Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:17:07 (4941): wrapper (7.7.26015): starting
14:17:07 (4941): wrapper: running run_atlas (--nthreads 12)
[2025-02-23 14:17:07] Arguments: --nthreads 12
[2025-02-23 14:17:07] Threads: 12
[2025-02-23 14:17:07] Checking for CVMFS
[2025-02-23 14:17:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-23 14:17:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-23 14:17:07] Running cvmfs_config stat atlas.cern.ch
[2025-02-23 14:17:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-23 14:17:08] 2.11.2.0 13457 1665 82072 142977 1 15 23377765 25165825 0 130560 0 17355071 99.993 494477 8511 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-02-23 14:17:08] CVMFS is ok
[2025-02-23 14:17:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 14:17:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 14:17:08] Further information can be found at the LHC@home message board.
[2025-02-23 14:17:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 14:17:08] Checking for apptainer binary...
[2025-02-23 14:17:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-23 14:17:08] Running /usr/bin/apptainer --version
[2025-02-23 14:17:08] apptainer version 1.3.2-1.el7
[2025-02-23 14:17:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 14:17:12] cg-vwn116.simple-grid.lan
[2025-02-23 14:17:12] apptainer works
[2025-02-23 14:17:12] Set ATHENA_PROC_NUMBER=12
[2025-02-23 14:17:12] Set ATHENA_CORE_NUMBER=12
[2025-02-23 14:17:13] Starting ATLAS job with PandaID=6523440185
[2025-02-23 14:17:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 14:26:07]  *** The last 200 lines of the pilot log: ***
[2025-02-23 14:26:07] 2025-02-23 13:25:53,506 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-23 14:26:07] 2025-02-23 13:25:55,350 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-23 14:26:07] 2025-02-23 13:25:55,351 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6523440185/memory_monitor_output.txt
[2025-02-23 14:26:07] 2025-02-23 13:25:55,352 | INFO     | memory summary dictionary not yet available
[2025-02-23 14:26:07] 2025-02-23 13:25:55,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-23 14:26:07] 2025-02-23 13:25:55,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-23 14:26:07] 2025-02-23 13:25:55,355 | INFO     | ..............................
[2025-02-23 14:26:07] 2025-02-23 13:25:55,355 | INFO     | . Timing measurements:
[2025-02-23 14:26:07] 2025-02-23 13:25:55,356 | INFO     | . get job = 0 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,356 | INFO     | . initial setup = 2 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,356 | INFO     | . payload setup = 23 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,357 | INFO     | . stage-in = 0 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,357 | INFO     | . payload execution = 230 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,357 | INFO     | . stage-out = 0 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,358 | INFO     | . log creation = 0 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,358 | INFO     | ..............................
[2025-02-23 14:26:07] 2025-02-23 13:25:55,358 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-23 14:26:07] 2025-02-23 13:25:55,359 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6523440185/pilotlog.txt
[2025-02-23 14:26:07] 2025-02-23 13:25:55,418 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-02-23 14:26:07] - Log from pilotlog.txt -
[2025-02-23 14:26:07] 2025-02-23 13:25:51,001 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-23 14:26:07] 2025-02-23 13:25:53,505 | INFO     | monitor loop #144: job 0:6523440185 is in state 'failed'
[2025-02-23 14:26:07] 2025-02-23 13:25:53,506 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-23 14:26:07] 2025-02-23 13:25:55,350 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-23 14:26:07] 2025-02-23 13:25:55,351 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6523440185/memory_monitor_output.txt
[2025-02-23 14:26:07] 2025-02-23 13:25:55,352 | INFO     | memory summary dictionary not yet available
[2025-02-23 14:26:07] 2025-02-23 13:25:55,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-23 14:26:07] 2025-02-23 13:25:55,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-23 14:26:07] 2025-02-23 13:25:55,355 | INFO     | ..............................
[2025-02-23 14:26:07] 2025-02-23 13:25:55,355 | INFO     | . Timing measurements:
[2025-02-23 14:26:07] 2025-02-23 13:25:55,356 | INFO     | . get job = 0 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,356 | INFO     | . initial setup = 2 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,356 | INFO     | . payload setup = 23 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,357 | INFO     | . stage-in = 0 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,357 | INFO     | . payload execution = 230 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,357 | INFO     | . stage-out = 0 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,358 | INFO     | . log creation = 0 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,358 | INFO     | ..............................
[2025-02-23 14:26:07] 2025-02-23 13:25:55,358 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-23 14:26:07] 2025-02-23 13:25:55,359 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6523440185/pilotlog.txt
[2025-02-23 14:26:07] 2025-02-23 13:25:55,419 | WARNING  | 
[2025-02-23 14:26:07] [begin log extracts]
[2025-02-23 14:26:07] - Log from pilotlog.txt -
[2025-02-23 14:26:07] 2025-02-23 13:25:51,001 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-23 14:26:07] 2025-02-23 13:25:53,505 | INFO     | monitor loop #144: job 0:6523440185 is in state 'failed'
[2025-02-23 14:26:07] 2025-02-23 13:25:53,506 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-23 14:26:07] 2025-02-23 13:25:55,350 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-23 14:26:07] 2025-02-23 13:25:55,351 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6523440185/memory_monitor_output.txt
[2025-02-23 14:26:07] 2025-02-23 13:25:55,352 | INFO     | memory summary dictionary not yet available
[2025-02-23 14:26:07] 2025-02-23 13:25:55,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-23 14:26:07] 2025-02-23 13:25:55,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-23 14:26:07] 2025-02-23 13:25:55,355 | INFO     | ..............................
[2025-02-23 14:26:07] 2025-02-23 13:25:55,355 | INFO     | . Timing measurements:
[2025-02-23 14:26:07] 2025-02-23 13:25:55,356 | INFO     | . get job = 0 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,356 | INFO     | . initial setup = 2 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,356 | INFO     | . payload setup = 23 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,357 | INFO     | . stage-in = 0 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,357 | INFO     | . payload execution = 230 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,357 | INFO     | . stage-out = 0 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,358 | INFO     | . log creation = 0 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,358 | INFO     | ..............................
[2025-02-23 14:26:07] 2025-02-23 13:25:55,358 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-23 14:26:07] 2025-02-23 13:25:55,359 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6523440185/pilotlog.txt
[2025-02-23 14:26:07] [end log extracts]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,420 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-02-23 14:26:07] 2025-02-23 13:25:55,420 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 13:22:33,462 CRITICAL Transform executor raised TransformValidationExcep
[2025-02-23 14:26:07] 2025-02-23 13:25:55,761 | INFO     | 
[2025-02-23 14:26:07] 2025-02-23 13:25:55,762 | INFO     | job summary report
[2025-02-23 14:26:07] 2025-02-23 13:25:55,762 | INFO     | --------------------------------------------------
[2025-02-23 14:26:07] 2025-02-23 13:25:55,762 | INFO     | PanDA job id: 6523440185
[2025-02-23 14:26:07] 2025-02-23 13:25:55,763 | INFO     | task id: 43205094
[2025-02-23 14:26:07] 2025-02-23 13:25:55,763 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 13:22:33,462 CRITICAL Transform executor raised TransformValidationExceptio
[2025-02-23 14:26:07] 2025-02-23 13:25:55,763 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 14:26:07] 2025-02-23 13:25:55,764 | INFO     | pilot state: failed 
[2025-02-23 14:26:07] 2025-02-23 13:25:55,764 | INFO     | transexitcode: 65
[2025-02-23 14:26:07] 2025-02-23 13:25:55,764 | INFO     | exeerrorcode: 65
[2025-02-23 14:26:07] 2025-02-23 13:25:55,765 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-02-23 14:26:07] 2025-02-23 13:25:55,765 | INFO     | exitcode: 65
[2025-02-23 14:26:07] 2025-02-23 13:25:55,765 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-02-23 14:26:07] 2025-02-23 13:25:55,766 | INFO     | cpuconsumptiontime: 258 s
[2025-02-23 14:26:07] 2025-02-23 13:25:55,766 | INFO     | nevents: 0
[2025-02-23 14:26:07] 2025-02-23 13:25:55,766 | INFO     | neventsw: 0
[2025-02-23 14:26:07] 2025-02-23 13:25:55,766 | INFO     | pid: 15111
[2025-02-23 14:26:07] 2025-02-23 13:25:55,767 | INFO     | pgrp: 15111
[2025-02-23 14:26:07] 2025-02-23 13:25:55,767 | INFO     | corecount: 12
[2025-02-23 14:26:07] 2025-02-23 13:25:55,767 | INFO     | event service: False
[2025-02-23 14:26:07] 2025-02-23 13:25:55,768 | INFO     | sizes: {0: 2383139, 1: 2383338, 2: 2383366, 13: 2383366, 16: 2383628, 23: 2383656, 318: 2407180, 319: 2411418, 320: 2411474, 451: 2411644}
[2025-02-23 14:26:07] 2025-02-23 13:25:55,768 | INFO     | --------------------------------------------------
[2025-02-23 14:26:07] 2025-02-23 13:25:55,768 | INFO     | 
[2025-02-23 14:26:07] 2025-02-23 13:25:55,769 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-02-23 14:26:07] 2025-02-23 13:25:55,860 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,861 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,862 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,863 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,863 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,864 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,867 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,867 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,867 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,868 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 14:26:07] 2025-02-23 13:25:55,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,869 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 14:26:07] 2025-02-23 13:25:55,869 | INFO     | job 6523440185 has completed (purged errors)
[2025-02-23 14:26:07] 2025-02-23 13:25:55,870 | INFO     | overall cleanup function is called
[2025-02-23 14:26:07] 2025-02-23 13:25:55,879 | INFO     | 491s have passed since pilot start
[2025-02-23 14:26:07] 2025-02-23 13:25:56,880 | INFO     | --- collectZombieJob: --- 10, [15111]
[2025-02-23 14:26:07] 2025-02-23 13:25:56,880 | INFO     | zombie collector waiting for pid 15111
[2025-02-23 14:26:07] 2025-02-23 13:25:56,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 14:26:07] 2025-02-23 13:25:56,881 | INFO     | collected zombie processes
[2025-02-23 14:26:07] 2025-02-23 13:25:56,881 | INFO     | will attempt to kill all subprocesses of pid=15111
[2025-02-23 14:26:07] 2025-02-23 13:25:57,051 | INFO     | process IDs to be killed: [15111] (in reverse order)
[2025-02-23 14:26:07] 2025-02-23 13:25:57,113 | INFO     | PID=8598 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-02-23 14:26:07] 2025-02-23 13:25:57,195 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 14:26:07] 2025-02-23 13:25:57,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 14:26:07] 2025-02-23 13:25:57,202 | INFO     | did not find any defunct processes belonging to 15111
[2025-02-23 14:26:07] 2025-02-23 13:25:57,209 | INFO     | did not find any defunct processes belonging to 15111
[2025-02-23 14:26:07] 2025-02-23 13:25:57,210 | INFO     | ready for new job
[2025-02-23 14:26:07] 2025-02-23 13:25:57,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 14:26:07] 2025-02-23 13:25:57,214 | INFO     | **************************************
[2025-02-23 14:26:07] 2025-02-23 13:25:57,214 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 14:26:07] 2025-02-23 13:25:57,215 | INFO     | **************************************
[2025-02-23 14:26:07] 2025-02-23 13:25:57,215 | INFO     | 
[2025-02-23 14:26:07] 2025-02-23 13:25:57,217 | INFO     | pilot is running in a VM
[2025-02-23 14:26:07] 2025-02-23 13:25:57,217 | INFO     | architecture information:
[2025-02-23 14:26:07] 2025-02-23 13:25:57,219 | INFO     | executing command: cat /etc/os-release
[2025-02-23 14:26:07] 2025-02-23 13:25:57,282 | INFO     | cat /etc/os-release:
[2025-02-23 14:26:07] NAME="CentOS Linux"
[2025-02-23 14:26:07] VERSION="7 (Core)"
[2025-02-23 14:26:07] ID="centos"
[2025-02-23 14:26:07] ID_LIKE="rhel fedora"
[2025-02-23 14:26:07] VERSION_ID="7"
[2025-02-23 14:26:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 14:26:07] ANSI_COLOR="0;31"
[2025-02-23 14:26:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 14:26:07] HOME_URL="https://www.centos.org/"
[2025-02-23 14:26:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 14:26:07] 
[2025-02-23 14:26:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 14:26:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 14:26:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 14:26:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 14:26:07] 
[2025-02-23 14:26:07] 2025-02-23 13:25:57,283 | INFO     | **************************************
[2025-02-23 14:26:07] 2025-02-23 13:25:57,787 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-02-23 14:26:07] 2025-02-23 13:25:57,853 | INFO     | sufficient remaining disk space (255675334656 B)
[2025-02-23 14:26:07] 2025-02-23 13:25:57,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 14:26:07] 2025-02-23 13:25:57,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 14:26:07] 2025-02-23 13:25:57,855 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-23 14:26:07] 2025-02-23 13:25:57,857 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 14:26:07] 2025-02-23 13:25:57,858 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 14:26:07] 2025-02-23 13:25:57,858 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 14:26:07] 2025-02-23 13:25:57,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 14:26:07] 2025-02-23 13:25:57,860 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 14:26:07] 2025-02-23 13:25:57,861 | INFO     | aborting loop
[2025-02-23 14:26:07] 2025-02-23 13:25:57,862 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 14:26:07] 2025-02-23 13:25:58,412 | INFO     | all payload control threads have been joined
[2025-02-23 14:26:07] 2025-02-23 13:25:58,743 | INFO     | all data control threads have been joined
[2025-02-23 14:26:07] 2025-02-23 13:25:58,861 | INFO     | [job] retrieve thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:25:58,868 | INFO     | [job] job monitor thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:25:59,164 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:25:59,247 | INFO     | all job control threads have been joined
[2025-02-23 14:26:07] 2025-02-23 13:25:59,261 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:25:59,372 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:25:59,419 | INFO     | [payload] control thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:25:59,558 | INFO     | [data] copytool_in thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:25:59,749 | INFO     | [data] control thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:25:59,782 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:25:59,825 | INFO     | [payload] validate_post thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:25:59,866 | INFO     | [data] copytool_out thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:25:59,937 | INFO     | [job] validate thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:26:00,253 | INFO     | [job] control thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:26:00,426 | INFO     | [payload] failed_post thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:26:00,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 14:26:07] 2025-02-23 13:26:01,623 | INFO     | [job] queue monitor thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:26:01,869 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 14:26:07] 2025-02-23 13:26:02,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140327249459008)>', '<ExcThread(monitor, started 140326354274048)>']
[2025-02-23 14:26:07] 2025-02-23 13:26:02,885 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 14:26:07] 2025-02-23 13:26:02,886 | INFO     | [monitor] control thread has ended
[2025-02-23 14:26:07] 2025-02-23 13:26:07,014 | INFO     | all workflow threads have been joined
[2025-02-23 14:26:07] 2025-02-23 13:26:07,015 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 14:26:07] 2025-02-23 13:26:07,016 | INFO     | traces error code: 0
[2025-02-23 14:26:07] 2025-02-23 13:26:07,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 14:26:07] 2025-02-23 13:26:07,269 [wrapper] ==== pilot stdout END ====
[2025-02-23 14:26:07] 2025-02-23 13:26:07,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 14:26:07] 2025-02-23 13:26:07,290 [wrapper] pilotpid: 8598
[2025-02-23 14:26:07] 2025-02-23 13:26:07,301 [wrapper] Pilot exit status: 0
[2025-02-23 14:26:07] 2025-02-23 13:26:07,349 [wrapper] pandaids: 6523440185
[2025-02-23 14:26:07] 2025-02-23 13:26:07,448 [wrapper] cleanup supervisor_pilot  8604 8599
[2025-02-23 14:26:07] 2025-02-23 13:26:07,460 [wrapper] Test setup, not cleaning
