Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 21:11:04 (270846): Detected: vboxwrapper 26206
2025-02-23 21:11:04 (270846): Detected: BOINC client v7.24.1
2025-02-23 21:11:05 (270846): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-02-23 21:11:05 (270846): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 21:11:05 (270846): Create VM. (boinc_5a11cee8cd23ed19, slot#0)
2025-02-23 21:11:05 (270846): Setting Memory Size for VM. (4800MB)
2025-02-23 21:11:05 (270846): Setting CPU Count for VM. (8)
2025-02-23 21:11:05 (270846): Setting Chipset Options for VM.
2025-02-23 21:11:05 (270846): Setting Graphics Controller Options for VM.
2025-02-23 21:11:05 (270846): Setting Boot Options for VM.
2025-02-23 21:11:05 (270846): Setting Network Configuration for NAT.
2025-02-23 21:11:05 (270846): Enabling VM Network Access.
2025-02-23 21:11:05 (270846): Disabling USB Support for VM.
2025-02-23 21:11:05 (270846): Disabling COM Port Support for VM.
2025-02-23 21:11:05 (270846): Disabling LPT Port Support for VM.
2025-02-23 21:11:05 (270846): Disabling Audio Support for VM.
2025-02-23 21:11:05 (270846): Disabling Clipboard Support for VM.
2025-02-23 21:11:06 (270846): Disabling Drag and Drop Support for VM.
2025-02-23 21:11:06 (270846): Adding storage controller(s) to VM.
2025-02-23 21:11:06 (270846): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 21:11:07 (270846): Adding VirtualBox Guest Additions to VM.
2025-02-23 21:11:07 (270846): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 21:11:07 (270846): forwarding host port 42169 to guest port 80
2025-02-23 21:11:07 (270846): Enabling remote desktop for VM.
2025-02-23 21:11:07 (270846): Enabling shared directory for VM.
2025-02-23 21:11:07 (270846): Starting VM using VBoxManage interface. (boinc_5a11cee8cd23ed19, slot#0)
2025-02-23 21:11:09 (270846): Successfully started VM. (PID = '271338')
2025-02-23 21:11:09 (270846): Reporting VM Process ID to BOINC.
2025-02-23 21:11:09 (270846): Guest Log: BIOS: VirtualBox 7.0.16
2025-02-23 21:11:09 (270846): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 21:11:09 (270846): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 21:11:09 (270846): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 21:11:09 (270846): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 21:11:09 (270846): Detected: Web Application Enabled (http://localhost:42169)
2025-02-23 21:11:09 (270846): Detected: Remote Desktop Enabled (localhost:58301)
2025-02-23 21:11:09 (270846): Preference change detected
2025-02-23 21:11:09 (270846): Setting CPU throttle for VM. (100%)
2025-02-23 21:11:09 (270846): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 21:11:11 (270846): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 21:11:11 (270846): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 21:11:13 (270846): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 21:11:13 (270846): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 21:11:13 (270846): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 21:11:22 (270846): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 21:11:22 (270846): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 21:11:25 (270846): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 21:11:25 (270846): Guest Log: 00:00:00.000104 main     Log opened 2025-02-23T19:11:24.432134000Z
2025-02-23 21:11:25 (270846): Guest Log: 00:00:00.000203 main     OS Product: Linux
2025-02-23 21:11:25 (270846): Guest Log: 00:00:00.000231 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 21:11:25 (270846): Guest Log: 00:00:00.000255 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 21:11:25 (270846): Guest Log: 00:00:00.000300 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 21:11:25 (270846): Guest Log: 00:00:00.000300 main     Process ID: 1366
2025-02-23 21:11:25 (270846): Guest Log: 00:00:00.000301 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 21:11:25 (270846): Guest Log: 00:00:00.000945 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 21:11:25 (270846): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 21:11:25 (270846): Guest Log: [INFO] Mounting shared directory
2025-02-23 21:11:25 (270846): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 21:11:32 (270846): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 21:11:32 (270846): Guest Log: [INFO] Detected branch: prod
2025-02-23 21:11:32 (270846): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 21:11:32 (270846): Guest Log: Copying input files
2025-02-23 21:11:33 (270846): Guest Log: Copied input files into RunAtlas.
2025-02-23 21:11:33 (270846): Guest Log: Detected user-configured HTTP proxy at http://proxy:3128 - will set in /etc/cvmfs/default.local
2025-02-23 21:11:50 (270846): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 21:11:50 (270846): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 21:11:50 (270846): Guest Log: 2.6.3.0 1641 0 31848 142986 4 1 3119916 4096000 0 65024 0 0 n/a 1168 172 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2025-02-23 21:11:51 (270846): Guest Log: copied the webapp to /var/www
2025-02-23 21:11:51 (270846): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-23 21:11:51 (270846): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-23 21:11:51 (270846): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 21:11:51 (270846): Guest Log:  *** Starting ATLAS job. (PandaID=6523537556 taskID=43078919) ***
2025-02-23 21:16:56 (270846): VM state change detected. (old = 'running', new = 'paused')
2025-02-23 21:17:17 (270846): VM state change detected. (old = 'paused', new = 'running')
2025-02-23 21:25:28 (270846): VM state change detected. (old = 'running', new = 'paused')
2025-02-23 21:25:49 (270846): VM state change detected. (old = 'paused', new = 'running')
2025-02-23 22:35:09 (270846): VM state change detected. (old = 'running', new = 'paused')
2025-02-23 22:35:30 (270846): VM state change detected. (old = 'paused', new = 'running')
2025-02-23 22:38:50 (270846): VM state change detected. (old = 'running', new = 'paused')
2025-02-23 22:39:10 (270846): VM state change detected. (old = 'paused', new = 'running')
2025-02-23 22:51:35 (270846): Status Report: Elapsed Time: '6000.000000'
2025-02-23 22:51:35 (270846): Status Report: CPU Time: '43919.190000'
2025-02-23 23:36:29 (270846): VM state change detected. (old = 'running', new = 'paused')
2025-02-23 23:36:50 (270846): VM state change detected. (old = 'paused', new = 'running')
2025-02-23 23:39:05 (270846): Guest Log:  *** Job finished ***
2025-02-23 23:39:05 (270846): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:12,953 | INFO     | [data] copytool_in thread has finished
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:14,197 | INFO     | [data] copytool_out thread has finished
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:16,544 | INFO     | [data] queue_monitor thread has finished
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:16,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796993218368)>', '<ExcThread(monitor, started 139796768487168)>']
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:17,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:17,579 | INFO     | [monitor] control thread has ended
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,366 | INFO     | all workflow threads have been joined
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,366 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,367 | INFO     | traces error code: 0
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,367 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,447 [wrapper] ==== pilot stdout END ====
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,451 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,455 [wrapper] pilotpid: 6003
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,460 [wrapper] Pilot exit status: 0
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,495 [wrapper] pandaids: 6523537556
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,529 [wrapper] cleanup supervisor_pilot  8726 6004
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,535 [wrapper] Test setup, not cleaning
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,543 [wrapper] apfmon messages muted
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,546 [wrapper] ==== wrapper stdout END ====
2025-02-23 23:39:05 (270846): Guest Log: 2025-02-23 21:37:22,549 [wrapper] ==== wrapper stderr END ====
2025-02-23 23:39:05 (270846): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 23:39:05 (270846): Guest Log:     "exeErrorCode": 0,
2025-02-23 23:39:05 (270846): Guest Log:     "exeErrorDiag": "",
2025-02-23 23:39:05 (270846): Guest Log:     "pilotErrorCode": 0,
2025-02-23 23:39:05 (270846): Guest Log:     "pilotErrorDiag": "",
2025-02-23 23:39:05 (270846): Guest Log:  *** Listing of results directory ***
2025-02-23 23:39:05 (270846): Guest Log: total 320040
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 23 01:31 pilot3.tar.gz
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 02:06 queuedata.json
2025-02-23 23:39:05 (270846): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 02:07 runpilot2-wrapper.sh
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 atlas atlas    503559 Feb 23 19:11 input.tar.gz
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 atlas atlas      6920 Feb 23 19:11 init_data.xml
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb 23 19:11 start_atlas.sh
2025-02-23 23:39:05 (270846): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 23 19:11 EVNT.43078917._001995.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Feb 23 19:11 pandaJob.out
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas       452 Feb 23 19:11 setup.sh.local
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas    987744 Feb 23 19:12 agis_schedconf.cvmfs.json
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 23 19:12 agis_ddmendpoints.agis.ALL.json
2025-02-23 23:39:05 (270846): Guest Log: drwx------. 4 atlas atlas      4096 Feb 23 19:12 pilot3
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas        95 Feb 23 21:36 pilot_heartbeat.json
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas 321912637 Feb 23 21:36 HITS.43078919._090296.pool.root.1
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas      1029 Feb 23 21:36 memory_monitor_summary.json
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas    332252 Feb 23 21:37 log.43078919._090296.job.log.tgz.1
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas      7734 Feb 23 21:37 heartbeat.json
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 23 21:37 pilotlog.txt
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas    707045 Feb 23 21:37 log.43078919._090296.job.log.1
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas       357 Feb 23 21:37 output.list
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 23 21:37 runtime_log
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas   1054720 Feb 23 21:37 result.tar.gz
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 atlas atlas     11232 Feb 23 21:37 runtime_log.err
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas       648 Feb 23 21:37 9dxLDmTaG66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmQtuKDm0EksYn.diag
2025-02-23 23:39:05 (270846): Guest Log: Looking for outputfile HITS.43078919._090296.pool.root.1
2025-02-23 23:39:05 (270846): Guest Log: HITS file was successfully produced
2025-02-23 23:39:05 (270846): Guest Log: -rw-------. 1 atlas atlas 321912637 Feb 23 21:36 /home/atlas/RunAtlas/HITS.43078919._090296.pool.root.1
2025-02-23 23:39:05 (270846): Guest Log: Successfully finished the ATLAS job!
2025-02-23 23:39:05 (270846): Guest Log: Copying the results back to the shared directory!
2025-02-23 23:39:05 (270846): Guest Log:  *** Contents of shared directory: ***
2025-02-23 23:39:05 (270846): Guest Log: total 334721
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 root root 342018965 Feb 23 19:11 ATLAS.root_0
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 root root      6920 Feb 23 19:11 init_data.xml
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 root root    503559 Feb 23 19:11 input.tar.gz
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 root root   1054720 Feb 23  2025 result.tar.gz
2025-02-23 23:39:05 (270846): Guest Log: -rw-r--r--. 1 root root     17569 Feb 23 19:11 start_atlas.sh
2025-02-23 23:39:05 (270846): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 23:39:05 (270846): VM Completion File Detected.
2025-02-23 23:39:05 (270846): Powering off VM.
2025-02-23 23:39:05 (270846): Successfully stopped VM.
2025-02-23 23:39:05 (270846): Deregistering VM. (boinc_5a11cee8cd23ed19, slot#0)
2025-02-23 23:39:06 (270846): Removing network bandwidth throttle group from VM.
2025-02-23 23:39:06 (270846): Removing VM from VirtualBox.
23:39:11 (270846): called boinc_finish(0)

</stderr_txt>
]]>

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