Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-24 03:12:51 (11104): Detected: vboxwrapper 26206
2025-02-24 03:12:51 (11104): Detected: BOINC client v7.16.11
2025-02-24 03:12:51 (11104): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-02-24 03:12:52 (11104): Successfully copied 'init_data.xml' to the shared directory.
2025-02-24 03:12:52 (11104): Create VM. (boinc_f0fd54cef421ef87, slot#2)
2025-02-24 03:12:53 (11104): Setting Memory Size for VM. (4600MB)
2025-02-24 03:12:53 (11104): Setting CPU Count for VM. (6)
2025-02-24 03:12:53 (11104): Setting Chipset Options for VM.
2025-02-24 03:12:54 (11104): Setting Graphics Controller Options for VM.
2025-02-24 03:12:54 (11104): Setting Boot Options for VM.
2025-02-24 03:12:54 (11104): Setting Network Configuration for NAT.
2025-02-24 03:12:54 (11104): Enabling VM Network Access.
2025-02-24 03:12:55 (11104): Disabling USB Support for VM.
2025-02-24 03:12:55 (11104): Disabling COM Port Support for VM.
2025-02-24 03:12:55 (11104): Disabling LPT Port Support for VM.
2025-02-24 03:12:55 (11104): Disabling Audio Support for VM.
2025-02-24 03:12:56 (11104): Disabling Clipboard Support for VM.
2025-02-24 03:12:56 (11104): Disabling Drag and Drop Support for VM.
2025-02-24 03:12:56 (11104): Adding storage controller(s) to VM.
2025-02-24 03:12:56 (11104): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-24 03:12:58 (11104): Adding VirtualBox Guest Additions to VM.
2025-02-24 03:12:58 (11104): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-24 03:12:58 (11104): forwarding host port 60928 to guest port 80
2025-02-24 03:12:58 (11104): Enabling remote desktop for VM.
2025-02-24 03:12:59 (11104): Required extension pack not installed, remote desktop not enabled.
2025-02-24 03:12:59 (11104): Enabling shared directory for VM.
2025-02-24 03:12:59 (11104): Starting VM using VBoxManage interface. (boinc_f0fd54cef421ef87, slot#2)
2025-02-24 03:13:03 (11104): Successfully started VM. (PID = '7852')
2025-02-24 03:13:03 (11104): Reporting VM Process ID to BOINC.
2025-02-24 03:13:03 (11104): Guest Log: BIOS: VirtualBox 6.1.12
2025-02-24 03:13:03 (11104): Guest Log: CPUID EDX: 0x178bfbff
2025-02-24 03:13:03 (11104): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-24 03:13:03 (11104): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-24 03:13:03 (11104): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-24 03:13:03 (11104): Detected: Web Application Enabled (http://localhost:60928)
2025-02-24 03:13:03 (11104): Preference change detected
2025-02-24 03:13:03 (11104): Setting CPU throttle for VM. (100%)
2025-02-24 03:13:03 (11104): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 03:13:05 (11104): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-24 03:13:05 (11104): Guest Log: BIOS: Booting from Hard Disk...
2025-02-24 03:13:07 (11104): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-24 03:13:07 (11104): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-24 03:13:07 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-24 03:13:12 (11104): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-24 03:13:12 (11104): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-24 03:13:16 (11104): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-24 03:13:16 (11104): Guest Log: 00:00:00.000094 main     Log opened 2025-02-24T03:13:14.348171000Z
2025-02-24 03:13:16 (11104): Guest Log: 00:00:00.000169 main     OS Product: Linux
2025-02-24 03:13:16 (11104): Guest Log: 00:00:00.000190 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-24 03:13:16 (11104): Guest Log: 00:00:00.000207 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-24 03:13:16 (11104): Guest Log: 00:00:00.000224 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-24 03:13:16 (11104): Guest Log: 00:00:00.000224 main     Process ID: 1329
2025-02-24 03:13:16 (11104): Guest Log: 00:00:00.000225 main     Package type: LINUX_64BITS_GENERIC
2025-02-24 03:13:16 (11104): Guest Log: 00:00:00.000745 main     5.2.32 r132073 started. Verbose level = 0
2025-02-24 03:13:16 (11104): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-24 03:13:16 (11104): Guest Log: [INFO] Mounting shared directory
2025-02-24 03:13:16 (11104): Guest Log: [INFO] Checking for init_data.xml
2025-02-24 03:13:22 (11104): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-24 03:13:22 (11104): Guest Log: [INFO] Detected branch: prod
2025-02-24 03:13:22 (11104): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-24 03:13:22 (11104): Guest Log: Copying input files
2025-02-24 03:13:24 (11104): Guest Log: Copied input files into RunAtlas.
2025-02-24 03:13:24 (11104): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-24 03:13:24 (11104): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-24 03:13:24 (11104): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-24 03:13:24 (11104): Guest Log: Further information can be found at the LHC@home message board.
2025-02-24 03:13:26 (11104): Guest Log: 00:00:10.020774 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 431 764 000ns (GuestNow=1 740 388 405 781 791 000 ns GuestLast=1 740 366 794 350 027 000 ns fSetTimeLastLoop=true )
2025-02-24 03:13:32 (11104): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-24 03:13:32 (11104): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-24 03:13:32 (11104): Guest Log: 2.6.3.0 1611 0 30184 143005 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-24 03:13:32 (11104): Guest Log: copied the webapp to /var/www
2025-02-24 03:13:32 (11104): Guest Log: ATHENA_PROC_NUMBER=6
2025-02-24 03:13:32 (11104): Guest Log: ATHENA_CORE_NUMBER=6
2025-02-24 03:13:32 (11104): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-24 03:13:32 (11104): Guest Log:  *** Starting ATLAS job. (PandaID=6523641809 taskID=43205094) ***
2025-02-24 04:53:15 (11104): Status Report: Elapsed Time: '6000.000000'
2025-02-24 04:53:15 (11104): Status Report: CPU Time: '30379.625000'
2025-02-24 06:17:38 (11104): Guest Log:  *** Job finished ***
2025-02-24 06:17:38 (11104): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:22,946 | INFO     | [data] copytool_out thread has finished
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:23,258 | INFO     | [data] copytool_in thread has finished
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:27,075 | INFO     | [data] queue_monitor thread has finished
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:27,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139859303532352)>', '<ExcThread(monitor, started 139858462881536)>']
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:27,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:27,852 | INFO     | [monitor] control thread has ended
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,213 | INFO     | all workflow threads have been joined
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,213 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,214 | INFO     | traces error code: 0
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,277 [wrapper] ==== pilot stdout END ====
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,281 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,284 [wrapper] pilotpid: 5935
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,288 [wrapper] Pilot exit status: 0
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,378 [wrapper] pandaids: 6523641809
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,404 [wrapper] cleanup supervisor_pilot 12135 5936
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,408 [wrapper] Test setup, not cleaning
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,416 [wrapper] apfmon messages muted
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,420 [wrapper] ==== wrapper stdout END ====
2025-02-24 06:17:38 (11104): Guest Log: 2025-02-24 12:17:32,425 [wrapper] ==== wrapper stderr END ====
2025-02-24 06:17:38 (11104): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 06:17:38 (11104): Guest Log:     "exeErrorCode": 0,
2025-02-24 06:17:38 (11104): Guest Log:     "exeErrorDiag": "",
2025-02-24 06:17:38 (11104): Guest Log:     "pilotErrorCode": 0,
2025-02-24 06:17:38 (11104): Guest Log:     "pilotErrorDiag": "",
2025-02-24 06:17:38 (11104): Guest Log:  *** Listing of results directory ***
2025-02-24 06:17:38 (11104): Guest Log: total 324052
2025-02-24 06:17:38 (11104): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 23 02:55 pilot3.tar.gz
2025-02-24 06:17:38 (11104): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 03:02 queuedata.json
2025-02-24 06:17:38 (11104): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 03:03 runpilot2-wrapper.sh
2025-02-24 06:17:38 (11104): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 24 09:13 start_atlas.sh
2025-02-24 06:17:38 (11104): Guest Log: -rwxr-xr-x. 1 atlas atlas    503562 Feb 24 09:13 input.tar.gz
2025-02-24 06:17:38 (11104): Guest Log: -rwxr-xr-x. 1 atlas atlas      8884 Feb 24 09:13 init_data.xml
2025-02-24 06:17:38 (11104): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 24 09:13 EVNT.43092757._001894.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 06:17:38 (11104): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Feb 24 09:13 pandaJob.out
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas       424 Feb 24 09:13 setup.sh.local
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas    987741 Feb 24 09:14 agis_schedconf.cvmfs.json
2025-02-24 06:17:38 (11104): Guest Log: drwx------. 4 atlas atlas      4096 Feb 24 09:14 pilot3
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas 325495474 Feb 24 12:16 HITS.43205094._037764.pool.root.1
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 12:16 pilot_heartbeat.json
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas      1037 Feb 24 12:16 memory_monitor_summary.json
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 24 12:17 agis_ddmendpoints.agis.ALL.json
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas    339077 Feb 24 12:17 log.43205094._037764.job.log.tgz.1
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas      7708 Feb 24 12:17 heartbeat.json
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 24 12:17 pilotlog.txt
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas    957846 Feb 24 12:17 log.43205094._037764.job.log.1
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 12:17 output.list
2025-02-24 06:17:38 (11104): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 12:17 runtime_log
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas   1320960 Feb 24 12:17 result.tar.gz
2025-02-24 06:17:38 (11104): Guest Log: -rw-r--r--. 1 atlas atlas     10978 Feb 24 12:17 runtime_log.err
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas       670 Feb 24 12:17 8zhMDmFSH66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5wuKDmpjSubm.diag
2025-02-24 06:17:38 (11104): Guest Log: Looking for outputfile HITS.43205094._037764.pool.root.1
2025-02-24 06:17:38 (11104): Guest Log: HITS file was successfully produced
2025-02-24 06:17:38 (11104): Guest Log: -rw-------. 1 atlas atlas 325495474 Feb 24 12:16 /home/atlas/RunAtlas/HITS.43205094._037764.pool.root.1
2025-02-24 06:17:39 (11104): Guest Log: Successfully finished the ATLAS job!
2025-02-24 06:17:39 (11104): Guest Log: Copying the results back to the shared directory!
2025-02-24 06:17:39 (11104): Guest Log:  *** Contents of shared directory: ***
2025-02-24 06:17:39 (11104): Guest Log: total 655532
2025-02-24 06:17:39 (11104): Guest Log: -rwxrwxrwx. 1 root root 343905982 Feb 24 09:12 ATLAS.root_0
2025-02-24 06:17:39 (11104): Guest Log: -rwxrwxrwx. 1 root root 325495474 Feb 24  2025 HITS.pool.root.1
2025-02-24 06:17:39 (11104): Guest Log: -rwxrwxrwx. 1 root root      8884 Feb 24 09:12 init_data.xml
2025-02-24 06:17:39 (11104): Guest Log: -rwxrwxrwx. 1 root root    503562 Feb 23 16:27 input.tar.gz
2025-02-24 06:17:39 (11104): Guest Log: -rwxrwxrwx. 1 root root   1320960 Feb 24  2025 result.tar.gz
2025-02-24 06:17:39 (11104): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 16:27 start_atlas.sh
2025-02-24 06:17:39 (11104): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 06:17:39 (11104): VM Completion File Detected.
2025-02-24 06:17:39 (11104): Powering off VM.
2025-02-24 06:17:40 (11104): Successfully stopped VM.
2025-02-24 06:17:40 (11104): Deregistering VM. (boinc_f0fd54cef421ef87, slot#2)
2025-02-24 06:17:40 (11104): Removing network bandwidth throttle group from VM.
2025-02-24 06:17:40 (11104): Removing VM from VirtualBox.
06:17:46 (11104): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN