Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 21:43:43 (14644): Detected: vboxwrapper 26206
2025-02-23 21:43:43 (14644): Detected: BOINC client v8.0.2
2025-02-23 21:43:43 (14644): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-23 21:43:43 (14644): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 21:43:44 (14644): Create VM. (boinc_b5b30b9f423ac1ef, slot#12)
2025-02-23 21:43:44 (14644): Setting Memory Size for VM. (4200MB)
2025-02-23 21:43:45 (14644): Setting CPU Count for VM. (2)
2025-02-23 21:43:45 (14644): Setting Chipset Options for VM.
2025-02-23 21:43:45 (14644): Setting Graphics Controller Options for VM.
2025-02-23 21:43:45 (14644): Setting Boot Options for VM.
2025-02-23 21:43:46 (14644): Setting Network Configuration for NAT.
2025-02-23 21:43:46 (14644): Enabling VM Network Access.
2025-02-23 21:43:46 (14644): Disabling USB Support for VM.
2025-02-23 21:43:46 (14644): Disabling COM Port Support for VM.
2025-02-23 21:43:47 (14644): Disabling LPT Port Support for VM.
2025-02-23 21:43:47 (14644): Disabling Audio Support for VM.
2025-02-23 21:43:47 (14644): Disabling Clipboard Support for VM.
2025-02-23 21:43:47 (14644): Disabling Drag and Drop Support for VM.
2025-02-23 21:43:48 (14644): Adding storage controller(s) to VM.
2025-02-23 21:43:48 (14644): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 21:43:48 (14644): Adding VirtualBox Guest Additions to VM.
2025-02-23 21:43:49 (14644): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 21:43:49 (14644): forwarding host port 54344 to guest port 80
2025-02-23 21:43:49 (14644): Enabling remote desktop for VM.
2025-02-23 21:43:50 (14644): Required extension pack not installed, remote desktop not enabled.
2025-02-23 21:43:50 (14644): Enabling shared directory for VM.
2025-02-23 21:43:50 (14644): Starting VM using VBoxManage interface. (boinc_b5b30b9f423ac1ef, slot#12)
2025-02-23 21:43:57 (14644): Successfully started VM. (PID = '18956')
2025-02-23 21:43:57 (14644): Reporting VM Process ID to BOINC.
2025-02-23 21:43:57 (14644): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-23 21:43:57 (14644): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 21:43:57 (14644): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 21:43:57 (14644): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 21:43:57 (14644): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 21:43:57 (14644): Detected: Web Application Enabled (http://localhost:54344)
2025-02-23 21:43:57 (14644): Preference change detected
2025-02-23 21:43:57 (14644): Setting CPU throttle for VM. (100%)
2025-02-23 21:43:57 (14644): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 21:43:59 (14644): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 21:43:59 (14644): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 21:44:01 (14644): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 21:44:01 (14644): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 21:44:01 (14644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 21:44:06 (14644): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 21:44:06 (14644): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 21:44:12 (14644): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 21:44:12 (14644): Guest Log: 00:00:00.000121 main     Log opened 2025-02-23T21:44:10.354157000Z
2025-02-23 21:44:12 (14644): Guest Log: 00:00:00.000204 main     OS Product: Linux
2025-02-23 21:44:12 (14644): Guest Log: 00:00:00.000230 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 21:44:12 (14644): Guest Log: 00:00:00.000252 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 21:44:12 (14644): Guest Log: 00:00:00.000272 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 21:44:12 (14644): Guest Log: 00:00:00.000273 main     Process ID: 1263
2025-02-23 21:44:12 (14644): Guest Log: 00:00:00.000274 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 21:44:12 (14644): Guest Log: 00:00:00.000853 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 21:44:12 (14644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 21:44:12 (14644): Guest Log: [INFO] Mounting shared directory
2025-02-23 21:44:12 (14644): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 21:44:22 (14644): Guest Log: 00:00:10.003370 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 588 512 857 000ns (GuestNow=1 740 307 461 844 228 000 ns GuestLast=1 740 347 050 357 085 000 ns fSetTimeLastLoop=true )
2025-02-23 21:44:22 (14644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 21:44:22 (14644): Guest Log: [INFO] Detected branch: prod
2025-02-23 21:44:22 (14644): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 21:44:22 (14644): Guest Log: Copying input files
2025-02-23 21:44:24 (14644): Guest Log: Copied input files into RunAtlas.
