Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:00:22 (2234956): wrapper (7.7.26015): starting
14:00:22 (2234956): wrapper: running run_atlas (--nthreads 10)
[2025-02-23 14:00:22] Arguments: --nthreads 10
[2025-02-23 14:00:22] Threads: 10
[2025-02-23 14:00:22] Checking for CVMFS
[2025-02-23 14:00:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-23 14:00:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-23 14:00:24] Running cvmfs_config stat atlas.cern.ch
[2025-02-23 14:00:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-23 14:00:26] 2.11.5.0 3733875 27474 248576 142984 2 482 21329599 37641217 19440 130560 0 4720154 99.388 7487126 30222 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-23 14:00:26] CVMFS is ok
[2025-02-23 14:00:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 14:00:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 14:00:26] Further information can be found at the LHC@home message board.
[2025-02-23 14:00:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 14:00:26] Checking for apptainer binary...
[2025-02-23 14:00:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-23 14:00:26] Running /usr/bin/apptainer --version
[2025-02-23 14:00:26] apptainer version 1.3.6-1.el9
[2025-02-23 14:00:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 14:00:28] c-6-2.aglt2.org
[2025-02-23 14:00:28] apptainer works
[2025-02-23 14:00:28] Set ATHENA_PROC_NUMBER=10
[2025-02-23 14:00:28] Set ATHENA_CORE_NUMBER=10
[2025-02-23 14:00:28] Starting ATLAS job with PandaID=6525292287
[2025-02-23 14:00:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 15:08:52]  *** The last 200 lines of the pilot log: ***
[2025-02-24 15:08:53] 2025-02-24 20:08:17,219 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-24 15:08:53] 2025-02-24 20:08:18,894 | INFO     | PID=2244158 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-24 15:08:53] 2025-02-24 20:08:18,894 | INFO     | .. there are 39 such processes running
[2025-02-24 15:08:53] 2025-02-24 20:08:19,756 | INFO     | monitor loop #4867: job 0:6525292287 is in state 'finished'
[2025-02-24 15:08:53] 2025-02-24 20:08:19,756 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-24 15:08:53] 2025-02-24 20:08:22,284 | INFO     | monitor loop #4868: job 0:6525292287 is in state 'finished'
[2025-02-24 15:08:53] 2025-02-24 20:08:22,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-24 15:08:53] 2025-02-24 20:08:24,795 | INFO     | monitor loop #4869: job 0:6525292287 is in state 'finished'
[2025-02-24 15:08:53] 2025-02-24 20:08:24,795 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-24 15:08:53] 2025-02-24 20:08:27,307 | INFO     | monitor loop #4870: job 0:6525292287 is in state 'finished'
[2025-02-24 15:08:53] 2025-02-24 20:08:27,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-24 15:08:53] 2025-02-24 20:08:29,818 | INFO     | monitor loop #4871: job 0:6525292287 is in state 'finished'
[2025-02-24 15:08:53] 2025-02-24 20:08:29,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-24 15:08:53] 2025-02-24 20:08:30,824 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-24 15:08:53] 2025-02-24 20:08:30,824 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6525292287/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 15:08:53] 2025-02-24 20:08:30,825 | INFO     | extracted standard info from prmon json
[2025-02-24 15:08:53] 2025-02-24 20:08:30,825 | INFO     | extracted standard memory fields from prmon json
[2025-02-24 15:08:53] 2025-02-24 20:08:30,825 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-24 15:08:53] 2025-02-24 20:08:30,826 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-24 15:08:53] 2025-02-24 20:08:30,826 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-24 15:08:53] 2025-02-24 20:08:30,881 | INFO     | fitting pss+swap vs Time
[2025-02-24 15:08:53] 2025-02-24 20:08:30,886 | INFO     | model: linear, x: [1740337561.0, 1740337622.0, 1740337683.0, 1740337744.0, 1740337805.0, 1740337866.0, 1740337928.0, 1740337988.0, 1740338049.0, 1740338110.0, 1740
