Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:58:38 (1436775): wrapper (7.7.26015): starting
14:58:38 (1436775): wrapper: running run_atlas (--nthreads 10)
[2025-02-23 14:58:38] Arguments: --nthreads 10
[2025-02-23 14:58:38] Threads: 10
[2025-02-23 14:58:38] Checking for CVMFS
[2025-02-23 14:58:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-23 14:58:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-23 14:58:39] Running cvmfs_config stat atlas.cern.ch
[2025-02-23 14:58:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-23 14:58:41] 2.11.5.0 9248 75035 247136 142986 3 71 18954555 37641217 16823 130560 0 2414535 98.850 6734946 31052 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-23 14:58:41] CVMFS is ok
[2025-02-23 14:58:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 14:58:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 14:58:41] Further information can be found at the LHC@home message board.
[2025-02-23 14:58:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 14:58:41] Checking for apptainer binary...
[2025-02-23 14:58:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-23 14:58:41] Running /usr/bin/apptainer --version
[2025-02-23 14:58:41] apptainer version 1.3.6-1.el9
[2025-02-23 14:58:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 14:58:41] c-6-7.aglt2.org
[2025-02-23 14:58:41] apptainer works
[2025-02-23 14:58:41] Set ATHENA_PROC_NUMBER=10
[2025-02-23 14:58:41] Set ATHENA_CORE_NUMBER=10
[2025-02-23 14:58:41] Starting ATLAS job with PandaID=6525439896
[2025-02-23 14:58:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 17:06:42]  *** The last 200 lines of the pilot log: ***
[2025-02-24 17:06:42] 2025-02-24 22:06:22,349 | INFO     | monitor loop #4735: job 0:6525439896 is in state 'finished'
[2025-02-24 17:06:42] 2025-02-24 22:06:22,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-24 17:06:42] 2025-02-24 22:06:24,859 | INFO     | monitor loop #4736: job 0:6525439896 is in state 'finished'
[2025-02-24 17:06:42] 2025-02-24 22:06:24,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-24 17:06:42] 2025-02-24 22:06:26,031 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-24 17:06:42] 2025-02-24 22:06:26,032 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6525439896/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 17:06:42] 2025-02-24 22:06:26,032 | INFO     | extracted standard info from prmon json
[2025-02-24 17:06:42] 2025-02-24 22:06:26,033 | INFO     | extracted standard memory fields from prmon json
[2025-02-24 17:06:42] 2025-02-24 22:06:26,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-24 17:06:42] 2025-02-24 22:06:26,033 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-24 17:06:42] 2025-02-24 22:06:26,033 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-24 17:06:42] 2025-02-24 22:06:26,070 | INFO     | fitting pss+swap vs Time
[2025-02-24 17:06:42] 2025-02-24 22:06:26,074 | INFO     | model: linear, x: [1740340933.0, 1740340995.0, 1740341055.0, 1740341117.0, 1740341177.0, 1740341239.0, 1740341300.0, 1740341360.0, 1740341421.0, 1740341482.0, 1740
[2025-02-24 17:06:42] 2025-02-24 22:06:26,076 | INFO     | sum of square deviations: 1130293407617.1135
[2025-02-24 17:06:42] 2025-02-24 22:06:26,147 | INFO     | sum of deviations: 1510284079806.547
[2025-02-24 17:06:42] 2025-02-24 22:06:26,148 | INFO     | mean x: 1740387842.7693307
[2025-02-24 17:06:42] 2025-02-24 22:06:26,151 | INFO     | mean y: 2197853.9564652373
[2025-02-24 17:06:42] 2025-02-24 22:06:26,151 | INFO     | -- intersect: -2323286868.780038
[2025-02-24 17:06:42] 2025-02-24 22:06:26,151 | INFO     | intersect: -2323286868.780038
[2025-02-24 17:06:42] 2025-02-24 22:06:26,154 | INFO     | chi2: 8.883024345116084
[2025-02-24 17:06:42] 2025-02-24 22:06:26,156 | INFO     | model: linear, x: [1740340933.0, 1740340995.0, 1740341055.0, 1740341117.0, 1740341177.0, 1740341239.0, 1740341300.0, 1740341360.0, 1740341421.0, 1740341482.0, 1740
[2025-02-24 17:06:42] 2025-02-24 22:06:26,157 | INFO     | sum of square deviations: 1119312939591.644
[2025-02-24 17:06:42] 2025-02-24 22:06:26,235 | INFO     | sum of deviations: 1618528155685.7498
[2025-02-24 17:06:42] 2025-02-24 22:06:26,236 | INFO     | mean x: 1740387690.2718384
[2025-02-24 17:06:42] 2025-02-24 22:06:26,237 | INFO     | mean y: 2199354.21642764
[2025-02-24 17:06:42] 2025-02-24 22:06:26,237 | INFO     | -- intersect: -2514403803.7364593
[2025-02-24 17:06:42] 2025-02-24 22:06:26,237 | INFO     | intersect: -2514403803.7364593
[2025-02-24 17:06:42] 2025-02-24 22:06:26,239 | INFO     | chi2: 8.186774484384907
[2025-02-24 17:06:42] 2025-02-24 22:06:26,240 | INFO     | current chi2=8.186774484384907 (change=7.837982129520757 %)
[2025-02-24 17:06:42] 2025-02-24 22:06:26,240 | INFO     | right removable region: 1533
[2025-02-24 17:06:42] 2025-02-24 22:06:26,242 | INFO     | model: linear, x: [1740341239.0, 1740341300.0, 1740341360.0, 1740341421.0, 1740341482.0, 1740341544.0, 1740341605.0, 1740341666.0, 1740341727.0, 1740341788.0, 1740
[2025-02-24 17:06:42] 2025-02-24 22:06:26,244 | INFO     | sum of square deviations: 1119312405110.733
[2025-02-24 17:06:42] 2025-02-24 22:06:26,342 | INFO     | sum of deviations: 1167756554536.5488
[2025-02-24 17:06:42] 2025-02-24 22:06:26,343 | INFO     | mean x: 1740387995.2705345
[2025-02-24 17:06:42] 2025-02-24 22:06:26,343 | INFO     | mean y: 2202608.6492829206
[2025-02-24 17:06:42] 2025-02-24 22:06:26,343 | INFO     | -- intersect: -1813509858.7854292
[2025-02-24 17:06:42] 2025-02-24 22:06:26,343 | INFO     | intersect: -1813509858.7854292
[2025-02-24 17:06:42] 2025-02-24 22:06:26,345 | INFO     | chi2: 6.472659994714418
[2025-02-24 17:06:42] 2025-02-24 22:06:26,346 | INFO     | current chi2=6.472659994714418 (change=27.134501232419705 %)
[2025-02-24 17:06:42] 2025-02-24 22:06:26,347 | INFO     | model: linear, x: [1740341544.0, 1740341605.0, 1740341666.0, 1740341727.0, 1740341788.0, 1740341848.0, 1740341909.0, 1740341970.0, 1740342032.0, 1740342093.0, 1740
[2025-02-24 17:06:42] 2025-02-24 22:06:26,349 | INFO     | sum of square deviations: 1108402753145.3389
[2025-02-24 17:06:42] 2025-02-24 22:06:26,441 | INFO     | sum of deviations: 941120879057.4427
[2025-02-24 17:06:42] 2025-02-24 22:06:26,441 | INFO     | mean x: 1740388147.7717462
[2025-02-24 17:06:42] 2025-02-24 22:06:26,441 | INFO     | mean y: 2205776.1445389143
[2025-02-24 17:06:42] 2025-02-24 22:06:26,441 | INFO     | -- intersect: -1475520275.0441208
[2025-02-24 17:06:42] 2025-02-24 22:06:26,441 | INFO     | intersect: -1475520275.0441208
[2025-02-24 17:06:42] 2025-02-24 22:06:26,444 | INFO     | chi2: 5.506617837710713
[2025-02-24 17:06:42] 2025-02-24 22:06:26,444 | INFO     | current chi2=5.506617837710713 (change=14.924963736587063 %)
[2025-02-24 17:06:42] 2025-02-24 22:06:26,444 | INFO     | left removable region: 20
[2025-02-24 17:06:42] 2025-02-24 22:06:26,446 | INFO     | model: linear, x: [1740342155.0, 1740342214.0, 1740342277.0, 1740342336.0, 1740342399.0, 1740342460.0, 1740342521.0, 1740342583.0, 1740342641.0, 1740342703.0, 1740
[2025-02-24 17:06:42] 2025-02-24 22:06:26,447 | INFO     | sum of square deviations: 1073969547681.5927
[2025-02-24 17:06:42] 2025-02-24 22:06:26,507 | INFO     | sum of deviations: 565867306927.0671
[2025-02-24 17:06:42] 2025-02-24 22:06:26,507 | INFO     | mean x: 1740388269.775281
[2025-02-24 17:06:42] 2025-02-24 22:06:26,507 | INFO     | mean y: 2214330.4884335757
[2025-02-24 17:06:42] 2025-02-24 22:06:26,507 | INFO     | -- intersect: -914784503.7440389
[2025-02-24 17:06:42] 2025-02-24 22:06:26,507 | INFO     | intersect: -914784503.7440389
[2025-02-24 17:06:42] 2025-02-24 22:06:26,509 | INFO     | chi2: 2.4434752191148688
[2025-02-24 17:06:42] 2025-02-24 22:06:26,510 | INFO     | -- intersect: -914784503.7440389
[2025-02-24 17:06:42] 2025-02-24 22:06:26,510 | INFO     | current memory leak: 0.53 B/s (using 1513 data points, chi2=2.44)
[2025-02-24 17:06:42] 2025-02-24 22:06:26,512 | INFO     | ..............................
[2025-02-24 17:06:42] 2025-02-24 22:06:26,512 | INFO     | . Timing measurements:
[2025-02-24 17:06:42] 2025-02-24 22:06:26,513 | INFO     | . get job = 0 s
[2025-02-24 17:06:42] 2025-02-24 22:06:26,513 | INFO     | . initial setup = 6 s
[2025-02-24 17:06:42] 2025-02-24 22:06:26,513 | INFO     | . payload setup = 35 s
[2025-02-24 17:06:42] 2025-02-24 22:06:26,513 | INFO     | . stage-in = 0 s
[2025-02-24 17:06:42] 2025-02-24 22:06:26,513 | INFO     | . payload execution = 93854 s
[2025-02-24 17:06:42] 2025-02-24 22:06:26,513 | INFO     | . stage-out = 4 s
[2025-02-24 17:06:42] 2025-02-24 22:06:26,513 | INFO     | . log creation = 1 s
[2025-02-24 17:06:42] 2025-02-24 22:06:26,513 | INFO     | ..............................
[2025-02-24 17:06:42] 2025-02-24 22:06:26,922 | INFO     | 
[2025-02-24 17:06:42] 2025-02-24 22:06:26,923 | INFO     | job summary report
[2025-02-24 17:06:42] 2025-02-24 22:06:26,924 | INFO     | --------------------------------------------------
[2025-02-24 17:06:42] 2025-02-24 22:06:26,924 | INFO     | PanDA job id: 6525439896
[2025-02-24 17:06:42] 2025-02-24 22:06:26,924 | INFO     | task id: 43205094
[2025-02-24 17:06:42] 2025-02-24 22:06:26,924 | INFO     | errors: (none)
[2025-02-24 17:06:42] 2025-02-24 22:06:26,924 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 17:06:42] 2025-02-24 22:06:26,924 | INFO     | pilot state: finished 
[2025-02-24 17:06:42] 2025-02-24 22:06:26,924 | INFO     | transexitcode: 0
[2025-02-24 17:06:42] 2025-02-24 22:06:26,924 | INFO     | exeerrorcode: 0
[2025-02-24 17:06:42] 2025-02-24 22:06:26,924 | INFO     | exeerrordiag: 
[2025-02-24 17:06:42] 2025-02-24 22:06:26,925 | INFO     | exitcode: 0
[2025-02-24 17:06:42] 2025-02-24 22:06:26,925 | INFO     | exitmsg: OK
[2025-02-24 17:06:42] 2025-02-24 22:06:26,925 | INFO     | cpuconsumptiontime: 114656 s
[2025-02-24 17:06:42] 2025-02-24 22:06:26,925 | INFO     | nevents: 400
[2025-02-24 17:06:42] 2025-02-24 22:06:26,925 | INFO     | neventsw: 0
[2025-02-24 17:06:42] 2025-02-24 22:06:26,925 | INFO     | pid: 1480647
[2025-02-24 17:06:42] 2025-02-24 22:06:26,925 | INFO     | pgrp: 1480647
[2025-02-24 17:06:42] 2025-02-24 22:06:26,925 | INFO     | corecount: 10
[2025-02-24 17:06:42] 2025-02-24 22:06:26,925 | INFO     | event service: False
[2025-02-24 17:06:42] 2025-02-24 22:06:26,926 | INFO     | sizes: {0: 2383084, 1: 2383168, 2: 2383367, 14: 2383367, 24: 2383395, 27: 2383629, 36: 2383785, 93893: 2448497, 93898: 2457438, 93899: 2457494, 93915: 2457664}
[2025-02-24 17:06:42] 2025-02-24 22:06:26,926 | INFO     | --------------------------------------------------
[2025-02-24 17:06:42] 2025-02-24 22:06:26,926 | INFO     | 
[2025-02-24 17:06:42] 2025-02-24 22:06:26,926 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-24 17:06:42] 2025-02-24 22:06:27,004 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,004 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,004 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,004 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,005 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,005 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,005 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,005 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,005 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,005 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,005 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,005 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,005 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,005 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,006 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,006 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,006 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 17:06:42] 2025-02-24 22:06:27,006 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,006 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 17:06:42] 2025-02-24 22:06:27,006 | INFO     | job 6525439896 has completed (purged errors)
[2025-02-24 17:06:42] 2025-02-24 22:06:27,006 | INFO     | overall cleanup function is called
[2025-02-24 17:06:42] 2025-02-24 22:06:28,016 | INFO     | --- collectZombieJob: --- 10, [1480647]
[2025-02-24 17:06:42] 2025-02-24 22:06:28,017 | INFO     | zombie collector waiting for pid 1480647
[2025-02-24 17:06:42] 2025-02-24 22:06:28,017 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 17:06:42] 2025-02-24 22:06:28,017 | INFO     | collected zombie processes
[2025-02-24 17:06:42] 2025-02-24 22:06:28,017 | INFO     | will attempt to kill all subprocesses of pid=1480647
[2025-02-24 17:06:42] 2025-02-24 22:06:28,499 | INFO     | process IDs to be killed: [1480647] (in reverse order)
[2025-02-24 17:06:42] 2025-02-24 22:06:28,628 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 17:06:42] 2025-02-24 22:06:28,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 17:06:42] 2025-02-24 22:06:28,729 | INFO     | did not find any defunct processes belonging to 1480647
[2025-02-24 17:06:42] 2025-02-24 22:06:28,758 | INFO     | did not find any defunct processes belonging to 1480647
[2025-02-24 17:06:42] 2025-02-24 22:06:28,758 | INFO     | ready for new job
[2025-02-24 17:06:42] 2025-02-24 22:06:28,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 17:06:42] 2025-02-24 22:06:28,768 | INFO     | **************************************
[2025-02-24 17:06:42] 2025-02-24 22:06:28,769 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 17:06:42] 2025-02-24 22:06:28,769 | INFO     | **************************************
[2025-02-24 17:06:42] 2025-02-24 22:06:28,769 | INFO     | 
[2025-02-24 17:06:42] 2025-02-24 22:06:28,771 | INFO     | architecture information:
[2025-02-24 17:06:42] 2025-02-24 22:06:28,772 | INFO     | executing command: cat /etc/os-release
[2025-02-24 17:06:42] 2025-02-24 22:06:28,791 | INFO     | cat /etc/os-release:
[2025-02-24 17:06:42] NAME="CentOS Linux"
[2025-02-24 17:06:42] VERSION="7 (Core)"
[2025-02-24 17:06:42] ID="centos"
[2025-02-24 17:06:42] ID_LIKE="rhel fedora"
[2025-02-24 17:06:42] VERSION_ID="7"
[2025-02-24 17:06:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 17:06:42] ANSI_COLOR="0;31"
[2025-02-24 17:06:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 17:06:42] HOME_URL="https://www.centos.org/"
[2025-02-24 17:06:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 17:06:42] 
[2025-02-24 17:06:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 17:06:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 17:06:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 17:06:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 17:06:42] 
[2025-02-24 17:06:42] 2025-02-24 22:06:28,792 | INFO     | **************************************
[2025-02-24 17:06:42] 2025-02-24 22:06:29,295 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-24 17:06:42] 2025-02-24 22:06:29,318 | INFO     | sufficient remaining disk space (76104597504 B)
[2025-02-24 17:06:42] 2025-02-24 22:06:29,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 17:06:42] 2025-02-24 22:06:29,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 17:06:42] 2025-02-24 22:06:29,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 17:06:42] 2025-02-24 22:06:29,320 | INFO     | aborting loop
[2025-02-24 17:06:42] 2025-02-24 22:06:29,320 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-24 17:06:42] 2025-02-24 22:06:29,321 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 17:06:42] 2025-02-24 22:06:29,321 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 17:06:42] 2025-02-24 22:06:29,321 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 17:06:42] 2025-02-24 22:06:29,723 | INFO     | all job control threads have been joined
[2025-02-24 17:06:42] 2025-02-24 22:06:29,805 | INFO     | all data control threads have been joined
[2025-02-24 17:06:42] 2025-02-24 22:06:30,324 | INFO     | [job] retrieve thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:30,325 | INFO     | [job] job monitor thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:30,541 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:30,574 | INFO     | [data] copytool_in thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:30,716 | INFO     | [payload] validate_post thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:30,732 | INFO     | [job] control thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:30,769 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 17:06:42] 2025-02-24 22:06:30,774 | INFO     | all payload control threads have been joined
[2025-02-24 17:06:42] 2025-02-24 22:06:30,811 | INFO     | [data] control thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:30,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 17:06:42] 2025-02-24 22:06:30,961 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:31,000 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:31,133 | INFO     | [payload] failed_post thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:31,378 | INFO     | [job] validate thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:31,640 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:31,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 17:06:42] 2025-02-24 22:06:31,786 | INFO     | [payload] control thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:32,776 | INFO     | [data] copytool_out thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:32,777 | INFO     | [job] queue monitor thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:34,853 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 17:06:42] 2025-02-24 22:06:36,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140522299029312)>', '<ExcThread(monitor, started 140521582352128)>']
[2025-02-24 17:06:42] 2025-02-24 22:06:37,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 17:06:42] 2025-02-24 22:06:37,372 | INFO     | [monitor] control thread has ended
[2025-02-24 17:06:42] 2025-02-24 22:06:41,636 | INFO     | all workflow threads have been joined
[2025-02-24 17:06:42] 2025-02-24 22:06:41,637 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 17:06:42] 2025-02-24 22:06:41,637 | INFO     | traces error code: 0
[2025-02-24 17:06:42] 2025-02-24 22:06:41,638 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 17:06:42] 2025-02-24 22:06:41,835 [wrapper] ==== pilot stdout END ====
[2025-02-24 17:06:42] 2025-02-24 22:06:41,839 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 17:06:42] 2025-02-24 22:06:41,846 [wrapper] pilotpid: 1450724
[2025-02-24 17:06:42] 2025-02-24 22:06:41,849 [wrapper] Pilot exit status: 0
[2025-02-24 17:06:42] 2025-02-24 22:06:41,862 [wrapper] pandaids: 6525439896
[2025-02-24 17:06:42] 2025-02-24 22:06:41,949 [wrapper] cleanup supervisor_pilot 2007321 1450725
[2025-02-24 17:06:42] 2025-02-24 22:06:41,953 [wrapper] Test setup, not cleaning
[2025-02-24 17:06:42] 2025-02-24 22:06:41,959 [wrapper] apfmon messages muted
[2025-02-24 17:06:42] 2025-02-24 22:06:41,963 [wrapper] ==== wrapper stdout END ====
[2025-02-24 17:06:42] 2025-02-24 22:06:41,966 [wrapper] ==== wrapper stderr END ====
[2025-02-24 17:06:42]  *** Error codes and diagnostics ***
[2025-02-24 17:06:42]     "exeErrorCode": 0,
[2025-02-24 17:06:42]     "exeErrorDiag": "",
[2025-02-24 17:06:42]     "pilotErrorCode": 0,
[2025-02-24 17:06:42]     "pilotErrorDiag": "",
[2025-02-24 17:06:42]  *** Listing of results directory ***
[2025-02-24 17:06:42] total 684544
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas    491065 Feb 23 08:17 pilot3.tar.gz
[2025-02-24 17:06:42] -rwx------. 1 boincer umatlas     35865 Feb 23 08:35 runpilot2-wrapper.sh
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas      5118 Feb 23 08:35 queuedata.json
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas       100 Feb 23 14:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 17:06:42] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 23 14:58 run_atlas
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas       105 Feb 23 14:58 job.xml
[2025-02-24 17:06:42] -rw-r--r--. 2 boincer umatlas 343088768 Feb 23 14:58 EVNT.43092757._002013.pool.root.1
[2025-02-24 17:06:42] -rw-r--r--. 2 boincer umatlas     17569 Feb 23 14:58 start_atlas.sh
[2025-02-24 17:06:42] drwxrwx--x. 2 boincer umatlas      4096 Feb 23 14:58 shared
[2025-02-24 17:06:42] -rw-r--r--. 2 boincer umatlas    503553 Feb 23 14:58 input.tar.gz
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas         0 Feb 23 14:58 boinc_lockfile
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas      2549 Feb 23 14:58 pandaJob.out
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas       467 Feb 23 14:58 setup.sh.local
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas    987744 Feb 23 15:00 agis_schedconf.cvmfs.json
[2025-02-24 17:06:42] drwx------. 4 boincer umatlas      4096 Feb 23 15:00 pilot3
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas      6660 Feb 24 17:01 init_data.xml
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas 327737817 Feb 24 17:05 HITS.43205094._039481.pool.root.1
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas       533 Feb 24 17:05 boinc_task_state.xml
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas      1040 Feb 24 17:06 memory_monitor_summary.json
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas        95 Feb 24 17:06 pilot_heartbeat.json
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas   1582569 Feb 24 17:06 agis_ddmendpoints.agis.ALL.json
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas   1774385 Feb 24 17:06 log.43205094._039481.job.log.tgz.1
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas      7738 Feb 24 17:06 heartbeat.json
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas      8192 Feb 24 17:06 boinc_mmap_file
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas        29 Feb 24 17:06 wrapper_checkpoint.txt
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas      4338 Feb 24 17:06 pilotlog.txt
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas  11397946 Feb 24 17:06 log.43205094._039481.job.log.1
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas       357 Feb 24 17:06 output.list
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas       620 Feb 24 17:06 runtime_log
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas  13189120 Feb 24 17:06 result.tar.gz
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas       656 Feb 24 17:06 YQ0NDmnJR66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmuYvKDmXbyc3m.diag
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas     11406 Feb 24 17:06 runtime_log.err
[2025-02-24 17:06:42] -rw-r--r--. 1 boincer umatlas     21777 Feb 24 17:06 stderr.txt
[2025-02-24 17:06:42] HITS file was successfully produced:
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas 327737817 Feb 24 17:05 shared/HITS.pool.root.1
[2025-02-24 17:06:42]  *** Contents of shared directory: ***
[2025-02-24 17:06:42] total 668504
[2025-02-24 17:06:42] -rw-r--r--. 2 boincer umatlas 343088768 Feb 23 14:58 ATLAS.root_0
[2025-02-24 17:06:42] -rw-r--r--. 2 boincer umatlas     17569 Feb 23 14:58 start_atlas.sh
[2025-02-24 17:06:42] -rw-r--r--. 2 boincer umatlas    503553 Feb 23 14:58 input.tar.gz
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas 327737817 Feb 24 17:05 HITS.pool.root.1
[2025-02-24 17:06:42] -rw-------. 1 boincer umatlas  13189120 Feb 24 17:06 result.tar.gz
17:06:43 (1436775): run_atlas exited; CPU time 115485.039982
17:06:43 (1436775): called boinc_finish(0)

</stderr_txt>
]]>

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