Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-24 04:06:36 (3256): Detected: vboxwrapper 26206
2025-02-24 04:06:36 (3256): Detected: BOINC client v8.0.2
2025-02-24 04:06:37 (3256): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2025-02-24 04:06:37 (3256): Successfully copied 'init_data.xml' to the shared directory.
2025-02-24 04:06:37 (3256): Create VM. (boinc_6a65acbe559abfc1, slot#1)
2025-02-24 04:06:38 (3256): Setting Memory Size for VM. (5900MB)
2025-02-24 04:06:38 (3256): Setting CPU Count for VM. (3)
2025-02-24 04:06:38 (3256): Setting Chipset Options for VM.
2025-02-24 04:06:39 (3256): Setting Graphics Controller Options for VM.
2025-02-24 04:06:39 (3256): Setting Boot Options for VM.
2025-02-24 04:06:39 (3256): Setting Network Configuration for NAT.
2025-02-24 04:06:39 (3256): Enabling VM Network Access.
2025-02-24 04:06:40 (3256): Disabling USB Support for VM.
2025-02-24 04:06:40 (3256): Disabling COM Port Support for VM.
2025-02-24 04:06:40 (3256): Disabling LPT Port Support for VM.
2025-02-24 04:06:40 (3256): Disabling Audio Support for VM.
2025-02-24 04:06:41 (3256): Disabling Clipboard Support for VM.
2025-02-24 04:06:41 (3256): Disabling Drag and Drop Support for VM.
2025-02-24 04:06:41 (3256): Adding storage controller(s) to VM.
2025-02-24 04:06:42 (3256): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-24 04:06:44 (3256): Adding VirtualBox Guest Additions to VM.
2025-02-24 04:06:45 (3256): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-24 04:06:45 (3256): forwarding host port 55760 to guest port 80
2025-02-24 04:06:45 (3256): Enabling remote desktop for VM.
2025-02-24 04:06:46 (3256): Enabling shared directory for VM.
2025-02-24 04:06:46 (3256): Starting VM using VBoxManage interface. (boinc_6a65acbe559abfc1, slot#1)
2025-02-24 04:06:51 (3256): Successfully started VM. (PID = '10156')
2025-02-24 04:06:51 (3256): Reporting VM Process ID to BOINC.
2025-02-24 04:06:51 (3256): Guest Log: BIOS: VirtualBox 7.0.10
2025-02-24 04:06:51 (3256): Guest Log: CPUID EDX: 0x178bfbff
2025-02-24 04:06:51 (3256): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-24 04:06:51 (3256): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-24 04:06:51 (3256): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-24 04:06:51 (3256): Detected: Web Application Enabled (http://localhost:55760)
2025-02-24 04:06:51 (3256): Detected: Remote Desktop Enabled (localhost:55761)
2025-02-24 04:06:51 (3256): Preference change detected
2025-02-24 04:06:51 (3256): Setting CPU throttle for VM. (100%)
2025-02-24 04:06:51 (3256): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 04:06:53 (3256): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-24 04:06:53 (3256): Guest Log: BIOS: Booting from Hard Disk...
2025-02-24 04:06:55 (3256): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-24 04:06:55 (3256): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-24 04:06:55 (3256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-24 04:07:00 (3256): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-24 04:07:00 (3256): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-24 04:07:04 (3256): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-24 04:07:04 (3256): Guest Log: 00:00:00.000116 main     Log opened 2025-02-24T04:07:01.554843000Z
2025-02-24 04:07:04 (3256): Guest Log: 00:00:00.000191 main     OS Product: Linux
2025-02-24 04:07:04 (3256): Guest Log: 00:00:00.000217 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-24 04:07:04 (3256): Guest Log: 00:00:00.000239 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-24 04:07:04 (3256): Guest Log: 00:00:00.000261 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-24 04:07:04 (3256): Guest Log: 00:00:00.000262 main     Process ID: 1348
2025-02-24 04:07:04 (3256): Guest Log: 00:00:00.000262 main     Package type: LINUX_64BITS_GENERIC
2025-02-24 04:07:04 (3256): Guest Log: 00:00:00.000920 main     5.2.32 r132073 started. Verbose level = 0
2025-02-24 04:07:04 (3256): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-24 04:07:04 (3256): Guest Log: [INFO] Mounting shared directory
2025-02-24 04:07:04 (3256): Guest Log: [INFO] Checking for init_data.xml
2025-02-24 04:07:11 (3256): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-24 04:07:11 (3256): Guest Log: [INFO] Detected branch: prod
2025-02-24 04:07:11 (3256): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-24 04:07:11 (3256): Guest Log: Copying input files
2025-02-24 04:07:12 (3256): Guest Log: Copied input files into RunAtlas.