[2025-02-24 15:08:53] 2025-02-24 20:08:30,891 | INFO     | sum of square deviations: 999128389087.211
[2025-02-24 15:08:53] 2025-02-24 20:08:31,019 | INFO     | sum of deviations: 1857425542308.53
[2025-02-24 15:08:53] 2025-02-24 20:08:31,020 | INFO     | mean x: 1740382579.6377792
[2025-02-24 15:08:53] 2025-02-24 20:08:31,020 | INFO     | mean y: 2171847.3953960733
[2025-02-24 15:08:53] 2025-02-24 20:08:31,020 | INFO     | -- intersect: -3233279263.9090323
[2025-02-24 15:08:53] 2025-02-24 20:08:31,020 | INFO     | intersect: -3233279263.9090323
[2025-02-24 15:08:53] 2025-02-24 20:08:31,026 | INFO     | chi2: 14.405669551080958
[2025-02-24 15:08:53] 2025-02-24 20:08:31,028 | INFO     | model: linear, x: [1740337561.0, 1740337622.0, 1740337683.0, 1740337744.0, 1740337805.0, 1740337866.0, 1740337928.0, 1740337988.0, 1740338049.0, 1740338110.0, 1740
[2025-02-24 15:08:53] 2025-02-24 20:08:31,033 | INFO     | sum of square deviations: 989015972077.7275
[2025-02-24 15:08:53] 2025-02-24 20:08:31,117 | INFO     | sum of deviations: 2136869649483.1174
[2025-02-24 15:08:53] 2025-02-24 20:08:31,117 | INFO     | mean x: 1740382427.138587
[2025-02-24 15:08:53] 2025-02-24 20:08:31,117 | INFO     | mean y: 2176057.700407609
[2025-02-24 15:08:53] 2025-02-24 20:08:31,118 | INFO     | -- intersect: -3758097276.6456356
[2025-02-24 15:08:53] 2025-02-24 20:08:31,118 | INFO     | intersect: -3758097276.6456356
[2025-02-24 15:08:53] 2025-02-24 20:08:31,120 | INFO     | chi2: 12.167788531512837
[2025-02-24 15:08:53] 2025-02-24 20:08:31,120 | INFO     | current chi2=12.167788531512837 (change=15.534724100346986 %)
[2025-02-24 15:08:53] 2025-02-24 20:08:31,125 | INFO     | right removable region: 1471
[2025-02-24 15:08:53] 2025-02-24 20:08:31,126 | INFO     | model: linear, x: [1740337866.0, 1740337928.0, 1740337988.0, 1740338049.0, 1740338110.0, 1740338171.0, 1740338232.0, 1740338294.0, 1740338354.0, 1740338415.0, 1740
[2025-02-24 15:08:53] 2025-02-24 20:08:31,127 | INFO     | sum of square deviations: 989015577285.1708
[2025-02-24 15:08:53] 2025-02-24 20:08:31,243 | INFO     | sum of deviations: 1469581900080.5793
[2025-02-24 15:08:53] 2025-02-24 20:08:31,244 | INFO     | mean x: 1740382732.1399457
[2025-02-24 15:08:53] 2025-02-24 20:08:31,244 | INFO     | mean y: 2177694.2350543477
[2025-02-24 15:08:53] 2025-02-24 20:08:31,244 | INFO     | -- intersect: -2583863437.07484
[2025-02-24 15:08:53] 2025-02-24 20:08:31,244 | INFO     | intersect: -2583863437.07484
[2025-02-24 15:08:53] 2025-02-24 20:08:31,250 | INFO     | chi2: 11.103551293630748
[2025-02-24 15:08:53] 2025-02-24 20:08:31,251 | INFO     | current chi2=11.103551293630748 (change=22.922351826419824 %)
[2025-02-24 15:08:53] 2025-02-24 20:08:31,251 | INFO     | left removable region: 10
[2025-02-24 15:08:53] 2025-02-24 20:08:31,252 | INFO     | model: linear, x: [1740338171.0, 1740338232.0, 1740338294.0, 1740338354.0, 1740338415.0, 1740338477.0, 1740338537.0, 1740338599.0, 1740338659.0, 1740338723.0, 1740
[2025-02-24 15:08:53] 2025-02-24 20:08:31,254 | INFO     | sum of square deviations: 967008665963.4948
[2025-02-24 15:08:53] 2025-02-24 20:08:31,438 | INFO     | sum of deviations: 1497531092705.7925
[2025-02-24 15:08:53] 2025-02-24 20:08:31,438 | INFO     | mean x: 1740382701.6427104
[2025-02-24 15:08:53] 2025-02-24 20:08:31,438 | INFO     | mean y: 2186226.355920602
[2025-02-24 15:08:53] 2025-02-24 20:08:31,439 | INFO     | -- intersect: -2693009070.906965
[2025-02-24 15:08:53] 2025-02-24 20:08:31,439 | INFO     | intersect: -2693009070.906965
[2025-02-24 15:08:53] 2025-02-24 20:08:31,441 | INFO     | chi2: 7.338983111850276
[2025-02-24 15:08:53] 2025-02-24 20:08:31,441 | INFO     | -- intersect: -2693009070.906965
[2025-02-24 15:08:53] 2025-02-24 20:08:31,441 | INFO     | current memory leak: 1.55 B/s (using 1461 data points, chi2=7.34)
[2025-02-24 15:08:53] 2025-02-24 20:08:31,461 | INFO     | ..............................
[2025-02-24 15:08:53] 2025-02-24 20:08:31,461 | INFO     | . Timing measurements:
[2025-02-24 15:08:53] 2025-02-24 20:08:31,461 | INFO     | . get job = 0 s
[2025-02-24 15:08:53] 2025-02-24 20:08:31,462 | INFO     | . initial setup = 8 s
[2025-02-24 15:08:53] 2025-02-24 20:08:31,462 | INFO     | . payload setup = 66 s
[2025-02-24 15:08:53] 2025-02-24 20:08:31,462 | INFO     | . stage-in = 0 s
[2025-02-24 15:08:53] 2025-02-24 20:08:31,462 | INFO     | . payload execution = 90133 s
[2025-02-24 15:08:53] 2025-02-24 20:08:31,462 | INFO     | . stage-out = 8 s
[2025-02-24 15:08:53] 2025-02-24 20:08:31,462 | INFO     | . log creation = 1 s
[2025-02-24 15:08:53] 2025-02-24 20:08:31,462 | INFO     | ..............................
[2025-02-24 15:08:53] 2025-02-24 20:08:31,894 | INFO     | 
[2025-02-24 15:08:53] 2025-02-24 20:08:31,895 | INFO     | job summary report
[2025-02-24 15:08:53] 2025-02-24 20:08:31,895 | INFO     | --------------------------------------------------
[2025-02-24 15:08:53] 2025-02-24 20:08:31,895 | INFO     | PanDA job id: 6525292287
[2025-02-24 15:08:53] 2025-02-24 20:08:31,895 | INFO     | task id: 43078919
[2025-02-24 15:08:53] 2025-02-24 20:08:31,895 | INFO     | errors: (none)
[2025-02-24 15:08:53] 2025-02-24 20:08:31,895 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 15:08:53] 2025-02-24 20:08:31,895 | INFO     | pilot state: finished 
[2025-02-24 15:08:53] 2025-02-24 20:08:31,895 | INFO     | transexitcode: 0
[2025-02-24 15:08:53] 2025-02-24 20:08:31,902 | INFO     | exeerrorcode: 0
[2025-02-24 15:08:53] 2025-02-24 20:08:31,902 | INFO     | exeerrordiag: 
[2025-02-24 15:08:53] 2025-02-24 20:08:31,902 | INFO     | exitcode: 0
[2025-02-24 15:08:53] 2025-02-24 20:08:31,902 | INFO     | exitmsg: OK
[2025-02-24 15:08:53] 2025-02-24 20:08:31,902 | INFO     | cpuconsumptiontime: 118063 s
[2025-02-24 15:08:53] 2025-02-24 20:08:31,902 | INFO     | nevents: 400
[2025-02-24 15:08:53] 2025-02-24 20:08:31,902 | INFO     | neventsw: 0
[2025-02-24 15:08:53] 2025-02-24 20:08:31,902 | INFO     | pid: 2268475
[2025-02-24 15:08:53] 2025-02-24 20:08:31,902 | INFO     | pgrp: 2268475
[2025-02-24 15:08:53] 2025-02-24 20:08:31,903 | INFO     | corecount: 10
[2025-02-24 15:08:53] 2025-02-24 20:08:31,903 | INFO     | event service: False
[2025-02-24 15:08:53] 2025-02-24 20:08:31,903 | INFO     | sizes: {0: 2383134, 1: 2383389, 2: 2383417, 13: 2383417, 25: 2383473, 36: 2383501, 47: 2383657, 52: 2383919, 58: 2383947, 90205: 2446374, 90214: 2455315, 90216: 24
[2025-02-24 15:08:53] 2025-02-24 20:08:31,903 | INFO     | --------------------------------------------------
[2025-02-24 15:08:53] 2025-02-24 20:08:31,903 | INFO     | 
[2025-02-24 15:08:53] 2025-02-24 20:08:31,903 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-24 15:08:53] 2025-02-24 20:08:32,117 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,117 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,117 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,118 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,118 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,118 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,118 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,118 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,118 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,118 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,118 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,118 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,119 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,119 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,119 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,119 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,119 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,119 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 15:08:53] 2025-02-24 20:08:32,119 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,119 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 15:08:53] 2025-02-24 20:08:32,120 | INFO     | job 6525292287 has completed (purged errors)
[2025-02-24 15:08:53] 2025-02-24 20:08:32,120 | INFO     | overall cleanup function is called
[2025-02-24 15:08:53] 2025-02-24 20:08:33,153 | INFO     | --- collectZombieJob: --- 10, [2268475]
[2025-02-24 15:08:53] 2025-02-24 20:08:33,154 | INFO     | zombie collector waiting for pid 2268475
[2025-02-24 15:08:53] 2025-02-24 20:08:33,154 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 15:08:53] 2025-02-24 20:08:33,154 | INFO     | collected zombie processes
[2025-02-24 15:08:53] 2025-02-24 20:08:33,154 | INFO     | will attempt to kill all subprocesses of pid=2268475
[2025-02-24 15:08:53] 2025-02-24 20:08:34,280 | INFO     | process IDs to be killed: [2268475] (in reverse order)
[2025-02-24 15:08:53] 2025-02-24 20:08:34,503 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 15:08:53] 2025-02-24 20:08:34,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 15:08:53] 2025-02-24 20:08:34,579 | INFO     | did not find any defunct processes belonging to 2268475
[2025-02-24 15:08:53] 2025-02-24 20:08:34,630 | INFO     | did not find any defunct processes belonging to 2268475
[2025-02-24 15:08:53] 2025-02-24 20:08:34,630 | INFO     | ready for new job
[2025-02-24 15:08:53] 2025-02-24 20:08:34,630 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 15:08:53] 2025-02-24 20:08:34,652 | INFO     | **************************************
[2025-02-24 15:08:53] 2025-02-24 20:08:34,653 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 15:08:53] 2025-02-24 20:08:34,653 | INFO     | **************************************
[2025-02-24 15:08:53] 2025-02-24 20:08:34,653 | INFO     | 
[2025-02-24 15:08:53] 2025-02-24 20:08:34,663 | INFO     | architecture information:
[2025-02-24 15:08:53] 2025-02-24 20:08:34,664 | INFO     | executing command: cat /etc/os-release
[2025-02-24 15:08:53] 2025-02-24 20:08:34,773 | INFO     | cat /etc/os-release:
[2025-02-24 15:08:53] NAME="CentOS Linux"
[2025-02-24 15:08:53] VERSION="7 (Core)"
[2025-02-24 15:08:53] ID="centos"
[2025-02-24 15:08:53] ID_LIKE="rhel fedora"
[2025-02-24 15:08:53] VERSION_ID="7"
[2025-02-24 15:08:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 15:08:53] ANSI_COLOR="0;31"
[2025-02-24 15:08:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 15:08:53] HOME_URL="https://www.centos.org/"
[2025-02-24 15:08:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 15:08:53] 
[2025-02-24 15:08:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 15:08:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 15:08:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 15:08:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 15:08:53] 
[2025-02-24 15:08:53] 2025-02-24 20:08:34,773 | INFO     | **************************************
[2025-02-24 15:08:53] 2025-02-24 20:08:35,277 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-24 15:08:53] 2025-02-24 20:08:35,432 | INFO     | sufficient remaining disk space (75391565824 B)
[2025-02-24 15:08:53] 2025-02-24 20:08:35,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 15:08:53] 2025-02-24 20:08:35,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 15:08:53] 2025-02-24 20:08:35,433 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-24 15:08:53] 2025-02-24 20:08:35,433 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 15:08:53] 2025-02-24 20:08:35,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 15:08:53] 2025-02-24 20:08:35,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 15:08:53] 2025-02-24 20:08:35,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 15:08:53] 2025-02-24 20:08:35,866 | INFO     | aborting loop
[2025-02-24 15:08:53] 2025-02-24 20:08:36,200 | INFO     | all payload control threads have been joined
[2025-02-24 15:08:53] 2025-02-24 20:08:36,423 | INFO     | all data control threads have been joined
[2025-02-24 15:08:53] 2025-02-24 20:08:36,438 | INFO     | [job] retrieve thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:36,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 15:08:53] 2025-02-24 20:08:36,845 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:36,870 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:36,870 | INFO     | [payload] validate_post thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:36,871 | INFO     | [job] job monitor thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:36,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 15:08:53] 2025-02-24 20:08:36,971 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:36,973 | INFO     | all job control threads have been joined
[2025-02-24 15:08:53] 2025-02-24 20:08:36,983 | INFO     | [job] validate thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:37,207 | INFO     | [payload] control thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:37,435 | INFO     | [data] control thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:37,604 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:37,915 | INFO     | [payload] failed_post thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:37,939 | INFO     | [data] copytool_in thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:37,943 | INFO     | [job] queue monitor thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:37,984 | INFO     | [job] control thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:38,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 15:08:53] 2025-02-24 20:08:38,698 | INFO     | [data] copytool_out thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:42,672 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 15:08:53] 2025-02-24 20:08:44,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755773912896)>', '<ExcThread(monitor, started 139755006191360)>']
[2025-02-24 15:08:53] 2025-02-24 20:08:45,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 15:08:53] 2025-02-24 20:08:45,511 | INFO     | [monitor] control thread has ended
[2025-02-24 15:08:53] 2025-02-24 20:08:49,790 | INFO     | all workflow threads have been joined
[2025-02-24 15:08:53] 2025-02-24 20:08:49,791 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 15:08:53] 2025-02-24 20:08:49,791 | INFO     | traces error code: 0
[2025-02-24 15:08:53] 2025-02-24 20:08:49,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 15:08:53] 2025-02-24 20:08:50,898 [wrapper] ==== pilot stdout END ====
[2025-02-24 15:08:53] 2025-02-24 20:08:51,000 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 15:08:53] 2025-02-24 20:08:51,017 [wrapper] pilotpid: 2244158
[2025-02-24 15:08:53] 2025-02-24 20:08:51,048 [wrapper] Pilot exit status: 0
[2025-02-24 15:08:53] 2025-02-24 20:08:51,184 [wrapper] pandaids: 6525292287
[2025-02-24 15:08:53] 2025-02-24 20:08:51,540 [wrapper] cleanup supervisor_pilot 1849792 2244159
[2025-02-24 15:08:53] 2025-02-24 20:08:51,545 [wrapper] Test setup, not cleaning
[2025-02-24 15:08:53] 2025-02-24 20:08:51,634 [wrapper] apfmon messages muted
[2025-02-24 15:08:53] 2025-02-24 20:08:51,709 [wrapper] ==== wrapper stdout END ====
[2025-02-24 15:08:53] 2025-02-24 20:08:51,773 [wrapper] ==== wrapper stderr END ====
[2025-02-24 15:08:53]  *** Error codes and diagnostics ***
[2025-02-24 15:08:53]     "exeErrorCode": 0,
[2025-02-24 15:08:53]     "exeErrorDiag": "",
[2025-02-24 15:08:53]     "pilotErrorCode": 0,
[2025-02-24 15:08:53]     "pilotErrorDiag": "",
[2025-02-24 15:08:53]  *** Listing of results directory ***
[2025-02-24 15:08:53] total 687780
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas    491065 Feb 23 07:59 pilot3.tar.gz
[2025-02-24 15:08:53] -rwx------. 1 boincer umatlas     35865 Feb 23 08:16 runpilot2-wrapper.sh
