Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:36:23 (3849890): wrapper (7.7.26015): starting
10:36:23 (3849890): wrapper: running run_atlas (--nthreads 8)
[2025-02-23 10:36:23] Arguments: --nthreads 8
[2025-02-23 10:36:23] Threads: 8
[2025-02-23 10:36:23] Checking for CVMFS
[2025-02-23 10:36:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-23 10:36:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-23 10:36:25] Running cvmfs_config stat atlas.cern.ch
[2025-02-23 10:36:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-23 10:36:27] 2.11.5.0 4008888 75510 889428 142980 1 465 8870728 37641217 46581 130560 0 261196 95.239 3517867 26964 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-23 10:36:27] CVMFS is ok
[2025-02-23 10:36:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 10:36:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 10:36:27] Further information can be found at the LHC@home message board.
[2025-02-23 10:36:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 10:36:27] Checking for apptainer binary...
[2025-02-23 10:36:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-23 10:36:27] Running /usr/bin/apptainer --version
[2025-02-23 10:36:27] apptainer version 1.3.6-1.el9
[2025-02-23 10:36:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 10:36:28] c-1-1.aglt2.org
[2025-02-23 10:36:28] apptainer works
[2025-02-23 10:36:28] Set ATHENA_PROC_NUMBER=8
[2025-02-23 10:36:28] Set ATHENA_CORE_NUMBER=8
[2025-02-23 10:36:28] Starting ATLAS job with PandaID=6523634175
[2025-02-23 10:36:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 03:37:24]  *** The last 200 lines of the pilot log: ***
[2025-02-24 03:37:25] 2025-02-24 08:37:00,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-24 03:37:25] 2025-02-24 08:37:03,079 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-24 03:37:25] 2025-02-24 08:37:03,080 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6523634175/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 03:37:25] 2025-02-24 08:37:03,081 | INFO     | extracted standard info from prmon json
[2025-02-24 03:37:25] 2025-02-24 08:37:03,081 | INFO     | extracted standard memory fields from prmon json
[2025-02-24 03:37:25] 2025-02-24 08:37:03,081 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-24 03:37:25] 2025-02-24 08:37:03,081 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-24 03:37:25] 2025-02-24 08:37:03,081 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-24 03:37:25] 2025-02-24 08:37:03,212 | INFO     | fitting pss+swap vs Time
[2025-02-24 03:37:25] 2025-02-24 08:37:03,214 | INFO     | model: linear, x: [1740325296.0, 1740325357.0, 1740325418.0, 1740325479.0, 1740325540.0, 1740325601.0, 1740325662.0, 1740325723.0, 1740325784.0, 1740325845.0, 1740
[2025-02-24 03:37:25] 2025-02-24 08:37:03,215 | INFO     | sum of square deviations: 308221141153.8998
[2025-02-24 03:37:25] 2025-02-24 08:37:03,367 | INFO     | sum of deviations: 637088739921.9839
[2025-02-24 03:37:25] 2025-02-24 08:37:03,367 | INFO     | mean x: 1740355705.01002
[2025-02-24 03:37:25] 2025-02-24 08:37:03,369 | INFO     | mean y: 2131577.3016032064
[2025-02-24 03:37:25] 2025-02-24 08:37:03,369 | INFO     | -- intersect: -3595159052.9580755
[2025-02-24 03:37:25] 2025-02-24 08:37:03,370 | INFO     | intersect: -3595159052.9580755
[2025-02-24 03:37:25] 2025-02-24 08:37:03,395 | INFO     | chi2: 7.093404021377716
[2025-02-24 03:37:25] 2025-02-24 08:37:03,396 | INFO     | model: linear, x: [1740325296.0, 1740325357.0, 1740325418.0, 1740325479.0, 1740325540.0, 1740325601.0, 1740325662.0, 1740325723.0, 1740325784.0, 1740325845.0, 1740
[2025-02-24 03:37:25] 2025-02-24 08:37:03,398 | INFO     | sum of square deviations: 303611683930.13916
[2025-02-24 03:37:25] 2025-02-24 08:37:03,442 | INFO     | monitor loop #3018: job 0:6523634175 is in state 'finished'
[2025-02-24 03:37:25] 2025-02-24 08:37:03,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-24 03:37:25] 2025-02-24 08:37:03,564 | INFO     | sum of deviations: 738915260229.2509
[2025-02-24 03:37:25] 2025-02-24 08:37:03,564 | INFO     | mean x: 1740355552.510574
[2025-02-24 03:37:25] 2025-02-24 08:37:03,564 | INFO     | mean y: 2134935.595166163
[2025-02-24 03:37:25] 2025-02-24 08:37:03,565 | INFO     | -- intersect: -4233457250.213712
[2025-02-24 03:37:25] 2025-02-24 08:37:03,565 | INFO     | intersect: -4233457250.213712
[2025-02-24 03:37:25] 2025-02-24 08:37:03,566 | INFO     | chi2: 5.772948608846458
[2025-02-24 03:37:25] 2025-02-24 08:37:03,566 | INFO     | current chi2=5.772948608846458 (change=18.61525733698153 %)
[2025-02-24 03:37:25] 2025-02-24 08:37:03,566 | INFO     | right removable region: 992
[2025-02-24 03:37:25] 2025-02-24 08:37:03,567 | INFO     | model: linear, x: [1740325601.0, 1740325662.0, 1740325723.0, 1740325784.0, 1740325845.0, 1740325906.0, 1740325967.0, 1740326028.0, 1740326090.0, 1740326151.0, 1740
[2025-02-24 03:37:25] 2025-02-24 08:37:03,587 | INFO     | sum of square deviations: 303611494830.0924
[2025-02-24 03:37:25] 2025-02-24 08:37:03,741 | INFO     | sum of deviations: 411659325847.9299
[2025-02-24 03:37:25] 2025-02-24 08:37:03,741 | INFO     | mean x: 1740355857.512588
[2025-02-24 03:37:25] 2025-02-24 08:37:03,742 | INFO     | mean y: 2139029.8056394765
[2025-02-24 03:37:25] 2025-02-24 08:37:03,742 | INFO     | -- intersect: -2357566486.0874915
[2025-02-24 03:37:25] 2025-02-24 08:37:03,742 | INFO     | intersect: -2357566486.0874915
[2025-02-24 03:37:25] 2025-02-24 08:37:03,770 | INFO     | chi2: 4.478475401828194
[2025-02-24 03:37:25] 2025-02-24 08:37:03,770 | INFO     | current chi2=4.478475401828194 (change=36.86422783291057 %)
[2025-02-24 03:37:25] 2025-02-24 08:37:03,771 | INFO     | model: linear, x: [1740325906.0, 1740325967.0, 1740326028.0, 1740326090.0, 1740326151.0, 1740326212.0, 1740326272.0, 1740326333.0, 1740326394.0, 1740326455.0, 1740
[2025-02-24 03:37:25] 2025-02-24 08:37:03,806 | INFO     | sum of square deviations: 299048035418.77246
[2025-02-24 03:37:25] 2025-02-24 08:37:03,949 | INFO     | sum of deviations: 269913991143.89948
[2025-02-24 03:37:25] 2025-02-24 08:37:03,950 | INFO     | mean x: 1740356010.0151823
[2025-02-24 03:37:25] 2025-02-24 08:37:03,950 | INFO     | mean y: 2143765.340080972
[2025-02-24 03:37:25] 2025-02-24 08:37:03,950 | INFO     | -- intersect: -1568662195.704471
[2025-02-24 03:37:25] 2025-02-24 08:37:03,950 | INFO     | intersect: -1568662195.704471
[2025-02-24 03:37:25] 2025-02-24 08:37:03,961 | INFO     | chi2: 3.525402490154865
[2025-02-24 03:37:25] 2025-02-24 08:37:03,961 | INFO     | current chi2=3.525402490154865 (change=21.281191167964614 %)
[2025-02-24 03:37:25] 2025-02-24 08:37:03,961 | INFO     | left removable region: 20
[2025-02-24 03:37:25] 2025-02-24 08:37:03,962 | INFO     | model: linear, x: [1740326516.0, 1740326577.0, 1740326639.0, 1740326699.0, 1740326760.0, 1740326821.0, 1740326883.0, 1740326944.0, 1740327005.0, 1740327066.0, 1740
[2025-02-24 03:37:25] 2025-02-24 08:37:03,963 | INFO     | sum of square deviations: 284753065871.6654
[2025-02-24 03:37:25] 2025-02-24 08:37:04,024 | INFO     | sum of deviations: 159507494711.31445
[2025-02-24 03:37:25] 2025-02-24 08:37:04,029 | INFO     | mean x: 1740356132.0185184
[2025-02-24 03:37:25] 2025-02-24 08:37:04,029 | INFO     | mean y: 2154606.371399177
[2025-02-24 03:37:25] 2025-02-24 08:37:04,030 | INFO     | -- intersect: -972724612.8355268
[2025-02-24 03:37:25] 2025-02-24 08:37:04,030 | INFO     | intersect: -972724612.8355268
[2025-02-24 03:37:25] 2025-02-24 08:37:04,031 | INFO     | chi2: 1.0430215274052916
[2025-02-24 03:37:25] 2025-02-24 08:37:04,031 | INFO     | -- intersect: -972724612.8355268
[2025-02-24 03:37:25] 2025-02-24 08:37:04,031 | INFO     | current memory leak: 0.56 B/s (using 972 data points, chi2=1.04)
[2025-02-24 03:37:25] 2025-02-24 08:37:04,039 | INFO     | ..............................
[2025-02-24 03:37:25] 2025-02-24 08:37:04,039 | INFO     | . Timing measurements:
[2025-02-24 03:37:25] 2025-02-24 08:37:04,039 | INFO     | . get job = 1 s
[2025-02-24 03:37:25] 2025-02-24 08:37:04,039 | INFO     | . initial setup = 12 s
[2025-02-24 03:37:25] 2025-02-24 08:37:04,039 | INFO     | . payload setup = 54 s
[2025-02-24 03:37:25] 2025-02-24 08:37:04,039 | INFO     | . stage-in = 0 s
[2025-02-24 03:37:25] 2025-02-24 08:37:04,039 | INFO     | . payload execution = 60911 s
[2025-02-24 03:37:25] 2025-02-24 08:37:04,039 | INFO     | . stage-out = 7 s
[2025-02-24 03:37:25] 2025-02-24 08:37:04,039 | INFO     | . log creation = 1 s
[2025-02-24 03:37:25] 2025-02-24 08:37:04,039 | INFO     | ..............................
[2025-02-24 03:37:25] 2025-02-24 08:37:04,933 | INFO     | 
[2025-02-24 03:37:25] 2025-02-24 08:37:04,933 | INFO     | job summary report
[2025-02-24 03:37:25] 2025-02-24 08:37:04,933 | INFO     | --------------------------------------------------
[2025-02-24 03:37:25] 2025-02-24 08:37:04,934 | INFO     | PanDA job id: 6523634175
[2025-02-24 03:37:25] 2025-02-24 08:37:04,934 | INFO     | task id: 43205094
[2025-02-24 03:37:25] 2025-02-24 08:37:04,934 | INFO     | errors: (none)
[2025-02-24 03:37:25] 2025-02-24 08:37:04,934 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 03:37:25] 2025-02-24 08:37:04,934 | INFO     | pilot state: finished 
[2025-02-24 03:37:25] 2025-02-24 08:37:04,934 | INFO     | transexitcode: 0
[2025-02-24 03:37:25] 2025-02-24 08:37:04,934 | INFO     | exeerrorcode: 0
[2025-02-24 03:37:25] 2025-02-24 08:37:04,934 | INFO     | exeerrordiag: 
[2025-02-24 03:37:25] 2025-02-24 08:37:04,934 | INFO     | exitcode: 0
[2025-02-24 03:37:25] 2025-02-24 08:37:04,934 | INFO     | exitmsg: OK
[2025-02-24 03:37:25] 2025-02-24 08:37:04,935 | INFO     | cpuconsumptiontime: 99758 s
[2025-02-24 03:37:25] 2025-02-24 08:37:04,935 | INFO     | nevents: 400
[2025-02-24 03:37:25] 2025-02-24 08:37:04,935 | INFO     | neventsw: 0
[2025-02-24 03:37:25] 2025-02-24 08:37:04,935 | INFO     | pid: 3907054
[2025-02-24 03:37:25] 2025-02-24 08:37:04,935 | INFO     | pgrp: 3907054
[2025-02-24 03:37:25] 2025-02-24 08:37:04,935 | INFO     | corecount: 8
[2025-02-24 03:37:25] 2025-02-24 08:37:04,935 | INFO     | event service: False
[2025-02-24 03:37:25] 2025-02-24 08:37:04,935 | INFO     | sizes: {0: 2382482, 1: 2383083, 2: 2383167, 3: 2383223, 4: 2383394, 5: 2383422, 6: 2383606, 17: 2383634, 28: 2383662, 38: 2383690, 50: 2383864, 51: 2384232, 60: 23
[2025-02-24 03:37:25] 2025-02-24 08:37:04,935 | INFO     | --------------------------------------------------
[2025-02-24 03:37:25] 2025-02-24 08:37:04,935 | INFO     | 
[2025-02-24 03:37:25] 2025-02-24 08:37:04,936 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-02-24 03:37:25] 2025-02-24 08:37:05,130 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,131 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,131 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,131 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,131 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,132 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,132 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,132 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,132 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,132 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,132 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 03:37:25] 2025-02-24 08:37:05,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,132 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 03:37:25] 2025-02-24 08:37:05,132 | INFO     | job 6523634175 has completed (purged errors)
[2025-02-24 03:37:25] 2025-02-24 08:37:05,132 | INFO     | overall cleanup function is called
[2025-02-24 03:37:25] 2025-02-24 08:37:06,167 | INFO     | --- collectZombieJob: --- 10, [3907054]
[2025-02-24 03:37:25] 2025-02-24 08:37:06,167 | INFO     | zombie collector waiting for pid 3907054
[2025-02-24 03:37:25] 2025-02-24 08:37:06,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 03:37:25] 2025-02-24 08:37:06,168 | INFO     | collected zombie processes
[2025-02-24 03:37:25] 2025-02-24 08:37:06,168 | INFO     | will attempt to kill all subprocesses of pid=3907054
[2025-02-24 03:37:25] 2025-02-24 08:37:07,530 | INFO     | process IDs to be killed: [3907054] (in reverse order)
[2025-02-24 03:37:25] 2025-02-24 08:37:08,647 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 03:37:25] 2025-02-24 08:37:08,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 03:37:25] 2025-02-24 08:37:08,899 | INFO     | did not find any defunct processes belonging to 3907054
[2025-02-24 03:37:25] 2025-02-24 08:37:09,249 | INFO     | did not find any defunct processes belonging to 3907054
[2025-02-24 03:37:25] 2025-02-24 08:37:09,249 | INFO     | ready for new job
[2025-02-24 03:37:25] 2025-02-24 08:37:09,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 03:37:25] 2025-02-24 08:37:09,384 | INFO     | **************************************
[2025-02-24 03:37:25] 2025-02-24 08:37:09,384 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 03:37:25] 2025-02-24 08:37:09,384 | INFO     | **************************************
[2025-02-24 03:37:25] 2025-02-24 08:37:09,384 | INFO     | 
[2025-02-24 03:37:25] 2025-02-24 08:37:09,461 | INFO     | architecture information:
[2025-02-24 03:37:25] 2025-02-24 08:37:09,470 | INFO     | executing command: cat /etc/os-release
[2025-02-24 03:37:25] 2025-02-24 08:37:09,643 | INFO     | cat /etc/os-release:
[2025-02-24 03:37:25] NAME="CentOS Linux"
[2025-02-24 03:37:25] VERSION="7 (Core)"
[2025-02-24 03:37:25] ID="centos"
[2025-02-24 03:37:25] ID_LIKE="rhel fedora"
[2025-02-24 03:37:25] VERSION_ID="7"
[2025-02-24 03:37:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 03:37:25] ANSI_COLOR="0;31"
[2025-02-24 03:37:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 03:37:25] HOME_URL="https://www.centos.org/"
[2025-02-24 03:37:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 03:37:25] 
[2025-02-24 03:37:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 03:37:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 03:37:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 03:37:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 03:37:25] 
[2025-02-24 03:37:25] 2025-02-24 08:37:09,644 | INFO     | **************************************
[2025-02-24 03:37:25] 2025-02-24 08:37:10,146 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-02-24 03:37:25] 2025-02-24 08:37:10,289 | INFO     | sufficient remaining disk space (73420242944 B)
[2025-02-24 03:37:25] 2025-02-24 08:37:10,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 03:37:25] 2025-02-24 08:37:10,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 03:37:25] 2025-02-24 08:37:10,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 03:37:25] 2025-02-24 08:37:10,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 03:37:25] 2025-02-24 08:37:10,290 | INFO     | aborting loop
[2025-02-24 03:37:25] 2025-02-24 08:37:10,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 03:37:25] 2025-02-24 08:37:10,304 | INFO     | all job control threads have been joined
[2025-02-24 03:37:25] 2025-02-24 08:37:10,731 | INFO     | all data control threads have been joined
[2025-02-24 03:37:25] 2025-02-24 08:37:11,310 | INFO     | [job] control thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:11,325 | INFO     | [job] job monitor thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:11,326 | INFO     | [job] retrieve thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:11,326 | INFO     | [job] queue monitor thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:11,606 | INFO     | [job] validate thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:11,612 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:11,628 | INFO     | [data] copytool_in thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:11,766 | INFO     | [data] control thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:11,767 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:11,817 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:11,915 | INFO     | [payload] failed_post thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:11,990 | INFO     | all payload control threads have been joined
[2025-02-24 03:37:25] 2025-02-24 08:37:12,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 03:37:25] 2025-02-24 08:37:12,373 | INFO     | [data] copytool_out thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:12,445 | INFO     | [payload] validate_post thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:12,532 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:12,769 | INFO     | PID=3869117 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-24 03:37:25] 2025-02-24 08:37:12,769 | INFO     | .. there are 82 such processes running
[2025-02-24 03:37:25] 2025-02-24 08:37:12,770 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 03:37:25] 2025-02-24 08:37:12,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 03:37:25] 2025-02-24 08:37:12,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 03:37:25] 2025-02-24 08:37:12,996 | INFO     | [payload] control thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:16,171 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 03:37:25] 2025-02-24 08:37:16,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139704332883776)>', '<ExcThread(monitor, started 139703332366080)>']
[2025-02-24 03:37:25] 2025-02-24 08:37:16,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 03:37:25] 2025-02-24 08:37:16,793 | INFO     | [monitor] control thread has ended
[2025-02-24 03:37:25] 2025-02-24 08:37:21,792 | INFO     | all workflow threads have been joined
[2025-02-24 03:37:25] 2025-02-24 08:37:21,792 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 03:37:25] 2025-02-24 08:37:21,796 | INFO     | traces error code: 0
[2025-02-24 03:37:25] 2025-02-24 08:37:21,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 03:37:25] 2025-02-24 08:37:23,805 [wrapper] ==== pilot stdout END ====
[2025-02-24 03:37:25] 2025-02-24 08:37:23,871 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 03:37:25] 2025-02-24 08:37:23,911 [wrapper] pilotpid: 3869117
[2025-02-24 03:37:25] 2025-02-24 08:37:23,967 [wrapper] Pilot exit status: 0
[2025-02-24 03:37:25] 2025-02-24 08:37:24,038 [wrapper] pandaids: 6523634175
[2025-02-24 03:37:25] 2025-02-24 08:37:24,364 [wrapper] cleanup supervisor_pilot 1899263 3869118
[2025-02-24 03:37:25] 2025-02-24 08:37:24,373 [wrapper] Test setup, not cleaning
[2025-02-24 03:37:25] 2025-02-24 08:37:24,403 [wrapper] apfmon messages muted
[2025-02-24 03:37:25] 2025-02-24 08:37:24,435 [wrapper] ==== wrapper stdout END ====
[2025-02-24 03:37:25] 2025-02-24 08:37:24,458 [wrapper] ==== wrapper stderr END ====
[2025-02-24 03:37:25]  *** Error codes and diagnostics ***
[2025-02-24 03:37:25]     "exeErrorCode": 0,
[2025-02-24 03:37:25]     "exeErrorDiag": "",
[2025-02-24 03:37:25]     "pilotErrorCode": 0,
[2025-02-24 03:37:25]     "pilotErrorDiag": "",
[2025-02-24 03:37:25]  *** Listing of results directory ***
[2025-02-24 03:37:25] total 675728
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas      5118 Feb 22 21:53 queuedata.json
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas    491065 Feb 22 21:55 pilot3.tar.gz
[2025-02-24 03:37:25] -rwx------. 1 boincer umatlas     35865 Feb 22 21:56 runpilot2-wrapper.sh
