Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 23:02:33 (18308): Detected: vboxwrapper 26206
2025-02-23 23:02:33 (18308): Detected: BOINC client v8.0.2
2025-02-23 23:02:34 (18308): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-23 23:02:34 (18308): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 23:02:35 (18308): Create VM. (boinc_73b7f2284cd715a7, slot#11)
2025-02-23 23:02:35 (18308): Setting Memory Size for VM. (4200MB)
2025-02-23 23:02:35 (18308): Setting CPU Count for VM. (2)
2025-02-23 23:02:36 (18308): Setting Chipset Options for VM.
2025-02-23 23:02:36 (18308): Setting Graphics Controller Options for VM.
2025-02-23 23:02:36 (18308): Setting Boot Options for VM.
2025-02-23 23:02:37 (18308): Setting Network Configuration for NAT.
2025-02-23 23:02:37 (18308): Enabling VM Network Access.
2025-02-23 23:02:37 (18308): Disabling USB Support for VM.
2025-02-23 23:02:37 (18308): Disabling COM Port Support for VM.
2025-02-23 23:02:38 (18308): Disabling LPT Port Support for VM.
2025-02-23 23:02:38 (18308): Disabling Audio Support for VM.
2025-02-23 23:02:38 (18308): Disabling Clipboard Support for VM.
2025-02-23 23:02:38 (18308): Disabling Drag and Drop Support for VM.
2025-02-23 23:02:39 (18308): Adding storage controller(s) to VM.
2025-02-23 23:02:39 (18308): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 23:02:40 (18308): Adding VirtualBox Guest Additions to VM.
2025-02-23 23:02:40 (18308): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 23:02:40 (18308): forwarding host port 54943 to guest port 80
2025-02-23 23:02:41 (18308): Enabling remote desktop for VM.
2025-02-23 23:02:41 (18308): Required extension pack not installed, remote desktop not enabled.
2025-02-23 23:02:41 (18308): Enabling shared directory for VM.
2025-02-23 23:02:42 (18308): Starting VM using VBoxManage interface. (boinc_73b7f2284cd715a7, slot#11)
2025-02-23 23:02:49 (18308): Successfully started VM. (PID = '17532')
2025-02-23 23:02:49 (18308): Reporting VM Process ID to BOINC.
2025-02-23 23:02:49 (18308): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-23 23:02:49 (18308): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 23:02:49 (18308): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 23:02:49 (18308): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 23:02:49 (18308): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 23:02:49 (18308): Detected: Web Application Enabled (http://localhost:54943)
2025-02-23 23:02:49 (18308): Preference change detected
2025-02-23 23:02:49 (18308): Setting CPU throttle for VM. (100%)
2025-02-23 23:02:49 (18308): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 23:02:51 (18308): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 23:02:51 (18308): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 23:02:53 (18308): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 23:02:53 (18308): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 23:02:53 (18308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 23:02:59 (18308): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 23:02:59 (18308): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 23:03:06 (18308): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 23:03:06 (18308): Guest Log: 00:00:00.000114 main     Log opened 2025-02-23T23:03:04.793348000Z
2025-02-23 23:03:06 (18308): Guest Log: 00:00:00.000195 main     OS Product: Linux
2025-02-23 23:03:06 (18308): Guest Log: 00:00:00.000222 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 23:03:06 (18308): Guest Log: 00:00:00.000243 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 23:03:06 (18308): Guest Log: 00:00:00.000264 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 23:03:06 (18308): Guest Log: 00:00:00.000264 main     Process ID: 1274
2025-02-23 23:03:06 (18308): Guest Log: 00:00:00.000265 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 23:03:06 (18308): Guest Log: 00:00:00.001345 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 23:03:06 (18308): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 23:03:06 (18308): Guest Log: [INFO] Mounting shared directory
2025-02-23 23:03:06 (18308): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 23:03:16 (18308): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 23:03:16 (18308): Guest Log: [INFO] Detected branch: prod
2025-02-23 23:03:16 (18308): Guest Log: 00:00:10.008205 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 588 481 356 000ns (GuestNow=1 740 312 196 319 522 000 ns GuestLast=1 740 351 784 800 878 000 ns fSetTimeLastLoop=true )
2025-02-23 23:03:16 (18308): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 23:03:16 (18308): Guest Log: Copying input files
2025-02-23 23:03:18 (18308): Guest Log: Copied input files into RunAtlas.
2025-02-23 23:03:18 (18308): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 23:03:18 (18308): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 23:03:18 (18308): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 23:03:18 (18308): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 23:03:36 (18308): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 23:03:36 (18308): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 23:03:36 (18308): Guest Log: 2.6.3.0 1552 0 32252 142975 4 1 3119916 4096000 0 65024 0 0 n/a 1169 110 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 23:03:38 (18308): Guest Log: copied the webapp to /var/www
2025-02-23 23:03:38 (18308): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-23 23:03:38 (18308): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-23 23:03:38 (18308): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 23:03:39 (18308): Guest Log:  *** Starting ATLAS job. (PandaID=6523817656 taskID=43205094) ***
2025-02-24 00:49:03 (18308): Status Report: Elapsed Time: '6000.938454'
2025-02-24 00:49:03 (18308): Status Report: CPU Time: '9272.015625'
2025-02-24 02:32:56 (18308): Status Report: Elapsed Time: '12001.166473'
2025-02-24 02:32:56 (18308): Status Report: CPU Time: '21598.078125'
2025-02-24 04:13:54 (18308): Status Report: Elapsed Time: '18001.447981'
2025-02-24 04:13:54 (18308): Status Report: CPU Time: '33538.437500'
2025-02-24 05:55:05 (18308): Status Report: Elapsed Time: '24002.103859'
2025-02-24 05:55:05 (18308): Status Report: CPU Time: '45586.937500'
2025-02-24 07:35:59 (18308): Status Report: Elapsed Time: '30003.023525'
2025-02-24 07:35:59 (18308): Status Report: CPU Time: '57606.187500'
2025-02-24 09:16:57 (18308): Status Report: Elapsed Time: '36003.756586'
2025-02-24 09:16:57 (18308): Status Report: CPU Time: '69642.359375'
2025-02-24 10:57:39 (18308): Status Report: Elapsed Time: '42004.390020'
2025-02-24 10:57:39 (18308): Status Report: CPU Time: '81640.593750'
2025-02-24 12:52:43 (18308): Status Report: Elapsed Time: '48004.657579'
2025-02-24 12:52:43 (18308): Status Report: CPU Time: '95316.843750'
2025-02-24 13:53:55 (18308): Guest Log:  *** Job finished ***
2025-02-24 13:53:55 (18308): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:27,581 | INFO     | [job] validate thread has finished
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:27,829 | INFO     | [data] copytool_out thread has finished
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:29,139 | INFO     | [data] queue_monitor thread has finished
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:30,146 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140683925264192)>', '<ExcThread(monitor, started 140683172103936)>']
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:30,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:30,365 | INFO     | [monitor] control thread has ended
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,152 | INFO     | all workflow threads have been joined
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,152 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,152 | INFO     | traces error code: 0
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,252 [wrapper] ==== pilot stdout END ====
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,256 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,260 [wrapper] pilotpid: 5866
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,263 [wrapper] Pilot exit status: 0
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,748 [wrapper] pandaids: 6523817656
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,774 [wrapper] cleanup supervisor_pilot 10816 5867
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,778 [wrapper] Test setup, not cleaning
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,785 [wrapper] apfmon messages muted
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,789 [wrapper] ==== wrapper stdout END ====
2025-02-24 13:53:55 (18308): Guest Log: 2025-02-24 02:53:35,792 [wrapper] ==== wrapper stderr END ====
2025-02-24 13:53:55 (18308): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 13:53:55 (18308): Guest Log:     "exeErrorCode": 0,
2025-02-24 13:53:55 (18308): Guest Log:     "exeErrorDiag": "",
2025-02-24 13:53:55 (18308): Guest Log:     "pilotErrorCode": 0,
2025-02-24 13:53:55 (18308): Guest Log:     "pilotErrorDiag": "",
2025-02-24 13:53:55 (18308): Guest Log:  *** Listing of results directory ***
2025-02-24 13:53:55 (18308): Guest Log: total 338640
2025-02-24 13:53:55 (18308): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 23 05:42 pilot3.tar.gz
2025-02-24 13:53:55 (18308): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 06:01 runpilot2-wrapper.sh
2025-02-24 13:53:55 (18308): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 06:01 queuedata.json
2025-02-24 13:53:55 (18308): Guest Log: -rwxr-xr-x. 1 atlas atlas      9004 Feb 23 12:03 init_data.xml
2025-02-24 13:53:55 (18308): Guest Log: -rwxr-xr-x. 1 atlas atlas    503554 Feb 23 12:03 input.tar.gz
2025-02-24 13:53:55 (18308): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 23 12:03 start_atlas.sh
2025-02-24 13:53:55 (18308): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 23 12:03 EVNT.43092757._001969.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 13:53:55 (18308): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Feb 23 12:03 pandaJob.out
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas       424 Feb 23 12:03 setup.sh.local
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas    987728 Feb 23 12:06 agis_schedconf.cvmfs.json
2025-02-24 13:53:55 (18308): Guest Log: drwx------. 4 atlas atlas      4096 Feb 23 12:06 pilot3
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas 325909594 Feb 24 02:52 HITS.43205094._038333.pool.root.1
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas      1034 Feb 24 02:52 memory_monitor_summary.json
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 02:52 pilot_heartbeat.json
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 24 02:53 agis_ddmendpoints.agis.ALL.json
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas    792695 Feb 24 02:53 log.43205094._038333.job.log.tgz.1
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas      7707 Feb 24 02:53 heartbeat.json
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas      4461 Feb 24 02:53 pilotlog.txt
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas   7764388 Feb 24 02:53 log.43205094._038333.job.log.1
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 02:53 output.list
2025-02-24 13:53:55 (18308): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 02:53 runtime_log
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas   8581120 Feb 24 02:53 result.tar.gz
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas       669 Feb 24 02:53 ycuNDmlEK66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmh6uKDm6uzKgm.diag
2025-02-24 13:53:55 (18308): Guest Log: -rw-r--r--. 1 atlas atlas     10966 Feb 24 02:53 runtime_log.err
2025-02-24 13:53:55 (18308): Guest Log: Looking for outputfile HITS.43205094._038333.pool.root.1
2025-02-24 13:53:55 (18308): Guest Log: HITS file was successfully produced
2025-02-24 13:53:55 (18308): Guest Log: -rw-------. 1 atlas atlas 325909594 Feb 24 02:52 /home/atlas/RunAtlas/HITS.43205094._038333.pool.root.1
2025-02-24 13:53:55 (18308): Guest Log: Successfully finished the ATLAS job!
2025-02-24 13:53:55 (18308): Guest Log: Copying the results back to the shared directory!
2025-02-24 13:53:56 (18308): Guest Log:  *** Contents of shared directory: ***
2025-02-24 13:53:56 (18308): Guest Log: total 664648
2025-02-24 13:53:56 (18308): Guest Log: -rwxrwxrwx. 1 root root 345567847 Feb 23 12:02 ATLAS.root_0
2025-02-24 13:53:56 (18308): Guest Log: -rwxrwxrwx. 1 root root 325909594 Feb 24  2025 HITS.pool.root.1
2025-02-24 13:53:56 (18308): Guest Log: -rwxrwxrwx. 1 root root      9004 Feb 23 12:02 init_data.xml
2025-02-24 13:53:56 (18308): Guest Log: -rwxrwxrwx. 1 root root    503554 Feb 23 11:58 input.tar.gz
2025-02-24 13:53:56 (18308): Guest Log: -rwxrwxrwx. 1 root root   8581120 Feb 24  2025 result.tar.gz
2025-02-24 13:53:56 (18308): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 11:58 start_atlas.sh
2025-02-24 13:53:56 (18308): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 13:53:56 (18308): VM Completion File Detected.
2025-02-24 13:53:56 (18308): Powering off VM.
2025-02-24 13:53:57 (18308): Successfully stopped VM.
2025-02-24 13:53:57 (18308): Deregistering VM. (boinc_73b7f2284cd715a7, slot#11)
2025-02-24 13:53:57 (18308): Removing network bandwidth throttle group from VM.
2025-02-24 13:53:58 (18308): Removing VM from VirtualBox.
13:54:03 (18308): called boinc_finish(0)

</stderr_txt>
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