2025-02-24 04:07:12 (3256): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-02-24 04:07:14 (3256): Guest Log: 00:00:10.003465 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 908 041 000ns (GuestNow=1 740 366 433 649 061 000 ns GuestLast=1 740 370 021 557 102 000 ns fSetTimeLastLoop=true )
2025-02-24 04:07:20 (3256): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-24 04:07:20 (3256): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-24 04:07:20 (3256): Guest Log: 2.6.3.0 1627 0 29624 142996 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-02-24 04:07:20 (3256): Guest Log: copied the webapp to /var/www
2025-02-24 04:07:20 (3256): Guest Log: ATHENA_PROC_NUMBER=3
2025-02-24 04:07:20 (3256): Guest Log: ATHENA_CORE_NUMBER=3
2025-02-24 04:07:20 (3256): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-24 04:07:20 (3256): Guest Log:  *** Starting ATLAS job. (PandaID=6524817776 taskID=43205094) ***
2025-02-24 05:46:56 (3256): Status Report: Elapsed Time: '6000.000000'
2025-02-24 05:46:56 (3256): Status Report: CPU Time: '16393.984375'
2025-02-24 07:26:59 (3256): Status Report: Elapsed Time: '12000.000000'
2025-02-24 07:26:59 (3256): Status Report: CPU Time: '34395.000000'
2025-02-24 09:07:02 (3256): Status Report: Elapsed Time: '18000.000000'
2025-02-24 09:07:02 (3256): Status Report: CPU Time: '52379.250000'
2025-02-24 10:47:05 (3256): Status Report: Elapsed Time: '24000.000000'
2025-02-24 10:47:05 (3256): Status Report: CPU Time: '70374.796875'
2025-02-24 11:24:09 (3256): Guest Log:  *** Job finished ***
2025-02-24 11:24:09 (3256): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:23:54,881 | INFO     | [data] queue_monitor thread has finished
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:23:57,871 | INFO     | job.realtimelogging is not enabled
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:23:58,888 | INFO     | [payload] run_realtimelog thread has finished
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:00,679 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139637242009408)>', '<ExcThread(monitor, started 139636290610944)>']
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:00,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:00,925 | INFO     | [monitor] control thread has ended
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,686 | INFO     | all workflow threads have been joined
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,686 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,686 | INFO     | traces error code: 0
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,751 [wrapper] ==== pilot stdout END ====
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,755 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,758 [wrapper] pilotpid: 5939
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,761 [wrapper] Pilot exit status: 0
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,791 [wrapper] pandaids: 6524817776
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,813 [wrapper] cleanup supervisor_pilot  4670 5940
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,818 [wrapper] Test setup, not cleaning
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,824 [wrapper] apfmon messages muted
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,828 [wrapper] ==== wrapper stdout END ====
2025-02-24 11:24:09 (3256): Guest Log: 2025-02-24 10:24:05,831 [wrapper] ==== wrapper stderr END ====
2025-02-24 11:24:09 (3256): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 11:24:09 (3256): Guest Log:     "exeErrorCode": 0,
2025-02-24 11:24:09 (3256): Guest Log:     "exeErrorDiag": "",
2025-02-24 11:24:09 (3256): Guest Log:     "pilotErrorCode": 0,
2025-02-24 11:24:09 (3256): Guest Log:     "pilotErrorDiag": "",
2025-02-24 11:24:09 (3256): Guest Log:  *** Listing of results directory ***
2025-02-24 11:24:09 (3256): Guest Log: total 324444
2025-02-24 11:24:09 (3256): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 23 12:13 pilot3.tar.gz
2025-02-24 11:24:09 (3256): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 12:22 runpilot2-wrapper.sh
2025-02-24 11:24:09 (3256): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 12:22 queuedata.json
2025-02-24 11:24:09 (3256): Guest Log: -rwxr-xr-x. 1 atlas atlas      9311 Feb 24 03:07 init_data.xml
2025-02-24 11:24:09 (3256): Guest Log: -rwxr-xr-x. 1 atlas atlas    503551 Feb 24 03:07 input.tar.gz
2025-02-24 11:24:09 (3256): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 24 03:07 start_atlas.sh
2025-02-24 11:24:09 (3256): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 24 03:07 EVNT.43092757._001960.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 11:24:09 (3256): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Feb 24 03:07 pandaJob.out
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas       459 Feb 24 03:07 setup.sh.local
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas    987720 Feb 24 03:08 agis_schedconf.cvmfs.json
2025-02-24 11:24:09 (3256): Guest Log: drwx------. 4 atlas atlas      4096 Feb 24 03:08 pilot3
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas 321876579 Feb 24 10:23 HITS.43205094._039311.pool.root.1
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 10:23 pilot_heartbeat.json
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas      1029 Feb 24 10:23 memory_monitor_summary.json
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 24 10:23 agis_ddmendpoints.agis.ALL.json
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas    436690 Feb 24 10:23 log.43205094._039311.job.log.tgz.1
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas      7741 Feb 24 10:23 heartbeat.json
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas      4470 Feb 24 10:24 pilotlog.txt
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas   2868548 Feb 24 10:24 log.43205094._039311.job.log.1
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 10:24 output.list
2025-02-24 11:24:09 (3256): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 10:24 runtime_log
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas   3328000 Feb 24 10:24 result.tar.gz
2025-02-24 11:24:09 (3256): Guest Log: -rw-r--r--. 1 atlas atlas     11296 Feb 24 10:24 runtime_log.err
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas       658 Feb 24 10:24 locNDmxAQ66n9Rq4apOajLDm4fhM0noT9bVoFjIUDmaveKDmcYXfWo.diag
2025-02-24 11:24:09 (3256): Guest Log: Looking for outputfile HITS.43205094._039311.pool.root.1
2025-02-24 11:24:09 (3256): Guest Log: HITS file was successfully produced
2025-02-24 11:24:09 (3256): Guest Log: -rw-------. 1 atlas atlas 321876579 Feb 24 10:23 /home/atlas/RunAtlas/HITS.43205094._039311.pool.root.1
2025-02-24 11:24:10 (3256): Guest Log: Successfully finished the ATLAS job!
2025-02-24 11:24:10 (3256): Guest Log: Copying the results back to the shared directory!
2025-02-24 11:24:10 (3256): Guest Log:  *** Contents of shared directory: ***
2025-02-24 11:24:10 (3256): Guest Log: total 654183
2025-02-24 11:24:10 (3256): Guest Log: -rwxrwxrwx. 1 root root 344144897 Feb 24 03:06 ATLAS.root_0
2025-02-24 11:24:10 (3256): Guest Log: -rwxrwxrwx. 1 root root 321876579 Feb 24 10:24 HITS.pool.root.1
2025-02-24 11:24:10 (3256): Guest Log: -rwxrwxrwx. 1 root root      9311 Feb 24 03:06 init_data.xml
2025-02-24 11:24:10 (3256): Guest Log: -rwxrwxrwx. 1 root root    503551 Feb 23 18:05 input.tar.gz
2025-02-24 11:24:10 (3256): Guest Log: -rwxrwxrwx. 1 root root   3328000 Feb 24 10:24 result.tar.gz
2025-02-24 11:24:10 (3256): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 18:05 start_atlas.sh
2025-02-24 11:24:10 (3256): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 11:24:10 (3256): VM Completion File Detected.
2025-02-24 11:24:10 (3256): Powering off VM.
2025-02-24 11:24:11 (3256): Successfully stopped VM.
2025-02-24 11:24:11 (3256): Deregistering VM. (boinc_6a65acbe559abfc1, slot#1)
2025-02-24 11:24:11 (3256): Removing network bandwidth throttle group from VM.
2025-02-24 11:24:11 (3256): Removing VM from VirtualBox.
11:24:16 (3256): called boinc_finish(0)

</stderr_txt>
]]>

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