2025-02-23 21:44:24 (14644): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 21:44:24 (14644): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 21:44:24 (14644): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 21:44:24 (14644): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 21:44:36 (14644): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 21:44:36 (14644): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 21:44:36 (14644): Guest Log: 2.6.3.0 1540 0 30164 142972 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 21:44:36 (14644): Guest Log: copied the webapp to /var/www
2025-02-23 21:44:36 (14644): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-23 21:44:36 (14644): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-23 21:44:38 (14644): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 21:44:38 (14644): Guest Log:  *** Starting ATLAS job. (PandaID=6522951464 taskID=43205094) ***
2025-02-23 23:24:25 (14644): Status Report: Elapsed Time: '6000.519312'
2025-02-23 23:24:25 (14644): Status Report: CPU Time: '9248.484375'
2025-02-24 01:11:24 (14644): Status Report: Elapsed Time: '12000.872622'
2025-02-24 01:11:24 (14644): Status Report: CPU Time: '21978.296875'
2025-02-24 02:54:34 (14644): Status Report: Elapsed Time: '18001.044275'
2025-02-24 02:54:34 (14644): Status Report: CPU Time: '34208.093750'
2025-02-24 04:35:33 (14644): Status Report: Elapsed Time: '24001.599634'
2025-02-24 04:35:33 (14644): Status Report: CPU Time: '46238.359375'
2025-02-24 06:16:33 (14644): Status Report: Elapsed Time: '30002.567852'
2025-02-24 06:16:33 (14644): Status Report: CPU Time: '58258.875000'
2025-02-24 07:57:28 (14644): Status Report: Elapsed Time: '36002.623718'
2025-02-24 07:57:28 (14644): Status Report: CPU Time: '70282.343750'
2025-02-24 09:38:27 (14644): Status Report: Elapsed Time: '42003.000334'
2025-02-24 09:38:27 (14644): Status Report: CPU Time: '82311.171875'
2025-02-24 11:21:53 (14644): Status Report: Elapsed Time: '48003.526987'
2025-02-24 11:21:53 (14644): Status Report: CPU Time: '94641.812500'
2025-02-24 12:52:03 (14644): Guest Log:  *** Job finished ***
2025-02-24 12:52:03 (14644): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:33,905 | INFO     | [payload] failed_post thread has finished
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:34,069 | INFO     | [job] control thread has finished
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:35,623 | INFO     | [data] queue_monitor thread has finished
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:36,680 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139800036476736)>', '<ExcThread(monitor, started 139799734232832)>']
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:37,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:37,080 | INFO     | [monitor] control thread has ended
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:41,685 | INFO     | all workflow threads have been joined
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:41,685 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:41,685 | INFO     | traces error code: 0
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:41,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:41,792 [wrapper] ==== pilot stdout END ====
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:41,796 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:41,800 [wrapper] pilotpid: 5839
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:41,803 [wrapper] Pilot exit status: 0
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:43,550 [wrapper] pandaids: 6522951464
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:43,573 [wrapper] cleanup supervisor_pilot 11222 5840
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:43,576 [wrapper] Test setup, not cleaning
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:43,583 [wrapper] apfmon messages muted
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:43,587 [wrapper] ==== wrapper stdout END ====
2025-02-24 12:52:03 (14644): Guest Log: 2025-02-24 01:51:43,590 [wrapper] ==== wrapper stderr END ====
2025-02-24 12:52:03 (14644): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 12:52:03 (14644): Guest Log:     "exeErrorCode": 0,
2025-02-24 12:52:03 (14644): Guest Log:     "exeErrorDiag": "",
2025-02-24 12:52:03 (14644): Guest Log:     "pilotErrorCode": 0,
2025-02-24 12:52:03 (14644): Guest Log:     "pilotErrorDiag": "",
2025-02-24 12:52:03 (14644): Guest Log:  *** Listing of results directory ***
2025-02-24 12:52:03 (14644): Guest Log: total 343824
2025-02-24 12:52:03 (14644): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 22 10:59 pilot3.tar.gz
2025-02-24 12:52:03 (14644): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 22 11:17 queuedata.json
2025-02-24 12:52:03 (14644): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 22 11:17 runpilot2-wrapper.sh
2025-02-24 12:52:03 (14644): Guest Log: -rwxr-xr-x. 1 atlas atlas      9004 Feb 23 10:44 init_data.xml
2025-02-24 12:52:03 (14644): Guest Log: -rwxr-xr-x. 1 atlas atlas    503559 Feb 23 10:44 input.tar.gz
2025-02-24 12:52:03 (14644): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 23 10:44 start_atlas.sh
2025-02-24 12:52:03 (14644): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 23 10:44 EVNT.43092757._001799.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 12:52:03 (14644): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Feb 23 10:44 pandaJob.out
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas       424 Feb 23 10:44 setup.sh.local
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas    987736 Feb 23 10:46 agis_schedconf.cvmfs.json
2025-02-24 12:52:03 (14644): Guest Log: drwx------. 4 atlas atlas      4096 Feb 23 10:47 pilot3
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas 332152113 Feb 24 01:50 HITS.43205094._035936.pool.root.1
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 01:50 pilot_heartbeat.json
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas      1020 Feb 24 01:51 memory_monitor_summary.json
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 24 01:51 agis_ddmendpoints.agis.ALL.json
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas    786923 Feb 24 01:51 log.43205094._035936.job.log.tgz.1
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas      7707 Feb 24 01:51 heartbeat.json
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 24 01:51 pilotlog.txt
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas   7306426 Feb 24 01:51 log.43205094._035936.job.log.1
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 01:51 output.list
2025-02-24 12:52:03 (14644): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 01:51 runtime_log
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas   8110080 Feb 24 01:51 result.tar.gz
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas       669 Feb 24 01:51 UZzNDm8g256n9Rq4apOajLDm4fhM0noT9bVoFjIUDmNCeKDmTGXyzm.diag
2025-02-24 12:52:03 (14644): Guest Log: -rw-r--r--. 1 atlas atlas     10966 Feb 24 01:51 runtime_log.err
2025-02-24 12:52:03 (14644): Guest Log: Looking for outputfile HITS.43205094._035936.pool.root.1
2025-02-24 12:52:03 (14644): Guest Log: HITS file was successfully produced
2025-02-24 12:52:03 (14644): Guest Log: -rw-------. 1 atlas atlas 332152113 Feb 24 01:50 /home/atlas/RunAtlas/HITS.43205094._035936.pool.root.1
2025-02-24 12:52:04 (14644): Guest Log: Successfully finished the ATLAS job!
2025-02-24 12:52:04 (14644): Guest Log: Copying the results back to the shared directory!
2025-02-24 12:52:04 (14644): Guest Log:  *** Contents of shared directory: ***
2025-02-24 12:52:04 (14644): Guest Log: total 669032
2025-02-24 12:52:04 (14644): Guest Log: -rwxrwxrwx. 1 root root 344286090 Feb 23 10:43 ATLAS.root_0
2025-02-24 12:52:04 (14644): Guest Log: -rwxrwxrwx. 1 root root 332152113 Feb 24  2025 HITS.pool.root.1
2025-02-24 12:52:04 (14644): Guest Log: -rwxrwxrwx. 1 root root      9004 Feb 23 10:43 init_data.xml
2025-02-24 12:52:04 (14644): Guest Log: -rwxrwxrwx. 1 root root    503559 Feb 23 10:31 input.tar.gz
2025-02-24 12:52:04 (14644): Guest Log: -rwxrwxrwx. 1 root root   8110080 Feb 24  2025 result.tar.gz
2025-02-24 12:52:04 (14644): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 10:31 start_atlas.sh
2025-02-24 12:52:04 (14644): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 12:52:04 (14644): VM Completion File Detected.
2025-02-24 12:52:04 (14644): Powering off VM.
2025-02-24 12:52:04 (14644): Successfully stopped VM.
2025-02-24 12:52:04 (14644): Deregistering VM. (boinc_b5b30b9f423ac1ef, slot#12)
2025-02-24 12:52:05 (14644): Removing network bandwidth throttle group from VM.
2025-02-24 12:52:05 (14644): Removing VM from VirtualBox.
12:52:11 (14644): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN