Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:21:41 (539070): wrapper (7.7.26015): starting
17:21:41 (539070): wrapper: running run_atlas (--nthreads 9)
[2025-02-23 17:21:41] Arguments: --nthreads 9
[2025-02-23 17:21:41] Threads: 9
[2025-02-23 17:21:41] Checking for CVMFS
[2025-02-23 17:21:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-23 17:21:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-23 17:21:41] Running cvmfs_config stat atlas.cern.ch
[2025-02-23 17:21:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-23 17:21:42] 2.11.5.0 2130797 27976 252708 142990 0 63 15376756 37641217 14311 130560 0 1468297 98.420 5512594 34343 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-23 17:21:42] CVMFS is ok
[2025-02-23 17:21:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 17:21:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 17:21:42] Further information can be found at the LHC@home message board.
[2025-02-23 17:21:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 17:21:42] Checking for apptainer binary...
[2025-02-23 17:21:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-23 17:21:42] Running /usr/bin/apptainer --version
[2025-02-23 17:21:42] apptainer version 1.3.6-1.el9
[2025-02-23 17:21:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 17:21:42] c6-1-26-1.aglt2.org
[2025-02-23 17:21:42] apptainer works
[2025-02-23 17:21:42] Set ATHENA_PROC_NUMBER=9
[2025-02-23 17:21:42] Set ATHENA_CORE_NUMBER=9
[2025-02-23 17:21:42] Starting ATLAS job with PandaID=6523825382
[2025-02-23 17:21:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 23:50:28]  *** The last 200 lines of the pilot log: ***
[2025-02-23 23:50:28] 2025-02-24 04:50:07,227 | INFO     | chi2: 5.396444426714016
[2025-02-23 23:50:28] 2025-02-24 04:50:07,227 | INFO     | model: linear, x: [1740349429.0, 1740349490.0, 1740349551.0, 1740349612.0, 1740349673.0, 1740349734.0, 1740349795.0, 1740349856.0, 1740349917.0, 1740349978.0, 1740
[2025-02-23 23:50:28] 2025-02-24 04:50:07,228 | INFO     | sum of square deviations: 16351890473.536007
[2025-02-23 23:50:28] 2025-02-24 04:50:07,230 | INFO     | sum of deviations: 148285043495.552
[2025-02-23 23:50:28] 2025-02-24 04:50:07,230 | INFO     | mean x: 1740360836.648
[2025-02-23 23:50:28] 2025-02-24 04:50:07,230 | INFO     | mean y: 2421111.936
[2025-02-23 23:50:28] 2025-02-24 04:50:07,231 | INFO     | -- intersect: -15779820261.19239
[2025-02-23 23:50:28] 2025-02-24 04:50:07,231 | INFO     | intersect: -15779820261.19239
[2025-02-23 23:50:28] 2025-02-24 04:50:07,231 | INFO     | chi2: 4.542422753288605
[2025-02-23 23:50:28] 2025-02-24 04:50:07,231 | INFO     | current chi2=4.542422753288605 (change=15.825636398621059 %)
[2025-02-23 23:50:28] 2025-02-24 04:50:07,231 | INFO     | right removable region: 374
