Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:45:43 (15474): wrapper (7.7.26015): starting
18:45:43 (15474): wrapper: running run_atlas (--nthreads 12)
[2025-02-23 18:45:43] Arguments: --nthreads 12
[2025-02-23 18:45:43] Threads: 12
[2025-02-23 18:45:43] Checking for CVMFS
[2025-02-23 18:45:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-23 18:45:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-23 18:45:44] Running cvmfs_config stat atlas.cern.ch
[2025-02-23 18:45:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-23 18:45:45] 2.11.2.0 13457 1933 86616 142983 0 185 23530715 25165825 0 130560 0 20038828 99.994 564322 9268 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-02-23 18:45:45] CVMFS is ok
[2025-02-23 18:45:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 18:45:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 18:45:45] Further information can be found at the LHC@home message board.
[2025-02-23 18:45:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 18:45:45] Checking for apptainer binary...
[2025-02-23 18:45:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-23 18:45:45] Running /usr/bin/apptainer --version
[2025-02-23 18:45:45] apptainer version 1.3.2-1.el7
[2025-02-23 18:45:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 18:45:49] cg-vwn116.simple-grid.lan
[2025-02-23 18:45:49] apptainer works
[2025-02-23 18:45:49] Set ATHENA_PROC_NUMBER=12
[2025-02-23 18:45:49] Set ATHENA_CORE_NUMBER=12
[2025-02-23 18:45:49] Starting ATLAS job with PandaID=6524224469
[2025-02-23 18:45:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 18:54:50]  *** The last 200 lines of the pilot log: ***
[2025-02-23 18:54:51] 2025-02-23 17:54:34,711 | INFO     | PID=19140 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-23 18:54:51] 2025-02-23 17:54:36,375 | INFO     | monitor loop #143: job 0:6524224469 is in state 'failed'
[2025-02-23 18:54:51] 2025-02-23 17:54:36,376 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-23 18:54:51] 2025-02-23 17:54:37,024 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-23 18:54:51] 2025-02-23 17:54:37,026 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6524224469/memory_monitor_output.txt
[2025-02-23 18:54:51] 2025-02-23 17:54:37,027 | INFO     | memory summary dictionary not yet available
[2025-02-23 18:54:51] 2025-02-23 17:54:37,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-23 18:54:51] 2025-02-23 17:54:37,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-23 18:54:51] 2025-02-23 17:54:37,030 | INFO     | ..............................
[2025-02-23 18:54:51] 2025-02-23 17:54:37,030 | INFO     | . Timing measurements:
[2025-02-23 18:54:51] 2025-02-23 17:54:37,031 | INFO     | . get job = 0 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,031 | INFO     | . initial setup = 3 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,031 | INFO     | . payload setup = 24 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,032 | INFO     | . stage-in = 0 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,032 | INFO     | . payload execution = 225 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,032 | INFO     | . stage-out = 0 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,033 | INFO     | . log creation = 0 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,033 | INFO     | ..............................
[2025-02-23 18:54:51] 2025-02-23 17:54:37,034 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-23 18:54:51] 2025-02-23 17:54:37,035 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6524224469/pilotlog.txt
[2025-02-23 18:54:51] 2025-02-23 17:54:37,090 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-02-23 18:54:51] - Log from pilotlog.txt -
[2025-02-23 18:54:51] 2025-02-23 17:54:34,711 | INFO     | PID=19140 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-23 18:54:51] 2025-02-23 17:54:36,375 | INFO     | monitor loop #143: job 0:6524224469 is in state 'failed'
[2025-02-23 18:54:51] 2025-02-23 17:54:36,376 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-23 18:54:51] 2025-02-23 17:54:37,024 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-23 18:54:51] 2025-02-23 17:54:37,026 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6524224469/memory_monitor_output.txt
[2025-02-23 18:54:51] 2025-02-23 17:54:37,027 | INFO     | memory summary dictionary not yet available
[2025-02-23 18:54:51] 2025-02-23 17:54:37,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-23 18:54:51] 2025-02-23 17:54:37,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-23 18:54:51] 2025-02-23 17:54:37,030 | INFO     | ..............................
[2025-02-23 18:54:51] 2025-02-23 17:54:37,030 | INFO     | . Timing measurements:
[2025-02-23 18:54:51] 2025-02-23 17:54:37,031 | INFO     | . get job = 0 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,031 | INFO     | . initial setup = 3 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,031 | INFO     | . payload setup = 24 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,032 | INFO     | . stage-in = 0 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,032 | INFO     | . payload execution = 225 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,032 | INFO     | . stage-out = 0 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,033 | INFO     | . log creation = 0 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,033 | INFO     | ..............................
[2025-02-23 18:54:51] 2025-02-23 17:54:37,034 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-23 18:54:51] 2025-02-23 17:54:37,035 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6524224469/pilotlog.txt
[2025-02-23 18:54:51] 2025-02-23 17:54:37,091 | WARNING  | 
[2025-02-23 18:54:51] [begin log extracts]
[2025-02-23 18:54:51] - Log from pilotlog.txt -
[2025-02-23 18:54:51] 2025-02-23 17:54:34,711 | INFO     | PID=19140 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-23 18:54:51] 2025-02-23 17:54:36,375 | INFO     | monitor loop #143: job 0:6524224469 is in state 'failed'
[2025-02-23 18:54:51] 2025-02-23 17:54:36,376 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-23 18:54:51] 2025-02-23 17:54:37,024 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-23 18:54:51] 2025-02-23 17:54:37,026 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6524224469/memory_monitor_output.txt
[2025-02-23 18:54:51] 2025-02-23 17:54:37,027 | INFO     | memory summary dictionary not yet available
[2025-02-23 18:54:51] 2025-02-23 17:54:37,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-23 18:54:51] 2025-02-23 17:54:37,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-23 18:54:51] 2025-02-23 17:54:37,030 | INFO     | ..............................
[2025-02-23 18:54:51] 2025-02-23 17:54:37,030 | INFO     | . Timing measurements:
[2025-02-23 18:54:51] 2025-02-23 17:54:37,031 | INFO     | . get job = 0 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,031 | INFO     | . initial setup = 3 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,031 | INFO     | . payload setup = 24 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,032 | INFO     | . stage-in = 0 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,032 | INFO     | . payload execution = 225 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,032 | INFO     | . stage-out = 0 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,033 | INFO     | . log creation = 0 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,033 | INFO     | ..............................
[2025-02-23 18:54:51] 2025-02-23 17:54:37,034 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-23 18:54:51] 2025-02-23 17:54:37,035 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6524224469/pilotlog.txt
[2025-02-23 18:54:51] [end log extracts]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,092 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-02-23 18:54:51] 2025-02-23 17:54:37,093 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 17:51:09,429 CRITICAL Transform executor raised TransformValidationExcep
[2025-02-23 18:54:51] 2025-02-23 17:54:37,261 | INFO     | 
[2025-02-23 18:54:51] 2025-02-23 17:54:37,262 | INFO     | job summary report
[2025-02-23 18:54:51] 2025-02-23 17:54:37,263 | INFO     | --------------------------------------------------
[2025-02-23 18:54:51] 2025-02-23 17:54:37,263 | INFO     | PanDA job id: 6524224469
[2025-02-23 18:54:51] 2025-02-23 17:54:37,263 | INFO     | task id: 43205075
[2025-02-23 18:54:51] 2025-02-23 17:54:37,264 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 17:51:09,429 CRITICAL Transform executor raised TransformValidationExceptio
[2025-02-23 18:54:51] 2025-02-23 17:54:37,264 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 18:54:51] 2025-02-23 17:54:37,264 | INFO     | pilot state: failed 
[2025-02-23 18:54:51] 2025-02-23 17:54:37,265 | INFO     | transexitcode: 65
[2025-02-23 18:54:51] 2025-02-23 17:54:37,265 | INFO     | exeerrorcode: 65
[2025-02-23 18:54:51] 2025-02-23 17:54:37,265 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-02-23 18:54:51] 2025-02-23 17:54:37,266 | INFO     | exitcode: 65
[2025-02-23 18:54:51] 2025-02-23 17:54:37,266 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-02-23 18:54:51] 2025-02-23 17:54:37,266 | INFO     | cpuconsumptiontime: 261 s
[2025-02-23 18:54:51] 2025-02-23 17:54:37,267 | INFO     | nevents: 0
[2025-02-23 18:54:51] 2025-02-23 17:54:37,267 | INFO     | neventsw: 0
[2025-02-23 18:54:51] 2025-02-23 17:54:37,267 | INFO     | pid: 25633
[2025-02-23 18:54:51] 2025-02-23 17:54:37,268 | INFO     | pgrp: 25633
[2025-02-23 18:54:51] 2025-02-23 17:54:37,268 | INFO     | corecount: 12
[2025-02-23 18:54:51] 2025-02-23 17:54:37,268 | INFO     | event service: False
[2025-02-23 18:54:51] 2025-02-23 17:54:37,269 | INFO     | sizes: {0: 2382539, 1: 2383224, 2: 2383423, 3: 2383423, 13: 2383451, 17: 2383713, 24: 2383869, 314: 2407289, 315: 2407293, 316: 2411587, 318: 2411643, 452: 2412093
[2025-02-23 18:54:51] 2025-02-23 17:54:37,269 | INFO     | --------------------------------------------------
[2025-02-23 18:54:51] 2025-02-23 17:54:37,269 | INFO     | 
[2025-02-23 18:54:51] 2025-02-23 17:54:37,270 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-02-23 18:54:51] 2025-02-23 17:54:37,352 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,354 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,354 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,357 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,358 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,358 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,361 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 18:54:51] 2025-02-23 17:54:37,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,362 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 18:54:51] 2025-02-23 17:54:37,362 | INFO     | job 6524224469 has completed (purged errors)
[2025-02-23 18:54:51] 2025-02-23 17:54:37,363 | INFO     | overall cleanup function is called
[2025-02-23 18:54:51] 2025-02-23 17:54:38,373 | INFO     | --- collectZombieJob: --- 10, [25633]
[2025-02-23 18:54:51] 2025-02-23 17:54:38,374 | INFO     | zombie collector waiting for pid 25633
[2025-02-23 18:54:51] 2025-02-23 17:54:38,374 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 18:54:51] 2025-02-23 17:54:38,375 | INFO     | collected zombie processes
[2025-02-23 18:54:51] 2025-02-23 17:54:38,375 | INFO     | will attempt to kill all subprocesses of pid=25633
[2025-02-23 18:54:51] 2025-02-23 17:54:38,536 | INFO     | process IDs to be killed: [25633] (in reverse order)
[2025-02-23 18:54:51] 2025-02-23 17:54:38,681 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 18:54:51] 2025-02-23 17:54:38,682 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 18:54:51] 2025-02-23 17:54:38,690 | INFO     | did not find any defunct processes belonging to 25633
[2025-02-23 18:54:51] 2025-02-23 17:54:38,697 | INFO     | did not find any defunct processes belonging to 25633
[2025-02-23 18:54:51] 2025-02-23 17:54:38,698 | INFO     | ready for new job
[2025-02-23 18:54:51] 2025-02-23 17:54:38,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 18:54:51] 2025-02-23 17:54:38,703 | INFO     | **************************************
[2025-02-23 18:54:51] 2025-02-23 17:54:38,703 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 18:54:51] 2025-02-23 17:54:38,704 | INFO     | **************************************
[2025-02-23 18:54:51] 2025-02-23 17:54:38,704 | INFO     | 
[2025-02-23 18:54:51] 2025-02-23 17:54:38,706 | INFO     | pilot is running in a VM
[2025-02-23 18:54:51] 2025-02-23 17:54:38,706 | INFO     | architecture information:
[2025-02-23 18:54:51] 2025-02-23 17:54:38,708 | INFO     | executing command: cat /etc/os-release
[2025-02-23 18:54:51] 2025-02-23 17:54:38,770 | INFO     | cat /etc/os-release:
[2025-02-23 18:54:51] NAME="CentOS Linux"
[2025-02-23 18:54:51] VERSION="7 (Core)"
[2025-02-23 18:54:51] ID="centos"
[2025-02-23 18:54:51] ID_LIKE="rhel fedora"
[2025-02-23 18:54:51] VERSION_ID="7"
[2025-02-23 18:54:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 18:54:51] ANSI_COLOR="0;31"
[2025-02-23 18:54:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 18:54:51] HOME_URL="https://www.centos.org/"
[2025-02-23 18:54:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 18:54:51] 
[2025-02-23 18:54:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 18:54:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 18:54:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 18:54:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 18:54:51] 
[2025-02-23 18:54:51] 2025-02-23 17:54:38,771 | INFO     | **************************************
[2025-02-23 18:54:51] 2025-02-23 17:54:39,277 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-02-23 18:54:51] 2025-02-23 17:54:39,343 | INFO     | sufficient remaining disk space (255696306176 B)
[2025-02-23 18:54:51] 2025-02-23 17:54:39,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 18:54:51] 2025-02-23 17:54:39,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 18:54:51] 2025-02-23 17:54:39,346 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-23 18:54:51] 2025-02-23 17:54:39,347 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 18:54:51] 2025-02-23 17:54:39,348 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 18:54:51] 2025-02-23 17:54:39,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 18:54:51] 2025-02-23 17:54:39,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 18:54:51] 2025-02-23 17:54:39,403 | INFO     | all data control threads have been joined
[2025-02-23 18:54:51] 2025-02-23 17:54:39,655 | INFO     | all payload control threads have been joined
[2025-02-23 18:54:51] 2025-02-23 17:54:39,899 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 18:54:51] 2025-02-23 17:54:39,900 | INFO     | aborting loop
[2025-02-23 18:54:51] 2025-02-23 17:54:39,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 18:54:51] 2025-02-23 17:54:40,352 | INFO     | [job] retrieve thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:40,409 | INFO     | [data] control thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:40,661 | INFO     | [payload] control thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:40,842 | INFO     | all job control threads have been joined
[2025-02-23 18:54:51] 2025-02-23 17:54:40,900 | INFO     | [job] validate thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:40,902 | INFO     | [job] job monitor thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:41,077 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:41,123 | INFO     | [data] copytool_in thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:41,197 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:41,268 | INFO     | [payload] validate_post thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:41,356 | INFO     | [data] copytool_out thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:41,369 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:41,755 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:41,849 | INFO     | [job] control thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:41,946 | INFO     | [payload] failed_post thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:42,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 18:54:51] 2025-02-23 17:54:43,281 | INFO     | [job] queue monitor thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:43,910 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 18:54:51] 2025-02-23 17:54:45,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140153521575744)>', '<ExcThread(monitor, started 140152617817856)>']
[2025-02-23 18:54:51] 2025-02-23 17:54:45,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 18:54:51] 2025-02-23 17:54:45,382 | INFO     | [monitor] control thread has ended
[2025-02-23 18:54:51] 2025-02-23 17:54:50,140 | INFO     | all workflow threads have been joined
[2025-02-23 18:54:51] 2025-02-23 17:54:50,141 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 18:54:51] 2025-02-23 17:54:50,142 | INFO     | traces error code: 0
[2025-02-23 18:54:51] 2025-02-23 17:54:50,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 18:54:51] 2025-02-23 17:54:50,390 [wrapper] ==== pilot stdout END ====
[2025-02-23 18:54:51] 2025-02-23 17:54:50,412 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 18:54:51] 2025-02-23 17:54:50,425 [wrapper] pilotpid: 19140
[2025-02-23 18:54:51] 2025-02-23 17:54:50,437 [wrapper] Pilot exit status: 0
[2025-02-23 18:54:51] 2025-02-23 17:54:50,487 [wrapper] pandaids: 6524224469
[2025-02-23 18:54:51] 2025-02-23 17:54:50,592 [wrapper] cleanup supervisor_pilot 19146 19141
[2025-02-23 18:54:51] 2025-02-23 17:54:50,604 [wrapper] Test setup, not cleaning
[2025-02-23 18:54:51] 2025-02-23 17:54:50,628 [wrapper] apfmon messages muted
[2025-02-23 18:54:51] 2025-02-23 17:54:50,641 [wrapper] ==== wrapper stdout END ====
[2025-02-23 18:54:51] 2025-02-23 17:54:50,652 [wrapper] ==== wrapper stderr END ====
[2025-02-23 18:54:51]  *** Error codes and diagnostics ***
[2025-02-23 18:54:51]     "exeErrorCode": 65,
[2025-02-23 18:54:51]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-02-23 18:54:51]     "pilotErrorCode": 1305,
[2025-02-23 18:54:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 17:51:09,429 CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-02-23 18:54:51]  *** Listing of results directory ***
[2025-02-23 18:54:51] total 338252
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc    491065 Feb 23 11:09 pilot3.tar.gz
[2025-02-23 18:54:51] -rwx------. 1 boinc boinc     35865 Feb 23 11:27 runpilot2-wrapper.sh
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc      5118 Feb 23 11:27 queuedata.json
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc       100 Feb 23 18:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 18:54:51] -rwxr-xr-x. 1 boinc boinc      7986 Feb 23 18:45 run_atlas
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc       105 Feb 23 18:45 job.xml
[2025-02-23 18:54:51] -rw-r--r--. 2 boinc boinc 342192770 Feb 23 18:45 EVNT.43092757._000568.pool.root.1
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc      6119 Feb 23 18:45 init_data.xml
[2025-02-23 18:54:51] -rw-r--r--. 2 boinc boinc    503546 Feb 23 18:45 input.tar.gz
[2025-02-23 18:54:51] -rw-r--r--. 2 boinc boinc     17569 Feb 23 18:45 start_atlas.sh
[2025-02-23 18:54:51] drwxrwx--x. 2 boinc boinc        68 Feb 23 18:45 shared
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc         0 Feb 23 18:45 boinc_lockfile
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc      2555 Feb 23 18:45 pandaJob.out
[2025-02-23 18:54:51] -rw-------. 1 boinc boinc       424 Feb 23 18:45 setup.sh.local
[2025-02-23 18:54:51] -rw-------. 1 boinc boinc    987744 Feb 23 18:46 agis_schedconf.cvmfs.json
[2025-02-23 18:54:51] -rw-------. 1 boinc boinc   1582569 Feb 23 18:46 agis_ddmendpoints.agis.ALL.json
[2025-02-23 18:54:51] drwx------. 4 boinc boinc      4096 Feb 23 18:46 pilot3
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc       526 Feb 23 18:51 boinc_task_state.xml
[2025-02-23 18:54:51] -rw-------. 1 boinc boinc     48029 Feb 23 18:52 log.43205075._060019.job.log.tgz.1
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc        24 Feb 23 18:54 wrapper_checkpoint.txt
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc      8192 Feb 23 18:54 boinc_mmap_file
[2025-02-23 18:54:51] -rw-------. 1 boinc boinc        95 Feb 23 18:54 pilot_heartbeat.json
[2025-02-23 18:54:51] -rw-------. 1 boinc boinc      8054 Feb 23 18:54 heartbeat.json
[2025-02-23 18:54:51] -rw-------. 1 boinc boinc      4401 Feb 23 18:54 pilotlog.txt
[2025-02-23 18:54:51] -rw-------. 1 boinc boinc    145614 Feb 23 18:54 log.43205075._060019.job.log.1
[2025-02-23 18:54:51] -rw-------. 1 boinc boinc       188 Feb 23 18:54 output.list
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc       620 Feb 23 18:54 runtime_log
[2025-02-23 18:54:51] -rw-------. 1 boinc boinc    215040 Feb 23 18:54 result.tar.gz
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc     10861 Feb 23 18:54 runtime_log.err
[2025-02-23 18:54:51] -rw-------. 1 boinc boinc       639 Feb 23 18:54 akhLDm3NO66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDNvKDm4lNMtn.diag
[2025-02-23 18:54:51] -rw-r--r--. 1 boinc boinc     22157 Feb 23 18:54 stderr.txt
[2025-02-23 18:54:51] No HITS result produced
[2025-02-23 18:54:51]  *** Contents of shared directory: ***
[2025-02-23 18:54:51] total 334900
[2025-02-23 18:54:51] -rw-r--r--. 2 boinc boinc 342192770 Feb 23 18:45 ATLAS.root_0
[2025-02-23 18:54:51] -rw-r--r--. 2 boinc boinc    503546 Feb 23 18:45 input.tar.gz
[2025-02-23 18:54:51] -rw-r--r--. 2 boinc boinc     17569 Feb 23 18:45 start_atlas.sh
[2025-02-23 18:54:51] -rw-------. 1 boinc boinc    215040 Feb 23 18:54 result.tar.gz
18:54:53 (15474): run_atlas exited; CPU time 196.264967
18:54:53 (15474): called boinc_finish(0)

</stderr_txt>
]]>

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