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas      5118 Feb 23 08:16 queuedata.json
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas       100 Feb 23 14:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 15:08:53] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 23 14:00 run_atlas
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas       105 Feb 23 14:00 job.xml
[2025-02-24 15:08:53] -rw-r--r--. 2 boincer umatlas 342861106 Feb 23 14:00 EVNT.43078917._001305.pool.root.1
[2025-02-24 15:08:53] -rw-r--r--. 2 boincer umatlas     17569 Feb 23 14:00 start_atlas.sh
[2025-02-24 15:08:53] drwxrwx--x. 2 boincer umatlas      4096 Feb 23 14:00 shared
[2025-02-24 15:08:53] -rw-r--r--. 2 boincer umatlas    503559 Feb 23 14:00 input.tar.gz
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas         0 Feb 23 14:00 boinc_lockfile
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas      2547 Feb 23 14:00 pandaJob.out
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas       467 Feb 23 14:00 setup.sh.local
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas    987744 Feb 23 14:02 agis_schedconf.cvmfs.json
[2025-02-24 15:08:53] drwx------. 4 boincer umatlas      4096 Feb 23 14:02 pilot3
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas      6658 Feb 24 15:00 init_data.xml
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas 332384710 Feb 24 15:04 HITS.43078919._091408.pool.root.1
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas       533 Feb 24 15:04 boinc_task_state.xml
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas      1049 Feb 24 15:07 memory_monitor_summary.json
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas   1582569 Feb 24 15:07 agis_ddmendpoints.agis.ALL.json
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas   1651300 Feb 24 15:07 log.43078919._091408.job.log.tgz.1
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas        95 Feb 24 15:08 pilot_heartbeat.json
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas      7762 Feb 24 15:08 heartbeat.json
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas      8192 Feb 24 15:08 boinc_mmap_file
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas      4338 Feb 24 15:08 pilotlog.txt
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas        29 Feb 24 15:08 wrapper_checkpoint.txt
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas  10967586 Feb 24 15:08 log.43078919._091408.job.log.1
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas       357 Feb 24 15:08 output.list
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas       620 Feb 24 15:08 runtime_log
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas  12636160 Feb 24 15:08 result.tar.gz
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas       658 Feb 24 15:08 TVvMDmC1Q66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmBYvKDmPlQV1m.diag
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas     11406 Feb 24 15:08 runtime_log.err
[2025-02-24 15:08:53] -rw-r--r--. 1 boincer umatlas     22038 Feb 24 15:08 stderr.txt
[2025-02-24 15:08:53] HITS file was successfully produced:
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas 332384710 Feb 24 15:04 shared/HITS.pool.root.1
[2025-02-24 15:08:53]  *** Contents of shared directory: ***
[2025-02-24 15:08:53] total 672280
[2025-02-24 15:08:53] -rw-r--r--. 2 boincer umatlas 342861106 Feb 23 14:00 ATLAS.root_0
[2025-02-24 15:08:53] -rw-r--r--. 2 boincer umatlas     17569 Feb 23 14:00 start_atlas.sh
[2025-02-24 15:08:53] -rw-r--r--. 2 boincer umatlas    503559 Feb 23 14:00 input.tar.gz
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas 332384710 Feb 24 15:04 HITS.pool.root.1
[2025-02-24 15:08:53] -rw-------. 1 boincer umatlas  12636160 Feb 24 15:08 result.tar.gz
15:08:55 (2234956): run_atlas exited; CPU time 118850.133516
15:08:55 (2234956): called boinc_finish(0)

</stderr_txt>
]]>

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