[2025-02-23 14:26:07] 2025-02-23 13:26:07,486 [wrapper] apfmon messages muted
[2025-02-23 14:26:07] 2025-02-23 13:26:07,498 [wrapper] ==== wrapper stdout END ====
[2025-02-23 14:26:07] 2025-02-23 13:26:07,510 [wrapper] ==== wrapper stderr END ====
[2025-02-23 14:26:07]  *** Error codes and diagnostics ***
[2025-02-23 14:26:07]     "exeErrorCode": 65,
[2025-02-23 14:26:07]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-02-23 14:26:07]     "pilotErrorCode": 1305,
[2025-02-23 14:26:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 13:22:33,462 CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-02-23 14:26:07]  *** Listing of results directory ***
[2025-02-23 14:26:07] total 337776
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc    491065 Feb 22 23:40 pilot3.tar.gz
[2025-02-23 14:26:07] -rwx------. 1 boinc boinc     35865 Feb 22 23:58 runpilot2-wrapper.sh
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc      5118 Feb 22 23:58 queuedata.json
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc       100 Feb 23 14:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 14:26:07] -rwxr-xr-x. 1 boinc boinc      7986 Feb 23 14:17 run_atlas
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc       105 Feb 23 14:17 job.xml
[2025-02-23 14:26:07] -rw-r--r--. 2 boinc boinc 341701477 Feb 23 14:17 EVNT.43092757._001860.pool.root.1
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc      6119 Feb 23 14:17 init_data.xml
[2025-02-23 14:26:07] -rw-r--r--. 2 boinc boinc    503563 Feb 23 14:17 input.tar.gz
[2025-02-23 14:26:07] -rw-r--r--. 2 boinc boinc     17569 Feb 23 14:17 start_atlas.sh
[2025-02-23 14:26:07] drwxrwx--x. 2 boinc boinc        68 Feb 23 14:17 shared
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc         0 Feb 23 14:17 boinc_lockfile
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc      2548 Feb 23 14:17 pandaJob.out
[2025-02-23 14:26:07] -rw-------. 1 boinc boinc       424 Feb 23 14:17 setup.sh.local
[2025-02-23 14:26:07] -rw-------. 1 boinc boinc    987736 Feb 23 14:17 agis_schedconf.cvmfs.json
[2025-02-23 14:26:07] -rw-------. 1 boinc boinc   1582569 Feb 23 14:17 agis_ddmendpoints.agis.ALL.json
[2025-02-23 14:26:07] drwx------. 4 boinc boinc      4096 Feb 23 14:17 pilot3
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc       525 Feb 23 14:22 boinc_task_state.xml
[2025-02-23 14:26:07] -rw-------. 1 boinc boinc     48092 Feb 23 14:23 log.43205094._037594.job.log.tgz.1
[2025-02-23 14:26:07] -rw-------. 1 boinc boinc        95 Feb 23 14:25 pilot_heartbeat.json
[2025-02-23 14:26:07] -rw-------. 1 boinc boinc      8063 Feb 23 14:25 heartbeat.json
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc      8192 Feb 23 14:26 boinc_mmap_file
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc        24 Feb 23 14:26 wrapper_checkpoint.txt
[2025-02-23 14:26:07] -rw-------. 1 boinc boinc      4401 Feb 23 14:26 pilotlog.txt
[2025-02-23 14:26:07] -rw-------. 1 boinc boinc    150729 Feb 23 14:26 log.43205094._037594.job.log.1
[2025-02-23 14:26:07] -rw-------. 1 boinc boinc       188 Feb 23 14:26 output.list
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc       620 Feb 23 14:26 runtime_log
[2025-02-23 14:26:07] -rw-------. 1 boinc boinc    215040 Feb 23 14:26 result.tar.gz
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc     10861 Feb 23 14:26 runtime_log.err
[2025-02-23 14:26:07] -rw-------. 1 boinc boinc       643 Feb 23 14:26 QEXKDmCdD66n9Rq4apOajLDm4fhM0noT9bVoFjIUDmXZeKDmrvwG5m.diag
[2025-02-23 14:26:07] -rw-r--r--. 1 boinc boinc     21933 Feb 23 14:26 stderr.txt
[2025-02-23 14:26:07] No HITS result produced
[2025-02-23 14:26:07]  *** Contents of shared directory: ***
[2025-02-23 14:26:07] total 334420
[2025-02-23 14:26:07] -rw-r--r--. 2 boinc boinc 341701477 Feb 23 14:17 ATLAS.root_0
[2025-02-23 14:26:07] -rw-r--r--. 2 boinc boinc    503563 Feb 23 14:17 input.tar.gz
[2025-02-23 14:26:07] -rw-r--r--. 2 boinc boinc     17569 Feb 23 14:17 start_atlas.sh
[2025-02-23 14:26:07] -rw-------. 1 boinc boinc    215040 Feb 23 14:26 result.tar.gz
14:26:09 (4941): run_atlas exited; CPU time 198.944154
14:26:09 (4941): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN