Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:46:18 (241554): wrapper (7.7.26015): starting
06:46:18 (241554): wrapper: running run_atlas (--nthreads 8)
[2025-02-23 06:46:18] Arguments: --nthreads 8
[2025-02-23 06:46:18] Threads: 8
[2025-02-23 06:46:18] Checking for CVMFS
[2025-02-23 06:46:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-23 06:46:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-23 06:46:19] Running cvmfs_config stat atlas.cern.ch
[2025-02-23 06:46:19] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/minerva.osgstorage.org: Transport endpoint is not connected
[2025-02-23 06:46:19] 
[2025-02-23 06:46:19] CVMFS is ok
[2025-02-23 06:46:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 06:46:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 06:46:19] Further information can be found at the LHC@home message board.
[2025-02-23 06:46:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 06:46:19] Checking for apptainer binary...
[2025-02-23 06:46:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-23 06:46:19] Running /usr/bin/apptainer --version
[2025-02-23 06:46:19] apptainer version 1.3.2-1.el7
[2025-02-23 06:46:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 06:46:26] c-211-33-2.aglt2.org
[2025-02-23 06:46:26] apptainer works
[2025-02-23 06:46:26] Set ATHENA_PROC_NUMBER=8
[2025-02-23 06:46:26] Set ATHENA_CORE_NUMBER=8
[2025-02-23 06:46:26] Starting ATLAS job with PandaID=6523791900
[2025-02-23 06:46:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 16:39:12]  *** The last 200 lines of the pilot log: ***
[2025-02-23 16:39:12] 2025-02-23 21:38:56,941 | INFO     | chi2: 8.3492954307488
[2025-02-23 16:39:12] 2025-02-23 21:38:56,942 | INFO     | model: linear, x: [1740311425.0, 1740311486.0, 1740311547.0, 1740311608.0, 1740311669.0, 1740311730.0, 1740311791.0, 1740311852.0, 1740311913.0, 1740311974.0, 1740
[2025-02-23 16:39:12] 2025-02-23 21:38:56,942 | INFO     | sum of square deviations: 58336193994.202415
[2025-02-23 16:39:12] 2025-02-23 21:38:56,949 | INFO     | sum of deviations: 585539329336.8402
[2025-02-23 16:39:12] 2025-02-23 21:38:56,949 | INFO     | mean x: 1740328871.1239092
[2025-02-23 16:39:12] 2025-02-23 21:38:56,950 | INFO     | mean y: 2500112.1431064573
[2025-02-23 16:39:12] 2025-02-23 21:38:56,950 | INFO     | -- intersect: -17465746104.34314
[2025-02-23 16:39:12] 2025-02-23 21:38:56,950 | INFO     | intersect: -17465746104.34314
[2025-02-23 16:39:12] 2025-02-23 21:38:56,950 | INFO     | chi2: 6.667264579450684
[2025-02-23 16:39:12] 2025-02-23 21:38:56,951 | INFO     | current chi2=6.667264579450684 (change=20.145781943510222 %)
[2025-02-23 16:39:12] 2025-02-23 21:38:56,951 | INFO     | right removable region: 572
[2025-02-23 16:39:12] 2025-02-23 21:38:56,951 | INFO     | model: linear, x: [1740311730.0, 1740311791.0, 1740311852.0, 1740311913.0, 1740311974.0, 1740312035.0, 1740312096.0, 1740312157.0, 1740312218.0, 1740312279.0, 1740
[2025-02-23 16:39:12] 2025-02-23 21:38:56,952 | INFO     | sum of square deviations: 58336150684.202415
[2025-02-23 16:39:12] 2025-02-23 21:38:56,958 | INFO     | sum of deviations: 336851255744.9597
[2025-02-23 16:39:12] 2025-02-23 21:38:56,959 | INFO     | mean x: 1740329176.1239092
[2025-02-23 16:39:12] 2025-02-23 21:38:56,959 | INFO     | mean y: 2509451.535776614
[2025-02-23 16:39:12] 2025-02-23 21:38:56,959 | INFO     | -- intersect: -10046697798.363953
[2025-02-23 16:39:12] 2025-02-23 21:38:56,959 | INFO     | intersect: -10046697798.363953
[2025-02-23 16:39:12] 2025-02-23 21:38:56,960 | INFO     | chi2: 5.1178717269682075
[2025-02-23 16:39:12] 2025-02-23 21:38:56,960 | INFO     | current chi2=5.1178717269682075 (change=38.70295081283026 %)
[2025-02-23 16:39:12] 2025-02-23 21:38:56,960 | INFO     | model: linear, x: [1740312035.0, 1740312096.0, 1740312157.0, 1740312218.0, 1740312279.0, 1740312340.0, 1740312401.0, 1740312462.0, 1740312523.0, 1740312584.0, 1740
[2025-02-23 16:39:12] 2025-02-23 21:38:56,961 | INFO     | sum of square deviations: 56822277389.125
[2025-02-23 16:39:12] 2025-02-23 21:38:56,967 | INFO     | sum of deviations: 205117746989.75003
[2025-02-23 16:39:12] 2025-02-23 21:38:56,967 | INFO     | mean x: 1740329328.625
[2025-02-23 16:39:12] 2025-02-23 21:38:56,968 | INFO     | mean y: 2522720.5809859154
[2025-02-23 16:39:12] 2025-02-23 21:38:56,968 | INFO     | -- intersect: -6279739225.084428
[2025-02-23 16:39:12] 2025-02-23 21:38:56,968 | INFO     | intersect: -6279739225.084428
[2025-02-23 16:39:12] 2025-02-23 21:38:56,969 | INFO     | chi2: 3.331086199743885
[2025-02-23 16:39:12] 2025-02-23 21:38:56,969 | INFO     | current chi2=3.331086199743885 (change=34.91266726770431 %)
[2025-02-23 16:39:12] 2025-02-23 21:38:56,969 | INFO     | model: linear, x: [1740312340.0, 1740312401.0, 1740312462.0, 1740312523.0, 1740312584.0, 1740312645.0, 1740312706.0, 1740312767.0, 1740312828.0, 1740312889.0, 1740
[2025-02-23 16:39:12] 2025-02-23 21:38:56,970 | INFO     | sum of square deviations: 55334823194.04644
[2025-02-23 16:39:12] 2025-02-23 21:38:56,976 | INFO     | sum of deviations: 100889083738.13173
[2025-02-23 16:39:12] 2025-02-23 21:38:56,976 | INFO     | mean x: 1740329481.12611
[2025-02-23 16:39:12] 2025-02-23 21:38:56,976 | INFO     | mean y: 2533393.589698046
[2025-02-23 16:39:12] 2025-02-23 21:38:56,977 | INFO     | -- intersect: -3170518160.899816
[2025-02-23 16:39:12] 2025-02-23 21:38:56,977 | INFO     | intersect: -3170518160.899816
[2025-02-23 16:39:12] 2025-02-23 21:38:56,978 | INFO     | chi2: 2.140908808364669
[2025-02-23 16:39:12] 2025-02-23 21:38:56,978 | INFO     | current chi2=2.140908808364669 (change=35.729408367478584 %)
[2025-02-23 16:39:12] 2025-02-23 21:38:56,978 | INFO     | model: linear, x: [1740312645.0, 1740312706.0, 1740312767.0, 1740312828.0, 1740312889.0, 1740312950.0, 1740313011.0, 1740313072.0, 1740313133.0, 1740313194.0, 1740
[2025-02-23 16:39:12] 2025-02-23 21:38:56,979 | INFO     | sum of square deviations: 53873555536.46572
[2025-02-23 16:39:12] 2025-02-23 21:38:56,985 | INFO     | sum of deviations: 61785760353.5341
[2025-02-23 16:39:12] 2025-02-23 21:38:56,985 | INFO     | mean x: 1740329633.6272402
[2025-02-23 16:39:12] 2025-02-23 21:38:56,985 | INFO     | mean y: 2537471.3727598567
[2025-02-23 16:39:12] 2025-02-23 21:38:56,985 | INFO     | -- intersect: -1993387776.3429513
[2025-02-23 16:39:12] 2025-02-23 21:38:56,986 | INFO     | intersect: -1993387776.3429513
[2025-02-23 16:39:12] 2025-02-23 21:38:56,986 | INFO     | chi2: 1.9941056199912097
[2025-02-23 16:39:12] 2025-02-23 21:38:56,987 | INFO     | current chi2=1.9941056199912097 (change=6.857050043415663 %)
[2025-02-23 16:39:12] 2025-02-23 21:38:56,987 | INFO     | left removable region: 40
[2025-02-23 16:39:12] 2025-02-23 21:38:56,987 | INFO     | model: linear, x: [1740313865.0, 1740313926.0, 1740313987.0, 1740314048.0, 1740314110.0, 1740314171.0, 1740314231.0, 1740314292.0, 1740314353.0, 1740314414.0, 1740
[2025-02-23 16:39:12] 2025-02-23 21:38:56,988 | INFO     | sum of square deviations: 46688178661.789474
[2025-02-23 16:39:12] 2025-02-23 21:38:56,993 | INFO     | sum of deviations: 54146817848.47366
[2025-02-23 16:39:12] 2025-02-23 21:38:56,994 | INFO     | mean x: 1740330060.631579
[2025-02-23 16:39:12] 2025-02-23 21:38:56,994 | INFO     | mean y: 2555159.5432330826
[2025-02-23 16:39:12] 2025-02-23 21:38:56,994 | INFO     | -- intersect: -2015800182.0062895
[2025-02-23 16:39:12] 2025-02-23 21:38:56,994 | INFO     | intersect: -2015800182.0062895
[2025-02-23 16:39:12] 2025-02-23 21:38:56,995 | INFO     | chi2: 0.002535161332499837
[2025-02-23 16:39:12] 2025-02-23 21:38:56,995 | INFO     | -- intersect: -2015800182.0062895
[2025-02-23 16:39:12] 2025-02-23 21:38:56,995 | INFO     | current memory leak: 1.16 B/s (using 532 data points, chi2=0.00)
[2025-02-23 16:39:12] 2025-02-23 21:38:56,996 | INFO     | ..............................
[2025-02-23 16:39:12] 2025-02-23 21:38:56,996 | INFO     | . Timing measurements:
[2025-02-23 16:39:12] 2025-02-23 21:38:56,996 | INFO     | . get job = 0 s
[2025-02-23 16:39:12] 2025-02-23 21:38:56,996 | INFO     | . initial setup = 3 s
[2025-02-23 16:39:12] 2025-02-23 21:38:56,996 | INFO     | . payload setup = 43 s
[2025-02-23 16:39:12] 2025-02-23 21:38:56,996 | INFO     | . stage-in = 0 s
[2025-02-23 16:39:12] 2025-02-23 21:38:56,997 | INFO     | . payload execution = 35306 s
[2025-02-23 16:39:12] 2025-02-23 21:38:56,997 | INFO     | . stage-out = 6 s
[2025-02-23 16:39:12] 2025-02-23 21:38:56,997 | INFO     | . log creation = 1 s
[2025-02-23 16:39:12] 2025-02-23 21:38:56,997 | INFO     | ..............................
[2025-02-23 16:39:12] 2025-02-23 21:38:57,356 | INFO     | 
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | job summary report
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | --------------------------------------------------
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | PanDA job id: 6523791900
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | task id: 43205094
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | errors: (none)
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | pilot state: finished 
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | transexitcode: 0
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | exeerrorcode: 0
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | exeerrordiag: 
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | exitcode: 0
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | exitmsg: OK
[2025-02-23 16:39:12] 2025-02-23 21:38:57,357 | INFO     | cpuconsumptiontime: 99326 s
[2025-02-23 16:39:12] 2025-02-23 21:38:57,358 | INFO     | nevents: 400
[2025-02-23 16:39:12] 2025-02-23 21:38:57,358 | INFO     | neventsw: 0
[2025-02-23 16:39:12] 2025-02-23 21:38:57,358 | INFO     | pid: 279988
[2025-02-23 16:39:12] 2025-02-23 21:38:57,358 | INFO     | pgrp: 279988
[2025-02-23 16:39:12] 2025-02-23 21:38:57,358 | INFO     | corecount: 8
[2025-02-23 16:39:12] 2025-02-23 21:38:57,358 | INFO     | event service: False
[2025-02-23 16:39:12] 2025-02-23 21:38:57,358 | INFO     | sizes: {0: 2383138, 1: 2383337, 2: 2383337, 12: 2383365, 23: 2383393, 33: 2383627, 34: 2383811, 35354: 2423938, 35355: 2423937, 35362: 2432962, 35363: 2433018, 354
[2025-02-23 16:39:12] 2025-02-23 21:38:57,358 | INFO     | --------------------------------------------------
[2025-02-23 16:39:12] 2025-02-23 21:38:57,358 | INFO     | 
[2025-02-23 16:39:12] 2025-02-23 21:38:57,358 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-23 16:39:12] 2025-02-23 21:38:57,627 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,627 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,627 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,629 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,629 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 16:39:12] 2025-02-23 21:38:57,629 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,629 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 16:39:12] 2025-02-23 21:38:57,629 | INFO     | job 6523791900 has completed (purged errors)
[2025-02-23 16:39:12] 2025-02-23 21:38:57,629 | INFO     | overall cleanup function is called
[2025-02-23 16:39:12] 2025-02-23 21:38:58,647 | INFO     | --- collectZombieJob: --- 10, [279988]
[2025-02-23 16:39:12] 2025-02-23 21:38:58,648 | INFO     | zombie collector waiting for pid 279988
[2025-02-23 16:39:12] 2025-02-23 21:38:58,648 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 16:39:12] 2025-02-23 21:38:58,648 | INFO     | collected zombie processes
[2025-02-23 16:39:12] 2025-02-23 21:38:58,648 | INFO     | will attempt to kill all subprocesses of pid=279988
[2025-02-23 16:39:12] 2025-02-23 21:38:59,063 | INFO     | process IDs to be killed: [279988] (in reverse order)
[2025-02-23 16:39:12] 2025-02-23 21:38:59,522 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 16:39:12] 2025-02-23 21:38:59,523 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 16:39:12] 2025-02-23 21:38:59,535 | INFO     | did not find any defunct processes belonging to 279988
[2025-02-23 16:39:12] 2025-02-23 21:38:59,547 | INFO     | did not find any defunct processes belonging to 279988
[2025-02-23 16:39:12] 2025-02-23 21:38:59,547 | INFO     | ready for new job
[2025-02-23 16:39:12] 2025-02-23 21:38:59,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 16:39:12] 2025-02-23 21:38:59,550 | INFO     | **************************************
[2025-02-23 16:39:12] 2025-02-23 21:38:59,550 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 16:39:12] 2025-02-23 21:38:59,551 | INFO     | **************************************
[2025-02-23 16:39:12] 2025-02-23 21:38:59,551 | INFO     | 
[2025-02-23 16:39:12] 2025-02-23 21:38:59,559 | INFO     | architecture information:
[2025-02-23 16:39:12] 2025-02-23 21:38:59,571 | INFO     | executing command: cat /etc/os-release
[2025-02-23 16:39:12] 2025-02-23 21:38:59,759 | INFO     | cat /etc/os-release:
[2025-02-23 16:39:12] NAME="CentOS Linux"
[2025-02-23 16:39:12] VERSION="7 (Core)"
[2025-02-23 16:39:12] ID="centos"
[2025-02-23 16:39:12] ID_LIKE="rhel fedora"
[2025-02-23 16:39:12] VERSION_ID="7"
[2025-02-23 16:39:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 16:39:12] ANSI_COLOR="0;31"
[2025-02-23 16:39:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 16:39:12] HOME_URL="https://www.centos.org/"
[2025-02-23 16:39:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 16:39:12] 
[2025-02-23 16:39:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 16:39:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 16:39:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 16:39:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 16:39:12] 
[2025-02-23 16:39:12] 2025-02-23 21:38:59,759 | INFO     | **************************************
[2025-02-23 16:39:12] 2025-02-23 21:39:00,264 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-23 16:39:12] 2025-02-23 21:39:00,311 | INFO     | sufficient remaining disk space (102386106368 B)
[2025-02-23 16:39:12] 2025-02-23 21:39:00,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 16:39:12] 2025-02-23 21:39:00,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 16:39:12] 2025-02-23 21:39:00,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 16:39:12] 2025-02-23 21:39:00,313 | INFO     | aborting loop
[2025-02-23 16:39:12] 2025-02-23 21:39:00,349 | INFO     | all data control threads have been joined
[2025-02-23 16:39:12] 2025-02-23 21:39:00,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 16:39:12] 2025-02-23 21:39:01,069 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 16:39:12] 2025-02-23 21:39:01,251 | INFO     | all payload control threads have been joined
[2025-02-23 16:39:12] 2025-02-23 21:39:01,330 | INFO     | [job] job monitor thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:01,332 | INFO     | [job] retrieve thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:01,355 | INFO     | [data] control thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:01,504 | INFO     | all job control threads have been joined
[2025-02-23 16:39:12] 2025-02-23 21:39:01,539 | INFO     | [data] copytool_in thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:01,546 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:01,579 | INFO     | [payload] validate_post thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:01,605 | INFO     | [job] validate thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:02,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 16:39:12] 2025-02-23 21:39:02,287 | INFO     | [payload] control thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:02,407 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:02,412 | INFO     | [data] copytool_out thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:02,510 | INFO     | [job] control thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:02,608 | INFO     | [payload] failed_post thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:02,660 | INFO     | PID=254983 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-02-23 16:39:12] 2025-02-23 21:39:02,660 | INFO     | .. there are 23 such processes running
[2025-02-23 16:39:12] 2025-02-23 21:39:02,660 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 16:39:12] 2025-02-23 21:39:02,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 16:39:12] 2025-02-23 21:39:02,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 16:39:12] 2025-02-23 21:39:02,767 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:02,811 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:03,125 | INFO     | [job] queue monitor thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:05,077 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 16:39:12] 2025-02-23 21:39:05,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068572600128)>', '<ExcThread(monitor, started 140067993540352)>']
[2025-02-23 16:39:12] 2025-02-23 21:39:05,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 16:39:12] 2025-02-23 21:39:05,678 | INFO     | [monitor] control thread has ended
[2025-02-23 16:39:12] 2025-02-23 21:39:10,661 | INFO     | all workflow threads have been joined
[2025-02-23 16:39:12] 2025-02-23 21:39:10,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 16:39:12] 2025-02-23 21:39:10,663 | INFO     | traces error code: 0
[2025-02-23 16:39:12] 2025-02-23 21:39:10,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 16:39:12] 2025-02-23 21:39:11,320 [wrapper] ==== pilot stdout END ====
[2025-02-23 16:39:12] 2025-02-23 21:39:11,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 16:39:12] 2025-02-23 21:39:11,407 [wrapper] pilotpid: 254983
[2025-02-23 16:39:12] 2025-02-23 21:39:11,442 [wrapper] Pilot exit status: 0
[2025-02-23 16:39:12] 2025-02-23 21:39:11,626 [wrapper] pandaids: 6523791900
[2025-02-23 16:39:12] 2025-02-23 21:39:11,777 [wrapper] cleanup supervisor_pilot 107357 254984
[2025-02-23 16:39:12] 2025-02-23 21:39:11,813 [wrapper] Test setup, not cleaning
[2025-02-23 16:39:12] 2025-02-23 21:39:11,891 [wrapper] apfmon messages muted
[2025-02-23 16:39:12] 2025-02-23 21:39:11,933 [wrapper] ==== wrapper stdout END ====
[2025-02-23 16:39:12] 2025-02-23 21:39:11,967 [wrapper] ==== wrapper stderr END ====
[2025-02-23 16:39:12]  *** Error codes and diagnostics ***
[2025-02-23 16:39:12]     "exeErrorCode": 0,
[2025-02-23 16:39:12]     "exeErrorDiag": "",
[2025-02-23 16:39:12]     "pilotErrorCode": 0,
[2025-02-23 16:39:12]     "pilotErrorDiag": "",
[2025-02-23 16:39:12]  *** Listing of results directory ***
[2025-02-23 16:39:12] total 668480
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas    491065 Feb 23 00:42 pilot3.tar.gz
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas      5118 Feb 23 00:42 queuedata.json
[2025-02-23 16:39:12] -rwx------ 1 boincer umatlas     35865 Feb 23 00:45 runpilot2-wrapper.sh
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas       100 Feb 23 06:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 16:39:12] -rwxr-xr-x 1 boincer umatlas      7986 Feb 23 06:46 run_atlas
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas       105 Feb 23 06:46 job.xml
[2025-02-23 16:39:12] -rw-r--r-- 2 boincer umatlas 345484046 Feb 23 06:46 EVNT.43092757._001690.pool.root.1
[2025-02-23 16:39:12] -rw-r--r-- 2 boincer umatlas     17569 Feb 23 06:46 start_atlas.sh
[2025-02-23 16:39:12] drwxrwx--x 2 boincer umatlas      4096 Feb 23 06:46 shared
[2025-02-23 16:39:12] -rw-r--r-- 2 boincer umatlas    503564 Feb 23 06:46 input.tar.gz
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas         0 Feb 23 06:46 boinc_lockfile
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas      2547 Feb 23 06:46 pandaJob.out
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas       424 Feb 23 06:46 setup.sh.local
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas    987728 Feb 23 06:47 agis_schedconf.cvmfs.json
[2025-02-23 16:39:12] drwx------ 4 boincer umatlas      4096 Feb 23 06:47 pilot3
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas 324989161 Feb 23 16:35 HITS.43205094._038268.pool.root.1
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas       532 Feb 23 16:35 boinc_task_state.xml
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas      1066 Feb 23 16:37 memory_monitor_summary.json
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas   1582569 Feb 23 16:38 agis_ddmendpoints.agis.ALL.json
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas    659949 Feb 23 16:38 log.43205094._038268.job.log.tgz.1
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas        95 Feb 23 16:38 pilot_heartbeat.json
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas      6300 Feb 23 16:38 init_data.xml
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas      7788 Feb 23 16:38 heartbeat.json
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas        28 Feb 23 16:39 wrapper_checkpoint.txt
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas      4610 Feb 23 16:39 pilotlog.txt
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas      8192 Feb 23 16:39 boinc_mmap_file
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas   4458581 Feb 23 16:39 log.43205094._038268.job.log.1
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas       357 Feb 23 16:39 output.list
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas       620 Feb 23 16:39 runtime_log
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas   5140480 Feb 23 16:39 result.tar.gz
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas     11024 Feb 23 16:39 runtime_log.err
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas       666 Feb 23 16:39 0cUNDmfyJ66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmX5uKDmCWEzhm.diag
[2025-02-23 16:39:12] -rw-r--r-- 1 boincer umatlas     21500 Feb 23 16:39 stderr.txt
[2025-02-23 16:39:12] HITS file was successfully produced:
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas 324989161 Feb 23 16:35 shared/HITS.pool.root.1
[2025-02-23 16:39:12]  *** Contents of shared directory: ***
[2025-02-23 16:39:12] total 660304
[2025-02-23 16:39:12] -rw-r--r-- 2 boincer umatlas 345484046 Feb 23 06:46 ATLAS.root_0
[2025-02-23 16:39:12] -rw-r--r-- 2 boincer umatlas     17569 Feb 23 06:46 start_atlas.sh
[2025-02-23 16:39:12] -rw-r--r-- 2 boincer umatlas    503564 Feb 23 06:46 input.tar.gz
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas 324989161 Feb 23 16:35 HITS.pool.root.1
[2025-02-23 16:39:12] -rw------- 1 boincer umatlas   5140480 Feb 23 16:39 result.tar.gz
16:39:14 (241554): run_atlas exited; CPU time 99216.639225
16:39:14 (241554): called boinc_finish(0)

</stderr_txt>
]]>

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