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas       100 Feb 23 10:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 03:37:25] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 23 10:36 run_atlas
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas       105 Feb 23 10:36 job.xml
[2025-02-24 03:37:25] -rw-r--r--. 2 boincer umatlas 345754385 Feb 23 10:36 EVNT.43092757._001881.pool.root.1
[2025-02-24 03:37:25] -rw-r--r--. 2 boincer umatlas    503559 Feb 23 10:36 input.tar.gz
[2025-02-24 03:37:25] -rw-r--r--. 2 boincer umatlas     17569 Feb 23 10:36 start_atlas.sh
[2025-02-24 03:37:25] drwxrwx--x. 2 boincer umatlas      4096 Feb 23 10:36 shared
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas         0 Feb 23 10:36 boinc_lockfile
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas      2548 Feb 23 10:36 pandaJob.out
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas       467 Feb 23 10:36 setup.sh.local
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas    987744 Feb 23 10:37 agis_schedconf.cvmfs.json
[2025-02-24 03:37:25] drwx------. 4 boincer umatlas      4096 Feb 23 10:38 pilot3
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas 325886468 Feb 24 03:33 HITS.43205094._037746.pool.root.1
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas       533 Feb 24 03:33 boinc_task_state.xml
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas      1057 Feb 24 03:36 memory_monitor_summary.json
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas   1582569 Feb 24 03:36 agis_ddmendpoints.agis.ALL.json
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas    956347 Feb 24 03:36 log.43205094._037746.job.log.tgz.1
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas        95 Feb 24 03:36 pilot_heartbeat.json
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas      7740 Feb 24 03:37 heartbeat.json
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas      6839 Feb 24 03:37 init_data.xml
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas      4610 Feb 24 03:37 pilotlog.txt
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas      8192 Feb 24 03:37 boinc_mmap_file
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas        29 Feb 24 03:37 wrapper_checkpoint.txt
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas   7292358 Feb 24 03:37 log.43205094._037746.job.log.1
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas       357 Feb 24 03:37 output.list
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas       620 Feb 24 03:37 runtime_log
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas   8263680 Feb 24 03:37 result.tar.gz
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas     11404 Feb 24 03:37 runtime_log.err
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas       657 Feb 24 03:37 4lWMDmGLH66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmTwuKDmxpyJDn.diag
[2025-02-24 03:37:25] -rw-r--r--. 1 boincer umatlas     21824 Feb 24 03:37 stderr.txt
[2025-02-24 03:37:25] HITS file was successfully produced:
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas 325886468 Feb 24 03:33 shared/HITS.pool.root.1
[2025-02-24 03:37:25]  *** Contents of shared directory: ***
[2025-02-24 03:37:25] total 664496
[2025-02-24 03:37:25] -rw-r--r--. 2 boincer umatlas 345754385 Feb 23 10:36 ATLAS.root_0
[2025-02-24 03:37:25] -rw-r--r--. 2 boincer umatlas    503559 Feb 23 10:36 input.tar.gz
[2025-02-24 03:37:25] -rw-r--r--. 2 boincer umatlas     17569 Feb 23 10:36 start_atlas.sh
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas 325886468 Feb 24 03:33 HITS.pool.root.1
[2025-02-24 03:37:25] -rw-------. 1 boincer umatlas   8263680 Feb 24 03:37 result.tar.gz
03:37:26 (3849890): run_atlas exited; CPU time 100165.410156
03:37:26 (3849890): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN