Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 12:45:58 (18092): Detected: vboxwrapper 26206
2025-02-23 12:45:58 (18092): Detected: BOINC client v8.0.2
2025-02-23 12:45:59 (18092): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-02-23 12:45:59 (18092): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 12:45:59 (18092): Create VM. (boinc_649d164a0ed3a412, slot#2)
2025-02-23 12:46:00 (18092): Setting Memory Size for VM. (4400MB)
2025-02-23 12:46:00 (18092): Setting CPU Count for VM. (4)
2025-02-23 12:46:01 (18092): Setting Chipset Options for VM.
2025-02-23 12:46:01 (18092): Setting Graphics Controller Options for VM.
2025-02-23 12:46:01 (18092): Setting Boot Options for VM.
2025-02-23 12:46:01 (18092): Setting Network Configuration for NAT.
2025-02-23 12:46:02 (18092): Enabling VM Network Access.
2025-02-23 12:46:02 (18092): Disabling USB Support for VM.
2025-02-23 12:46:02 (18092): Disabling COM Port Support for VM.
2025-02-23 12:46:02 (18092): Disabling LPT Port Support for VM.
2025-02-23 12:46:03 (18092): Disabling Audio Support for VM.
2025-02-23 12:46:03 (18092): Disabling Clipboard Support for VM.
2025-02-23 12:46:03 (18092): Disabling Drag and Drop Support for VM.
2025-02-23 12:46:03 (18092): Adding storage controller(s) to VM.
2025-02-23 12:46:04 (18092): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 12:46:07 (18092): Adding VirtualBox Guest Additions to VM.
2025-02-23 12:46:07 (18092): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 12:46:07 (18092): forwarding host port 49578 to guest port 80
2025-02-23 12:46:08 (18092): Enabling remote desktop for VM.
2025-02-23 12:46:08 (18092): Required extension pack not installed, remote desktop not enabled.
2025-02-23 12:46:08 (18092): Enabling shared directory for VM.
2025-02-23 12:46:09 (18092): Starting VM using VBoxManage interface. (boinc_649d164a0ed3a412, slot#2)
2025-02-23 12:46:15 (18092): Successfully started VM. (PID = '14436')
2025-02-23 12:46:15 (18092): Reporting VM Process ID to BOINC.
2025-02-23 12:46:15 (18092): Guest Log: BIOS: VirtualBox 7.1.4
2025-02-23 12:46:15 (18092): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 12:46:15 (18092): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 12:46:15 (18092): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 12:46:15 (18092): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 12:46:15 (18092): Detected: Web Application Enabled (http://localhost:49578)
2025-02-23 12:46:15 (18092): Preference change detected
2025-02-23 12:46:15 (18092): Setting CPU throttle for VM. (100%)
2025-02-23 12:46:16 (18092): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 12:46:18 (18092): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 12:46:18 (18092): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 12:46:21 (18092): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 12:46:21 (18092): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 12:46:21 (18092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 12:46:28 (18092): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 12:46:28 (18092): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 12:46:35 (18092): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 12:46:35 (18092): Guest Log: 00:00:00.000181 main     Log opened 2025-02-23T12:46:32.675210000Z
2025-02-23 12:46:35 (18092): Guest Log: 00:00:00.000287 main     OS Product: Linux
2025-02-23 12:46:35 (18092): Guest Log: 00:00:00.000324 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 12:46:35 (18092): Guest Log: 00:00:00.000354 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 12:46:35 (18092): Guest Log: 00:00:00.000383 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 12:46:35 (18092): Guest Log: 00:00:00.000384 main     Process ID: 1310
2025-02-23 12:46:35 (18092): Guest Log: 00:00:00.000384 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 12:46:35 (18092): Guest Log: 00:00:00.001697 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 12:46:35 (18092): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 12:46:35 (18092): Guest Log: [INFO] Mounting shared directory
2025-02-23 12:46:35 (18092): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 12:46:40 (18092): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 12:46:40 (18092): Guest Log: [INFO] Detected branch: prod
2025-02-23 12:46:40 (18092): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 12:46:40 (18092): Guest Log: Copying input files
2025-02-23 12:46:43 (18092): Guest Log: Copied input files into RunAtlas.
