml
2025-02-24 04:38:49 (6872): Guest Log: -rwxrwxrwx. 1 root root    503564 Feb 23 20:17 input.tar.gz
2025-02-24 04:38:49 (6872): Guest Log: -rwxrwxrwx. 1 root root    122880 Feb 23  2025 result.tar.gz
2025-02-24 04:38:49 (6872): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 20:17 start_atlas.sh
2025-02-24 04:38:49 (6872): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 04:38:49 (6872): VM Completion File Detected.
2025-02-24 04:38:49 (6872): Powering off VM.
2025-02-24 04:38:50 (6872): Successfully stopped VM.
2025-02-24 04:38:50 (6872): Deregistering VM. (boinc_5f55842d5f65c614, slot#0)
2025-02-24 04:38:50 (6872): Removing network bandwidth throttle group from VM.
2025-02-24 04:38:50 (6872): Removing VM from VirtualBox.
04:38:55 (6872): called boinc_finish(0)

</stderr_txt>
]]>

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