Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 12:47:57 (28533): Detected: vboxwrapper 26206
2025-02-23 12:47:57 (28533): Detected: BOINC client v8.0.2
2025-02-23 12:47:57 (28533): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2025-02-23 12:47:57 (28533): Detected: Sandbox Configuration Enabled
2025-02-23 12:47:57 (28533): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 12:47:57 (28533): Create VM. (boinc_c9c4d900a6a0770c, slot#1)
2025-02-23 12:47:58 (28533): Setting Memory Size for VM. (4600MB)
2025-02-23 12:47:58 (28533): Setting CPU Count for VM. (6)
2025-02-23 12:47:58 (28533): Setting Chipset Options for VM.
2025-02-23 12:47:58 (28533): Setting Graphics Controller Options for VM.
2025-02-23 12:47:58 (28533): Setting Boot Options for VM.
2025-02-23 12:47:58 (28533): Setting Network Configuration for NAT.
2025-02-23 12:47:58 (28533): Enabling VM Network Access.
2025-02-23 12:47:58 (28533): Disabling USB Support for VM.
2025-02-23 12:47:58 (28533): Disabling COM Port Support for VM.
2025-02-23 12:47:58 (28533): Disabling Audio Support for VM.
2025-02-23 12:47:58 (28533): Disabling Clipboard Support for VM.
2025-02-23 12:47:58 (28533): Disabling Drag and Drop Support for VM.
2025-02-23 12:47:58 (28533): Adding storage controller(s) to VM.
2025-02-23 12:47:58 (28533): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 12:48:00 (28533): Adding VirtualBox Guest Additions to VM.
2025-02-23 12:48:00 (28533): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 12:48:00 (28533): forwarding host port 64267 to guest port 80
2025-02-23 12:48:00 (28533): Enabling remote desktop for VM.
2025-02-23 12:48:00 (28533): Required extension pack not installed, remote desktop not enabled.
2025-02-23 12:48:00 (28533): Enabling shared directory for VM.
2025-02-23 12:48:00 (28533): Starting VM using VBoxManage interface. (boinc_c9c4d900a6a0770c, slot#1)
2025-02-23 12:48:03 (28533): Successfully started VM. (PID = '28607')
2025-02-23 12:48:03 (28533): Reporting VM Process ID to BOINC.
2025-02-23 12:48:03 (28533): Guest Log: BIOS: VirtualBox 7.0.18
2025-02-23 12:48:03 (28533): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 12:48:03 (28533): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 12:48:03 (28533): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 12:48:03 (28533): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 12:48:03 (28533): Detected: Web Application Enabled (http://localhost:64267)
2025-02-23 12:48:03 (28533): Preference change detected
2025-02-23 12:48:03 (28533): Setting CPU throttle for VM. (75%)
2025-02-23 12:48:03 (28533): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 12:48:05 (28533): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 12:48:05 (28533): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 12:48:08 (28533): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 12:48:08 (28533): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 12:48:08 (28533): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 12:48:14 (28533): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 12:48:14 (28533): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 12:48:21 (28533): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 12:48:21 (28533): Guest Log: 00:00:00.000133 main     Log opened 2025-02-23T11:48:19.086963000Z
2025-02-23 12:48:21 (28533): Guest Log: 00:00:00.000231 main     OS Product: Linux
2025-02-23 12:48:21 (28533): Guest Log: 00:00:00.000270 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 12:48:21 (28533): Guest Log: 00:00:00.000306 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 12:48:21 (28533): Guest Log: 00:00:00.000344 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 12:48:21 (28533): Guest Log: 00:00:00.000345 main     Process ID: 1334
2025-02-23 12:48:21 (28533): Guest Log: 00:00:00.000345 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 12:48:21 (28533): Guest Log: 00:00:00.001795 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 12:48:21 (28533): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 12:48:21 (28533): Guest Log: [INFO] Mounting shared directory
2025-02-23 12:48:21 (28533): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 12:49:24 (28533): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 12:49:24 (28533): Guest Log: [INFO] Detected branch: prod
2025-02-23 12:49:24 (28533): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 12:49:24 (28533): Guest Log: Copying input files
2025-02-23 12:49:28 (28533): Guest Log: Copied input files into RunAtlas.
2025-02-23 12:49:28 (28533): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 12:49:28 (28533): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 12:49:28 (28533): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 12:49:28 (28533): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 12:50:11 (28533): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 12:50:12 (28533): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 12:50:12 (28533): Guest Log: 2.6.3.0 1633 1 29560 142974 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
2025-02-23 12:50:12 (28533): Guest Log: copied the webapp to /var/www
2025-02-23 12:50:12 (28533): Guest Log: ATHENA_PROC_NUMBER=6
2025-02-23 12:50:12 (28533): Guest Log: ATHENA_CORE_NUMBER=6
2025-02-23 12:50:13 (28533): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 12:50:13 (28533): Guest Log:  *** Starting ATLAS job. (PandaID=6523359320 taskID=43078919) ***
2025-02-23 13:03:08 (28533): Guest Log:  *** Job finished ***
2025-02-23 13:03:08 (28533): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:02:57,566 | INFO     | [payload] failed_post thread has finished
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:02:57,806 | INFO     | [data] copytool_in thread has finished
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:02:59,336 | INFO     | [data] queue_monitor thread has finished
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:02:59,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139759448389440)>', '<ExcThread(monitor, started 139759015937792)>']
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:00,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:00,349 | INFO     | [monitor] control thread has ended
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:04,993 | INFO     | all workflow threads have been joined
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:04,993 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:04,993 | INFO     | traces error code: 0
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:04,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:05,068 [wrapper] ==== pilot stdout END ====
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:05,076 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:05,084 [wrapper] pilotpid: 6023
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:05,093 [wrapper] Pilot exit status: 0
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:05,258 [wrapper] pandaids: 6523359320
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:05,313 [wrapper] cleanup supervisor_pilot  6029 6024
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:05,321 [wrapper] Test setup, not cleaning
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:05,337 [wrapper] apfmon messages muted
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:05,344 [wrapper] ==== wrapper stdout END ====
2025-02-23 13:03:08 (28533): Guest Log: 2025-02-23 12:03:05,352 [wrapper] ==== wrapper stderr END ====
2025-02-23 13:03:08 (28533): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 13:03:08 (28533): Guest Log:     "exeErrorCode": 65,
2025-02-23 13:03:08 (28533): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-02-23 13:03:08 (28533): Guest Log:     "pilotErrorCode": 1305,
2025-02-23 13:03:08 (28533): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 11:59:03,501 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-02-23 13:03:08 (28533): Guest Log:  *** Listing of results directory ***
2025-02-23 13:03:08 (28533): Guest Log: total 3896
2025-02-23 13:03:08 (28533): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Feb 22 19:28 pilot3.tar.gz
2025-02-23 13:03:08 (28533): Guest Log: -rwx------. 1 atlas atlas   35865 Feb 22 19:29 runpilot2-wrapper.sh
2025-02-23 13:03:08 (28533): Guest Log: -rw-r--r--. 1 atlas atlas    5118 Feb 22 19:29 queuedata.json
2025-02-23 13:03:08 (28533): Guest Log: -rw-r-----. 1 atlas atlas   17569 Feb 23 11:49 start_atlas.sh
2025-02-23 13:03:08 (28533): Guest Log: -rw-r-----. 1 atlas atlas  503554 Feb 23 11:49 input.tar.gz
2025-02-23 13:03:08 (28533): Guest Log: -rw-r--r--. 1 atlas atlas    8516 Feb 23 11:49 init_data.xml
2025-02-23 13:03:08 (28533): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb 23 11:49 EVNT.43078917._001191.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 13:03:08 (28533): Guest Log: -rw-r--r--. 1 atlas atlas    2545 Feb 23 11:50 pandaJob.out
2025-02-23 13:03:08 (28533): Guest Log: -rw-------. 1 atlas atlas     424 Feb 23 11:50 setup.sh.local
2025-02-23 13:03:08 (28533): Guest Log: -rw-------. 1 atlas atlas  987728 Feb 23 11:53 agis_schedconf.cvmfs.json
2025-02-23 13:03:08 (28533): Guest Log: -rw-------. 1 atlas atlas 1582569 Feb 23 11:53 agis_ddmendpoints.agis.ALL.json
2025-02-23 13:03:08 (28533): Guest Log: drwx------. 4 atlas atlas    4096 Feb 23 11:53 pilot3
2025-02-23 13:03:08 (28533): Guest Log: -rw-------. 1 atlas atlas    1006 Feb 23 11:59 memory_monitor_summary.json
2025-02-23 13:03:08 (28533): Guest Log: -rw-------. 1 atlas atlas   21857 Feb 23 11:59 log.43078919._088595.job.log.tgz.1
2025-02-23 13:03:08 (28533): Guest Log: -rw-------. 1 atlas atlas      95 Feb 23 12:02 pilot_heartbeat.json
2025-02-23 13:03:08 (28533): Guest Log: -rw-------. 1 atlas atlas    8441 Feb 23 12:02 heartbeat.json
2025-02-23 13:03:08 (28533): Guest Log: -rw-------. 1 atlas atlas    4398 Feb 23 12:03 pilotlog.txt
2025-02-23 13:03:08 (28533): Guest Log: -rw-------. 1 atlas atlas  103398 Feb 23 12:03 log.43078919._088595.job.log.1
2025-02-23 13:03:08 (28533): Guest Log: -rw-------. 1 atlas atlas     188 Feb 23 12:03 output.list
2025-02-23 13:03:08 (28533): Guest Log: -rw-r--r--. 1 atlas atlas     620 Feb 23 12:03 runtime_log
2025-02-23 13:03:08 (28533): Guest Log: -rw-------. 1 atlas atlas  143360 Feb 23 12:03 result.tar.gz
2025-02-23 13:03:08 (28533): Guest Log: -rw-r--r--. 1 atlas atlas   10827 Feb 23 12:03 runtime_log.err
2025-02-23 13:03:08 (28533): Guest Log: -rw-------. 1 atlas atlas     654 Feb 23 12:03 2pANDmDNA66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPVuKDmBqInEo.diag
2025-02-23 13:03:08 (28533): Guest Log: Looking for outputfile HITS.43078919._088595.pool.root.1
2025-02-23 13:03:08 (28533): Guest Log: No HITS file was produced
2025-02-23 13:03:08 (28533): Guest Log: Successfully finished the ATLAS job!
2025-02-23 13:03:08 (28533): Guest Log: Copying the results back to the shared directory!
2025-02-23 13:03:08 (28533): Guest Log:  *** Contents of shared directory: ***
2025-02-23 13:03:08 (28533): Guest Log: total 340696
2025-02-23 13:03:08 (28533): Guest Log: -rw-rw----. 1 root root 345899565 Feb 23 11:47 ATLAS.root_0
2025-02-23 13:03:08 (28533): Guest Log: -rw-rw-r--. 1 root root      8516 Feb 23 11:47 init_data.xml
2025-02-23 13:03:08 (28533): Guest Log: -rw-rw----. 1 root root    503554 Feb 23 11:47 input.tar.gz
2025-02-23 13:03:08 (28533): Guest Log: -rw-r--r--. 1 root root    143360 Feb 23  2025 result.tar.gz
2025-02-23 13:03:08 (28533): Guest Log: -rw-rw----. 1 root root     17569 Feb 23 11:47 start_atlas.sh
2025-02-23 13:03:08 (28533): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 13:03:08 (28533): VM Completion File Detected.
2025-02-23 13:03:08 (28533): Powering off VM.
2025-02-23 13:03:08 (28533): Successfully stopped VM.
2025-02-23 13:03:08 (28533): Deregistering VM. (boinc_c9c4d900a6a0770c, slot#1)
2025-02-23 13:03:08 (28533): Removing network bandwidth throttle group from VM.
2025-02-23 13:03:08 (28533): Removing VM from VirtualBox.
13:03:14 (28533): called boinc_finish(0)

</stderr_txt>
]]>

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