2025-02-23 12:46:43 (18092): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 12:46:43 (18092): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 12:46:43 (18092): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 12:46:43 (18092): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 12:46:45 (18092): Guest Log: 00:00:10.005348 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 299 835 000ns (GuestNow=1 740 311 204 379 751 000 ns GuestLast=1 740 314 792 679 586 000 ns fSetTimeLastLoop=true )
2025-02-23 12:46:54 (18092): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 12:46:54 (18092): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 12:46:54 (18092): Guest Log: 2.6.3.0 1588 0 32200 142974 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 12:46:56 (18092): Guest Log: copied the webapp to /var/www
2025-02-23 12:46:57 (18092): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-23 12:46:57 (18092): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-23 12:46:57 (18092): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 12:46:57 (18092): Guest Log:  *** Starting ATLAS job. (PandaID=6523801544 taskID=43205094) ***
2025-02-23 13:01:55 (18092): Guest Log:  *** Job finished ***
2025-02-23 13:01:55 (18092): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:39,432 | INFO     | [payload] failed_post thread has finished
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:40,380 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:44,412 | INFO     | [data] queue_monitor thread has finished
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:45,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436957804352)>', '<ExcThread(monitor, started 140436203091712)>']
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:46,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:46,076 | INFO     | [monitor] control thread has ended
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:50,642 | INFO     | all workflow threads have been joined
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:50,643 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:50,643 | INFO     | traces error code: 0
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:50,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:50,753 [wrapper] ==== pilot stdout END ====
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:50,759 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:50,765 [wrapper] pilotpid: 5924
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:50,770 [wrapper] Pilot exit status: 0
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:51,034 [wrapper] pandaids: 6523801544
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:51,079 [wrapper] cleanup supervisor_pilot  5930 5925
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:51,087 [wrapper] Test setup, not cleaning
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:51,103 [wrapper] apfmon messages muted
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:51,110 [wrapper] ==== wrapper stdout END ====
2025-02-23 13:01:55 (18092): Guest Log: 2025-02-23 12:01:51,116 [wrapper] ==== wrapper stderr END ====
2025-02-23 13:01:55 (18092): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 13:01:55 (18092): Guest Log:     "exeErrorCode": 65,
2025-02-23 13:01:55 (18092): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitialize(): standard std::exception is caught\"",
2025-02-23 13:01:55 (18092): Guest Log:     "pilotErrorCode": 1137,
2025-02-23 13:01:55 (18092): Guest Log:     "pilotErrorDiag": "Failed to stage-out file: ('',), {})]:failed to transfer files using copytools=['mv']",
2025-02-23 13:01:55 (18092): Guest Log:  *** Listing of results directory ***
2025-02-23 13:01:55 (18092): Guest Log: total 3932
2025-02-23 13:01:55 (18092): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Feb 23 05:42 pilot3.tar.gz
2025-02-23 13:01:55 (18092): Guest Log: -rw-r--r--. 1 atlas atlas    5118 Feb 23 05:48 queuedata.json
2025-02-23 13:01:55 (18092): Guest Log: -rwx------. 1 atlas atlas   35865 Feb 23 05:49 runpilot2-wrapper.sh
2025-02-23 13:01:55 (18092): Guest Log: -rwxr-xr-x. 1 atlas atlas    9370 Feb 23 11:46 init_data.xml
2025-02-23 13:01:55 (18092): Guest Log: -rwxr-xr-x. 1 atlas atlas  503559 Feb 23 11:46 input.tar.gz
2025-02-23 13:01:55 (18092): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Feb 23 11:46 start_atlas.sh
2025-02-23 13:01:55 (18092): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb 23 11:46 EVNT.43092757._001650.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 13:01:55 (18092): Guest Log: -rw-r--r--. 1 atlas atlas    2546 Feb 23 11:46 pandaJob.out
2025-02-23 13:01:55 (18092): Guest Log: -rw-------. 1 atlas atlas     424 Feb 23 11:47 setup.sh.local
2025-02-23 13:01:55 (18092): Guest Log: -rw-------. 1 atlas atlas  987728 Feb 23 11:48 agis_schedconf.cvmfs.json
2025-02-23 13:01:55 (18092): Guest Log: -rw-------. 1 atlas atlas 1582569 Feb 23 11:48 agis_ddmendpoints.agis.ALL.json
2025-02-23 13:01:55 (18092): Guest Log: drwx------. 4 atlas atlas    4096 Feb 23 11:48 pilot3
2025-02-23 13:01:55 (18092): Guest Log: -rw-------. 1 atlas atlas      95 Feb 23 12:00 pilot_heartbeat.json
2025-02-23 13:01:55 (18092): Guest Log: -rw-------. 1 atlas atlas    1014 Feb 23 12:01 memory_monitor_summary.json
2025-02-23 13:01:55 (18092): Guest Log: -rw-------. 1 atlas atlas   48186 Feb 23 12:01 log.43205094._038288.job.log.tgz.1
2025-02-23 13:01:55 (18092): Guest Log: -rw-------. 1 atlas atlas   11284 Feb 23 12:01 heartbeat.json
2025-02-23 13:01:55 (18092): Guest Log: -rw-------. 1 atlas atlas    4398 Feb 23 12:01 pilotlog.txt
2025-02-23 13:01:55 (18092): Guest Log: -rw-------. 1 atlas atlas  120081 Feb 23 12:01 log.43205094._038288.job.log.1
2025-02-23 13:01:55 (18092): Guest Log: -rw-r--r--. 1 atlas atlas     571 Feb 23 12:01 runtime_log
2025-02-23 13:01:55 (18092): Guest Log: -rw-------. 1 atlas atlas  143360 Feb 23 12:01 result.tar.gz
2025-02-23 13:01:55 (18092): Guest Log: -rw-r--r--. 1 atlas atlas   10242 Feb 23 12:01 runtime_log.err
2025-02-23 13:01:55 (18092): Guest Log: -rw-------. 1 atlas atlas     637 Feb 23 12:01 Q8tMDmZ2J66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDms5uKDmX1n1tm.diag
2025-02-23 13:01:55 (18092): Guest Log: Looking for outputfile HITS.43205094._038288.pool.root.1
2025-02-23 13:01:55 (18092): Guest Log: No HITS file was produced
2025-02-23 13:01:55 (18092): Guest Log: Successfully finished the ATLAS job!
2025-02-23 13:01:55 (18092): Guest Log: Copying the results back to the shared directory!
2025-02-23 13:01:55 (18092): Guest Log:  *** Contents of shared directory: ***
2025-02-23 13:01:55 (18092): Guest Log: total 334164
2025-02-23 13:01:55 (18092): Guest Log: -rwxrwxrwx. 1 root root 341501922 Feb 23 11:45 ATLAS.root_0
2025-02-23 13:01:55 (18092): Guest Log: -rwxrwxrwx. 1 root root      9370 Feb 23 11:45 init_data.xml
2025-02-23 13:01:55 (18092): Guest Log: -rwxrwxrwx. 1 root root    503559 Feb 23 11:45 input.tar.gz
2025-02-23 13:01:55 (18092): Guest Log: -rwxrwxrwx. 1 root root    143360 Feb 23 12:01 result.tar.gz
2025-02-23 13:01:55 (18092): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 11:45 start_atlas.sh
2025-02-23 13:01:55 (18092): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 13:01:55 (18092): VM Completion File Detected.
2025-02-23 13:01:55 (18092): Powering off VM.
2025-02-23 13:01:57 (18092): Successfully stopped VM.
2025-02-23 13:01:57 (18092): Deregistering VM. (boinc_649d164a0ed3a412, slot#2)
2025-02-23 13:01:57 (18092): Removing network bandwidth throttle group from VM.
2025-02-23 13:01:57 (18092): Removing VM from VirtualBox.
13:02:02 (18092): called boinc_finish(0)

</stderr_txt>
]]>

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