[2025-02-23 23:50:28] 2025-02-24 04:50:07,232 | INFO     | model: linear, x: [1740349734.0, 1740349795.0, 1740349856.0, 1740349917.0, 1740349978.0, 1740350039.0, 1740350101.0, 1740350162.0, 1740350223.0, 1740350284.0, 1740
[2025-02-23 23:50:28] 2025-02-24 04:50:07,232 | INFO     | sum of square deviations: 16351787382.933266
[2025-02-23 23:50:28] 2025-02-24 04:50:07,234 | INFO     | sum of deviations: 32716237663.973263
[2025-02-23 23:50:28] 2025-02-24 04:50:07,235 | INFO     | mean x: 1740361141.6533334
[2025-02-23 23:50:28] 2025-02-24 04:50:07,235 | INFO     | mean y: 2436139.6613333332
[2025-02-23 23:50:28] 2025-02-24 04:50:07,235 | INFO     | -- intersect: -3479633887.1848974
[2025-02-23 23:50:28] 2025-02-24 04:50:07,235 | INFO     | intersect: -3479633887.1848974
[2025-02-23 23:50:28] 2025-02-24 04:50:07,235 | INFO     | chi2: 2.9971301888859303
[2025-02-23 23:50:28] 2025-02-24 04:50:07,235 | INFO     | current chi2=2.9971301888859303 (change=44.46102003665157 %)
[2025-02-23 23:50:28] 2025-02-24 04:50:07,236 | INFO     | model: linear, x: [1740350039.0, 1740350101.0, 1740350162.0, 1740350223.0, 1740350284.0, 1740350344.0, 1740350405.0, 1740350466.0, 1740350527.0, 1740350588.0, 1740
[2025-02-23 23:50:28] 2025-02-24 04:50:07,236 | INFO     | sum of square deviations: 15706314508.270216
[2025-02-23 23:50:28] 2025-02-24 04:50:07,239 | INFO     | sum of deviations: -27058099108.324318
[2025-02-23 23:50:28] 2025-02-24 04:50:07,239 | INFO     | mean x: 1740361294.162162
[2025-02-23 23:50:28] 2025-02-24 04:50:07,239 | INFO     | mean y: 2450262.7054054053
[2025-02-23 23:50:28] 2025-02-24 04:50:07,239 | INFO     | -- intersect: 3000662755.9631643
[2025-02-23 23:50:28] 2025-02-24 04:50:07,239 | INFO     | intersect: 3000662755.9631643
[2025-02-23 23:50:28] 2025-02-24 04:50:07,239 | INFO     | chi2: 2.0242303619758824
[2025-02-23 23:50:28] 2025-02-24 04:50:07,240 | INFO     | current chi2=2.0242303619758824 (change=32.461046587758894 %)
[2025-02-23 23:50:28] 2025-02-24 04:50:07,240 | INFO     | model: linear, x: [1740350344.0, 1740350405.0, 1740350466.0, 1740350527.0, 1740350588.0, 1740350649.0, 1740350710.0, 1740350771.0, 1740350832.0, 1740350894.0, 1740
[2025-02-23 23:50:28] 2025-02-24 04:50:07,240 | INFO     | sum of square deviations: 15078141295.873991
[2025-02-23 23:50:28] 2025-02-24 04:50:07,243 | INFO     | sum of deviations: -71479370364.64394
[2025-02-23 23:50:28] 2025-02-24 04:50:07,243 | INFO     | mean x: 1740361446.660274
[2025-02-23 23:50:28] 2025-02-24 04:50:07,243 | INFO     | mean y: 2461024.4383561644
[2025-02-23 23:50:28] 2025-02-24 04:50:07,243 | INFO     | -- intersect: 8252810850.263258
[2025-02-23 23:50:28] 2025-02-24 04:50:07,243 | INFO     | intersect: 8252810850.263258
[2025-02-23 23:50:28] 2025-02-24 04:50:07,243 | INFO     | chi2: 1.4242158075501328
[2025-02-23 23:50:28] 2025-02-24 04:50:07,243 | INFO     | current chi2=1.4242158075501328 (change=29.64161420047401 %)
[2025-02-23 23:50:28] 2025-02-24 04:50:07,244 | INFO     | model: linear, x: [1740350649.0, 1740350710.0, 1740350771.0, 1740350832.0, 1740350894.0, 1740350954.0, 1740351016.0, 1740351077.0, 1740351137.0, 1740351198.0, 1740
[2025-02-23 23:50:28] 2025-02-24 04:50:07,244 | INFO     | sum of square deviations: 14466856328.66388
[2025-02-23 23:50:28] 2025-02-24 04:50:07,246 | INFO     | sum of deviations: -83128120425.48053
[2025-02-23 23:50:28] 2025-02-24 04:50:07,247 | INFO     | mean x: 1740361599.1694446
[2025-02-23 23:50:28] 2025-02-24 04:50:07,247 | INFO     | mean y: 2463923.6472222223
[2025-02-23 23:50:28] 2025-02-24 04:50:07,247 | INFO     | -- intersect: 10002769816.848906
[2025-02-23 23:50:28] 2025-02-24 04:50:07,247 | INFO     | intersect: 10002769816.848906
[2025-02-23 23:50:28] 2025-02-24 04:50:07,247 | INFO     | chi2: 1.364067528858188
[2025-02-23 23:50:28] 2025-02-24 04:50:07,247 | INFO     | current chi2=1.364067528858188 (change=4.223255940081783 %)
[2025-02-23 23:50:28] 2025-02-24 04:50:07,247 | INFO     | left removable region: 40
[2025-02-23 23:50:28] 2025-02-24 04:50:07,248 | INFO     | model: linear, x: [1740351869.0, 1740351931.0, 1740351991.0, 1740352053.0, 1740352115.0, 1740352176.0, 1740352235.0, 1740352297.0, 1740352358.0, 1740352419.0, 1740
[2025-02-23 23:50:28] 2025-02-24 04:50:07,248 | INFO     | sum of square deviations: 11553069898.958029
[2025-02-23 23:50:28] 2025-02-24 04:50:07,250 | INFO     | sum of deviations: 2145535709.820356
[2025-02-23 23:50:28] 2025-02-24 04:50:07,250 | INFO     | mean x: 1740362026.197605
[2025-02-23 23:50:28] 2025-02-24 04:50:07,250 | INFO     | mean y: 2454878.275449102
[2025-02-23 23:50:28] 2025-02-24 04:50:07,250 | INFO     | -- intersect: -320750028.1156255
[2025-02-23 23:50:28] 2025-02-24 04:50:07,250 | INFO     | intersect: -320750028.1156255
[2025-02-23 23:50:28] 2025-02-24 04:50:07,251 | INFO     | chi2: 0.22482884562986283
[2025-02-23 23:50:28] 2025-02-24 04:50:07,251 | INFO     | -- intersect: -320750028.1156255
[2025-02-23 23:50:28] 2025-02-24 04:50:07,251 | INFO     | current memory leak: 0.19 B/s (using 334 data points, chi2=0.22)
[2025-02-23 23:50:28] 2025-02-24 04:50:07,252 | INFO     | ..............................
[2025-02-23 23:50:28] 2025-02-24 04:50:07,252 | INFO     | . Timing measurements:
[2025-02-23 23:50:28] 2025-02-24 04:50:07,252 | INFO     | . get job = 0 s
[2025-02-23 23:50:28] 2025-02-24 04:50:07,252 | INFO     | . initial setup = 3 s
[2025-02-23 23:50:28] 2025-02-24 04:50:07,252 | INFO     | . payload setup = 26 s
[2025-02-23 23:50:28] 2025-02-24 04:50:07,252 | INFO     | . stage-in = 0 s
[2025-02-23 23:50:28] 2025-02-24 04:50:07,252 | INFO     | . payload execution = 23171 s
[2025-02-23 23:50:28] 2025-02-24 04:50:07,252 | INFO     | . stage-out = 2 s
[2025-02-23 23:50:28] 2025-02-24 04:50:07,252 | INFO     | . log creation = 0 s
[2025-02-23 23:50:28] 2025-02-24 04:50:07,252 | INFO     | ..............................
[2025-02-23 23:50:28] 2025-02-24 04:50:07,330 | INFO     | 
[2025-02-23 23:50:28] 2025-02-24 04:50:07,330 | INFO     | job summary report
[2025-02-23 23:50:28] 2025-02-24 04:50:07,330 | INFO     | --------------------------------------------------
[2025-02-23 23:50:28] 2025-02-24 04:50:07,330 | INFO     | PanDA job id: 6523825382
[2025-02-23 23:50:28] 2025-02-24 04:50:07,330 | INFO     | task id: 43205094
[2025-02-23 23:50:28] 2025-02-24 04:50:07,330 | INFO     | errors: (none)
[2025-02-23 23:50:28] 2025-02-24 04:50:07,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 23:50:28] 2025-02-24 04:50:07,330 | INFO     | pilot state: finished 
[2025-02-23 23:50:28] 2025-02-24 04:50:07,330 | INFO     | transexitcode: 0
[2025-02-23 23:50:28] 2025-02-24 04:50:07,330 | INFO     | exeerrorcode: 0
[2025-02-23 23:50:28] 2025-02-24 04:50:07,330 | INFO     | exeerrordiag: 
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | exitcode: 0
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | exitmsg: OK
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | cpuconsumptiontime: 87148 s
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | nevents: 400
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | neventsw: 0
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | pid: 555722
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | pgrp: 555722
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | corecount: 9
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | event service: False
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | sizes: {0: 2383138, 1: 2383138, 2: 2383365, 3: 2383365, 14: 2383393, 25: 2383421, 27: 2383783, 36: 2383811, 23201: 2418470, 23205: 2427467, 23214: 2427581}
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | --------------------------------------------------
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | 
[2025-02-23 23:50:28] 2025-02-24 04:50:07,331 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-23 23:50:28] 2025-02-24 04:50:07,353 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,353 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,353 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,353 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 23:50:28] 2025-02-24 04:50:07,354 | INFO     | job 6523825382 has completed (purged errors)
[2025-02-23 23:50:28] 2025-02-24 04:50:07,355 | INFO     | overall cleanup function is called
[2025-02-23 23:50:28] 2025-02-24 04:50:08,365 | INFO     | --- collectZombieJob: --- 10, [555722]
[2025-02-23 23:50:28] 2025-02-24 04:50:08,365 | INFO     | zombie collector waiting for pid 555722
[2025-02-23 23:50:28] 2025-02-24 04:50:08,365 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 23:50:28] 2025-02-24 04:50:08,365 | INFO     | collected zombie processes
[2025-02-23 23:50:28] 2025-02-24 04:50:08,365 | INFO     | will attempt to kill all subprocesses of pid=555722
[2025-02-23 23:50:28] 2025-02-24 04:50:08,557 | INFO     | process IDs to be killed: [555722] (in reverse order)
[2025-02-23 23:50:28] 2025-02-24 04:50:08,682 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 23:50:28] 2025-02-24 04:50:08,682 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 23:50:28] 2025-02-24 04:50:08,693 | INFO     | did not find any defunct processes belonging to 555722
[2025-02-23 23:50:28] 2025-02-24 04:50:08,704 | INFO     | did not find any defunct processes belonging to 555722
[2025-02-23 23:50:28] 2025-02-24 04:50:08,705 | INFO     | ready for new job
[2025-02-23 23:50:28] 2025-02-24 04:50:08,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 23:50:28] 2025-02-24 04:50:08,707 | INFO     | **************************************
[2025-02-23 23:50:28] 2025-02-24 04:50:08,707 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 23:50:28] 2025-02-24 04:50:08,708 | INFO     | **************************************
[2025-02-23 23:50:28] 2025-02-24 04:50:08,708 | INFO     | 
[2025-02-23 23:50:28] 2025-02-24 04:50:08,726 | INFO     | architecture information:
[2025-02-23 23:50:28] 2025-02-24 04:50:08,731 | INFO     | executing command: cat /etc/os-release
[2025-02-23 23:50:28] 2025-02-24 04:50:08,748 | INFO     | cat /etc/os-release:
[2025-02-23 23:50:28] NAME="CentOS Linux"
[2025-02-23 23:50:28] VERSION="7 (Core)"
[2025-02-23 23:50:28] ID="centos"
[2025-02-23 23:50:28] ID_LIKE="rhel fedora"
[2025-02-23 23:50:28] VERSION_ID="7"
[2025-02-23 23:50:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 23:50:28] ANSI_COLOR="0;31"
[2025-02-23 23:50:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 23:50:28] HOME_URL="https://www.centos.org/"
[2025-02-23 23:50:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 23:50:28] 
[2025-02-23 23:50:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 23:50:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 23:50:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 23:50:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 23:50:28] 
[2025-02-23 23:50:28] 2025-02-24 04:50:08,748 | INFO     | **************************************
[2025-02-23 23:50:28] 2025-02-24 04:50:09,261 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-23 23:50:28] 2025-02-24 04:50:09,312 | INFO     | sufficient remaining disk space (74073505792 B)
[2025-02-23 23:50:28] 2025-02-24 04:50:09,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 23:50:28] 2025-02-24 04:50:09,313 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 23:50:28] 2025-02-24 04:50:09,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 23:50:28] 2025-02-24 04:50:09,313 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-23 23:50:28] 2025-02-24 04:50:09,314 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 23:50:28] 2025-02-24 04:50:09,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 23:50:28] 2025-02-24 04:50:09,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 23:50:28] 2025-02-24 04:50:09,316 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 23:50:28] 2025-02-24 04:50:09,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 23:50:28] 2025-02-24 04:50:09,318 | INFO     | aborting loop
[2025-02-23 23:50:28] 2025-02-24 04:50:09,428 | INFO     | all payload control threads have been joined
[2025-02-23 23:50:28] 2025-02-24 04:50:09,621 | INFO     | all data control threads have been joined
[2025-02-23 23:50:28] 2025-02-24 04:50:10,056 | INFO     | all job control threads have been joined
[2025-02-23 23:50:28] 2025-02-24 04:50:10,319 | INFO     | [job] retrieve thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:10,322 | INFO     | [job] queue monitor thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:10,324 | INFO     | [job] job monitor thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:10,335 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:10,434 | INFO     | [payload] control thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:10,627 | INFO     | [data] control thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:10,716 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 23:50:28] 2025-02-24 04:50:11,008 | INFO     | [job] validate thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:11,038 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:11,062 | INFO     | [job] control thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:11,151 | INFO     | [payload] failed_post thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:11,448 | INFO     | [payload] validate_post thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:11,478 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:11,530 | INFO     | [data] copytool_in thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:12,724 | INFO     | [data] copytool_out thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:13,321 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:20,018 | INFO     | job.realtimelogging is not enabled
[2025-02-23 23:50:28] 2025-02-24 04:50:21,024 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 23:50:28] 2025-02-24 04:50:22,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140282773235520)>', '<ExcThread(monitor, started 140282504910592)>']
[2025-02-23 23:50:28] 2025-02-24 04:50:23,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 23:50:28] 2025-02-24 04:50:23,406 | INFO     | [monitor] control thread has ended
[2025-02-23 23:50:28] 2025-02-24 04:50:27,658 | INFO     | all workflow threads have been joined
[2025-02-23 23:50:28] 2025-02-24 04:50:27,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 23:50:28] 2025-02-24 04:50:27,659 | INFO     | traces error code: 0
[2025-02-23 23:50:28] 2025-02-24 04:50:27,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 23:50:28] 2025-02-24 04:50:27,949 [wrapper] ==== pilot stdout END ====
[2025-02-23 23:50:28] 2025-02-24 04:50:27,951 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 23:50:28] 2025-02-24 04:50:27,955 [wrapper] pilotpid: 543069
[2025-02-23 23:50:28] 2025-02-24 04:50:27,974 [wrapper] Pilot exit status: 0
[2025-02-23 23:50:28] 2025-02-24 04:50:28,114 [wrapper] pandaids: 6523825382
[2025-02-23 23:50:28] 2025-02-24 04:50:28,435 [wrapper] cleanup supervisor_pilot 1645513 543070
[2025-02-23 23:50:28] 2025-02-24 04:50:28,439 [wrapper] Test setup, not cleaning
[2025-02-23 23:50:28] 2025-02-24 04:50:28,468 [wrapper] apfmon messages muted
[2025-02-23 23:50:28] 2025-02-24 04:50:28,486 [wrapper] ==== wrapper stdout END ====
[2025-02-23 23:50:28] 2025-02-24 04:50:28,500 [wrapper] ==== wrapper stderr END ====
[2025-02-23 23:50:28]  *** Error codes and diagnostics ***
[2025-02-23 23:50:28]     "exeErrorCode": 0,
[2025-02-23 23:50:28]     "exeErrorDiag": "",
[2025-02-23 23:50:28]     "pilotErrorCode": 0,
[2025-02-23 23:50:28]     "pilotErrorDiag": "",
[2025-02-23 23:50:28]  *** Listing of results directory ***
[2025-02-23 23:50:28] total 662388
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas    491065 Feb 23 00:42 pilot3.tar.gz
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas      5118 Feb 23 01:05 queuedata.json
[2025-02-23 23:50:28] -rwx------. 1 boincer umatlas     35865 Feb 23 01:07 runpilot2-wrapper.sh
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas       100 Feb 23 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 23:50:28] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 23 17:21 run_atlas
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas       105 Feb 23 17:21 job.xml
[2025-02-23 23:50:28] -rw-r--r--. 2 boincer umatlas 343077984 Feb 23 17:21 EVNT.43092757._001942.pool.root.1
[2025-02-23 23:50:28] -rw-r--r--. 2 boincer umatlas    503562 Feb 23 17:21 input.tar.gz
[2025-02-23 23:50:28] -rw-r--r--. 2 boincer umatlas     17569 Feb 23 17:21 start_atlas.sh
[2025-02-23 23:50:28] drwxrwx--x. 2 boincer umatlas      4096 Feb 23 17:21 shared
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas         0 Feb 23 17:21 boinc_lockfile
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas      2547 Feb 23 17:21 pandaJob.out
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas       467 Feb 23 17:21 setup.sh.local
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas    987744 Feb 23 17:22 agis_schedconf.cvmfs.json
[2025-02-23 23:50:28] drwx------. 4 boincer umatlas      4096 Feb 23 17:22 pilot3
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas 325433220 Feb 23 23:49 HITS.43205094._038356.pool.root.1
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas       532 Feb 23 23:49 boinc_task_state.xml
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas        95 Feb 23 23:49 pilot_heartbeat.json
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas      6841 Feb 23 23:49 init_data.xml
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas      1053 Feb 23 23:49 memory_monitor_summary.json
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas   1582569 Feb 23 23:49 agis_ddmendpoints.agis.ALL.json
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas    531017 Feb 23 23:49 log.43205094._038356.job.log.tgz.1
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas      7758 Feb 23 23:50 heartbeat.json
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas      8192 Feb 23 23:50 boinc_mmap_file
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas        28 Feb 23 23:50 wrapper_checkpoint.txt
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas      4410 Feb 23 23:50 pilotlog.txt
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas   2450728 Feb 23 23:50 log.43205094._038356.job.log.1
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas       357 Feb 23 23:50 output.list
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas       620 Feb 23 23:50 runtime_log
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas   3000320 Feb 23 23:50 result.tar.gz
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas     11424 Feb 23 23:50 runtime_log.err
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas       662 Feb 23 23:50 ibJMDmqKK66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm16uKDmgnWNLo.diag
[2025-02-23 23:50:28] -rw-r--r--. 1 boincer umatlas     21660 Feb 23 23:50 stderr.txt
[2025-02-23 23:50:28] HITS file was successfully produced:
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas 325433220 Feb 23 23:49 shared/HITS.pool.root.1
[2025-02-23 23:50:28]  *** Contents of shared directory: ***
[2025-02-23 23:50:28] total 656300
[2025-02-23 23:50:28] -rw-r--r--. 2 boincer umatlas 343077984 Feb 23 17:21 ATLAS.root_0
[2025-02-23 23:50:28] -rw-r--r--. 2 boincer umatlas    503562 Feb 23 17:21 input.tar.gz
[2025-02-23 23:50:28] -rw-r--r--. 2 boincer umatlas     17569 Feb 23 17:21 start_atlas.sh
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas 325433220 Feb 23 23:49 HITS.pool.root.1
[2025-02-23 23:50:28] -rw-------. 1 boincer umatlas   3000320 Feb 23 23:50 result.tar.gz
23:50:29 (539070): run_atlas exited; CPU time 87079.219532
23:50:29 (539070): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN