Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:17:32 (54129): wrapper (7.7.26015): starting
02:17:32 (54129): wrapper: running run_atlas (--nthreads 8)
[2025-02-23 02:17:32] Arguments: --nthreads 8
[2025-02-23 02:17:32] Threads: 8
[2025-02-23 02:17:32] Checking for CVMFS
[2025-02-23 02:17:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-23 02:17:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-23 02:17:32] Running cvmfs_config stat atlas.cern.ch
[2025-02-23 02:17:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-23 02:17:33] 2.11.2.0 81263 4660 156488 142968 0 344 17464205 18432001 25880 130560 0 25983139 98.549 91160289 61857 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-23 02:17:33] CVMFS is ok
[2025-02-23 02:17:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 02:17:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 02:17:33] Further information can be found at the LHC@home message board.
[2025-02-23 02:17:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 02:17:33] Checking for apptainer binary...
[2025-02-23 02:17:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-23 02:17:33] Running /usr/bin/apptainer --version
[2025-02-23 02:17:33] apptainer version 1.3.2-1.el7
[2025-02-23 02:17:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 02:17:39] c-212-7.aglt2.org
[2025-02-23 02:17:39] apptainer works
[2025-02-23 02:17:39] Set ATHENA_PROC_NUMBER=8
[2025-02-23 02:17:39] Set ATHENA_CORE_NUMBER=8
[2025-02-23 02:17:39] Starting ATLAS job with PandaID=6523504223
[2025-02-23 02:17:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 07:45:37]  *** The last 200 lines of the pilot log: ***
[2025-02-23 07:45:37] 2025-02-23 11:32:43,717 | INFO     | sum of square deviations: 2912832613.9336495
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | sum of deviations: 62548103795.24646
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | mean x: 1740302274.07109
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | mean y: 2504001.450236967
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | -- intersect: -37367514019.15324
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | intersect: -37367514019.15324
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | chi2: 1.4678861427816852
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | -- intersect: -37367514019.15324
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | current memory leak: 21.47 B/s (using 211 data points, chi2=1.47)
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | ..............................
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | . Timing measurements:
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | . get job = 0 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | . initial setup = 3 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . payload setup = 42 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . stage-in = 0 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . payload execution = 15135 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . stage-out = 4 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . log creation = 0 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | ..............................
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-6523504223/pilotlog.txt
[2025-02-23 07:45:37] 2025-02-23 11:32:43,732 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-02-23 07:45:37] - Log from pilotlog.txt -
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | sum of deviations: 62548103795.24646
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | mean x: 1740302274.07109
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | mean y: 2504001.450236967
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | -- intersect: -37367514019.15324
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | intersect: -37367514019.15324
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | chi2: 1.4678861427816852
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | -- intersect: -37367514019.15324
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | current memory leak: 21.47 B/s (using 211 data points, chi2=1.47)
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | ..............................
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | . Timing measurements:
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | . get job = 0 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | . initial setup = 3 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . payload setup = 42 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . stage-in = 0 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . payload execution = 15135 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . stage-out = 4 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . log creation = 0 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | ..............................
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-6523504223/pilotlog.txt
[2025-02-23 07:45:37] 2025-02-23 11:32:43,732 | WARNING  | 
[2025-02-23 07:45:37] [begin log extracts]
[2025-02-23 07:45:37] - Log from pilotlog.txt -
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | sum of deviations: 62548103795.24646
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | mean x: 1740302274.07109
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | mean y: 2504001.450236967
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | -- intersect: -37367514019.15324
[2025-02-23 07:45:37] 2025-02-23 11:32:43,718 | INFO     | intersect: -37367514019.15324
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | chi2: 1.4678861427816852
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | -- intersect: -37367514019.15324
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | current memory leak: 21.47 B/s (using 211 data points, chi2=1.47)
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | ..............................
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | . Timing measurements:
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | . get job = 0 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,719 | INFO     | . initial setup = 3 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . payload setup = 42 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . stage-in = 0 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . payload execution = 15135 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . stage-out = 4 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | . log creation = 0 s
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | ..............................
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-23 07:45:37] 2025-02-23 11:32:43,720 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-6523504223/pilotlog.txt
[2025-02-23 07:45:37] [end log extracts]
[2025-02-23 07:45:37] 2025-02-23 11:32:43,732 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-02-23 07:45:37] 2025-02-23 11:32:43,732 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 11:13:28,854 CRITICAL Transform executor raised TransformValidationExcep
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | 
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | job summary report
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | --------------------------------------------------
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | PanDA job id: 6523504223
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | task id: 43078919
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 11:13:28,854 CRITICAL Transform executor raised TransformValidationExceptio
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | pilot state: failed 
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | transexitcode: 65
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | exeerrorcode: 65
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | exeerrordiag: EVNTtoHITS got a SIGBUS signal (exit code 135)
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | exitcode: 65
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | exitmsg: EVNTtoHITS got a SIGBUS signal (exit code 135)
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | cpuconsumptiontime: 41339 s
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | nevents: 0
[2025-02-23 07:45:37] 2025-02-23 11:32:44,012 | INFO     | neventsw: 0
[2025-02-23 07:45:37] 2025-02-23 11:32:44,013 | INFO     | pid: 2854
[2025-02-23 07:45:37] 2025-02-23 11:32:44,013 | INFO     | pgrp: 2854
[2025-02-23 07:45:37] 2025-02-23 11:32:44,013 | INFO     | corecount: 8
[2025-02-23 07:45:37] 2025-02-23 11:32:44,013 | INFO     | event service: False
[2025-02-23 07:45:37] 2025-02-23 11:32:44,013 | INFO     | sizes: {0: 2383190, 1: 2383389, 11: 2383389, 22: 2383417, 24: 2383651, 33: 2383679, 15181: 2412937, 15183: 2417231, 15186: 2417231, 15187: 2417287, 15188: 2417287,
[2025-02-23 07:45:37] 2025-02-23 11:32:44,013 | INFO     | --------------------------------------------------
[2025-02-23 07:45:37] 2025-02-23 11:32:44,013 | INFO     | 
[2025-02-23 07:45:37] 2025-02-23 11:32:44,013 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-23 07:45:37] 2025-02-23 11:32:44,029 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | job 6523504223 has completed (purged errors)
[2025-02-23 07:45:37] 2025-02-23 11:32:44,030 | INFO     | overall cleanup function is called
[2025-02-23 07:45:37] 2025-02-23 11:32:45,039 | INFO     | --- collectZombieJob: --- 10, [2854]
[2025-02-23 07:45:37] 2025-02-23 11:32:45,040 | INFO     | zombie collector waiting for pid 2854
[2025-02-23 07:45:37] 2025-02-23 11:32:45,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 07:45:37] 2025-02-23 11:32:45,040 | INFO     | collected zombie processes
[2025-02-23 07:45:37] 2025-02-23 11:32:45,040 | INFO     | will attempt to kill all subprocesses of pid=2854
[2025-02-23 07:45:37] 2025-02-23 11:32:45,167 | INFO     | process IDs to be killed: [2854] (in reverse order)
[2025-02-23 07:45:37] 2025-02-23 11:32:45,245 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 07:45:37] 2025-02-23 11:32:45,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 07:45:37] 2025-02-23 11:32:45,258 | INFO     | did not find any defunct processes belonging to 2854
[2025-02-23 07:45:37] 2025-02-23 11:32:45,269 | INFO     | did not find any defunct processes belonging to 2854
[2025-02-23 07:45:37] 2025-02-23 11:32:45,269 | INFO     | ready for new job
[2025-02-23 07:45:37] 2025-02-23 11:32:45,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 07:45:37] 2025-02-23 11:32:45,270 | INFO     | **************************************
[2025-02-23 07:45:37] 2025-02-23 11:32:45,270 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 07:45:37] 2025-02-23 11:32:45,271 | INFO     | **************************************
[2025-02-23 07:45:37] 2025-02-23 11:32:45,271 | INFO     | 
[2025-02-23 07:45:37] 2025-02-23 11:32:45,274 | INFO     | architecture information:
[2025-02-23 07:45:37] 2025-02-23 11:32:45,275 | INFO     | executing command: cat /etc/os-release
[2025-02-23 07:45:37] 2025-02-23 11:32:45,290 | INFO     | cat /etc/os-release:
[2025-02-23 07:45:37] NAME="CentOS Linux"
[2025-02-23 07:45:37] VERSION="7 (Core)"
[2025-02-23 07:45:37] ID="centos"
[2025-02-23 07:45:37] ID_LIKE="rhel fedora"
[2025-02-23 07:45:37] VERSION_ID="7"
[2025-02-23 07:45:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 07:45:37] ANSI_COLOR="0;31"
[2025-02-23 07:45:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 07:45:37] HOME_URL="https://www.centos.org/"
[2025-02-23 07:45:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 07:45:37] 
[2025-02-23 07:45:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 07:45:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 07:45:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 07:45:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 07:45:37] 
[2025-02-23 07:45:37] 2025-02-23 11:32:45,290 | INFO     | **************************************
[2025-02-23 07:45:37] 2025-02-23 11:32:45,794 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-23 07:45:37] 2025-02-23 11:32:45,810 | INFO     | sufficient remaining disk space (98730770432 B)
[2025-02-23 07:45:37] 2025-02-23 11:32:45,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 07:45:37] 2025-02-23 11:32:45,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 07:45:37] 2025-02-23 11:32:45,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 07:45:37] 2025-02-23 11:32:45,811 | INFO     | aborting loop
[2025-02-23 07:45:37] 2025-02-23 11:32:45,812 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-23 07:45:37] 2025-02-23 11:32:45,812 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 07:45:37] 2025-02-23 11:32:45,812 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 07:45:37] 2025-02-23 11:32:45,812 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 07:45:37] 2025-02-23 11:32:45,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 07:45:37] 2025-02-23 11:32:45,816 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 07:45:37] 2025-02-23 11:32:46,553 | INFO     | all data control threads have been joined
[2025-02-23 07:45:37] 2025-02-23 11:32:46,818 | INFO     | [job] job monitor thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:46,818 | INFO     | [job] retrieve thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:46,819 | INFO     | [job] queue monitor thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:46,874 | INFO     | all job control threads have been joined
[2025-02-23 07:45:37] 2025-02-23 11:32:47,036 | INFO     | [payload] failed_post thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:47,198 | INFO     | all payload control threads have been joined
[2025-02-23 07:45:37] 2025-02-23 11:32:47,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:47,546 | INFO     | [payload] validate_post thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:47,559 | INFO     | [data] control thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:47,591 | INFO     | [job] validate thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:47,600 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:47,664 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:47,776 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:47,821 | INFO     | [data] copytool_out thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:47,855 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 07:45:37] 2025-02-23 11:32:47,880 | INFO     | [job] control thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:48,020 | INFO     | [data] copytool_in thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:48,201 | INFO     | [payload] control thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:51,862 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 07:45:37] 2025-02-23 11:32:53,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144955004736)>', '<ExcThread(monitor, started 140144380212992)>']
[2025-02-23 07:45:37] 2025-02-23 11:32:53,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 07:45:37] 2025-02-23 11:32:53,857 | INFO     | [monitor] control thread has ended
[2025-02-23 07:45:37] 2025-02-23 11:32:58,579 | INFO     | all workflow threads have been joined
[2025-02-23 07:45:37] 2025-02-23 11:32:58,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 07:45:37] 2025-02-23 11:32:58,580 | INFO     | traces error code: 0
[2025-02-23 07:45:37] 2025-02-23 11:32:58,580 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 07:45:37] 2025-02-23 11:32:58,685 [wrapper] ==== pilot stdout END ====
[2025-02-23 07:45:37] 2025-02-23 11:32:58,688 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 07:45:37] 2025-02-23 11:32:58,691 [wrapper] pilotpid: 74737
[2025-02-23 07:45:37] 2025-02-23 11:32:58,693 [wrapper] Pilot exit status: 0
[2025-02-23 07:45:37] 2025-02-23 11:32:58,700 [wrapper] pandaids: 6523504223
[2025-02-23 07:45:37] 2025-02-23 11:32:58,747 [wrapper] cleanup supervisor_pilot 38576 74738
[2025-02-23 07:45:37] 2025-02-23 11:32:58,749 [wrapper] Test setup, not cleaning
[2025-02-23 07:45:37] 2025-02-23 11:32:58,754 [wrapper] apfmon messages muted
[2025-02-23 07:45:37] 2025-02-23 11:32:58,755 [wrapper] ==== wrapper stdout END ====
[2025-02-23 07:45:37] 2025-02-23 11:32:58,758 [wrapper] ==== wrapper stderr END ====
[2025-02-23 07:45:37]  *** Error codes and diagnostics ***
[2025-02-23 07:45:37]     "exeErrorCode": 65,
[2025-02-23 07:45:37]     "exeErrorDiag": "EVNTtoHITS got a SIGBUS signal (exit code 135)",
[2025-02-23 07:45:37]     "pilotErrorCode": 1305,
[2025-02-23 07:45:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 11:13:28,854 CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGBUS signal (exit code 135)",
[2025-02-23 07:45:37]  *** Listing of results directory ***
[2025-02-23 07:45:37] total 341528
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas    491065 Feb 22 20:25 pilot3.tar.gz
[2025-02-23 07:45:37] -rwx------ 1 boincer umatlas     35865 Feb 22 20:30 runpilot2-wrapper.sh
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas      5118 Feb 22 20:30 queuedata.json
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas       100 Feb 23 02:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 07:45:37] -rwxr-xr-x 1 boincer umatlas      7986 Feb 23 02:17 run_atlas
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas       105 Feb 23 02:17 job.xml
[2025-02-23 07:45:37] -rw-r--r-- 2 boincer umatlas 342851334 Feb 23 02:17 EVNT.43078917._001878.pool.root.1
[2025-02-23 07:45:37] -rw-r--r-- 2 boincer umatlas     17569 Feb 23 02:17 start_atlas.sh
[2025-02-23 07:45:37] drwxrwx--x 2 boincer umatlas      4096 Feb 23 02:17 shared
[2025-02-23 07:45:37] -rw-r--r-- 2 boincer umatlas    503552 Feb 23 02:17 input.tar.gz
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas         0 Feb 23 02:17 boinc_lockfile
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas      2546 Feb 23 02:17 pandaJob.out
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas       467 Feb 23 02:17 setup.sh.local
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas    987744 Feb 23 02:18 agis_schedconf.cvmfs.json
[2025-02-23 07:45:37] drwx------ 4 boincer umatlas      4096 Feb 23 02:18 pilot3
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas       531 Feb 23 06:13 boinc_task_state.xml
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas        95 Feb 23 06:31 pilot_heartbeat.json
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas      1080 Feb 23 06:32 memory_monitor_summary.json
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas    356335 Feb 23 06:32 log.43078919._090174.job.log.tgz.1
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas   1582569 Feb 23 06:32 agis_ddmendpoints.agis.ALL.json
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas      8723 Feb 23 06:32 heartbeat.json
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas      4338 Feb 23 06:32 pilotlog.txt
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas   1181504 Feb 23 06:32 log.43078919._090174.job.log.1
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas       188 Feb 23 06:32 output.list
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas       620 Feb 23 06:32 runtime_log
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas   1556480 Feb 23 06:32 result.tar.gz
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas       661 Feb 23 06:32 vl5LDmE0F66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmMruKDmH2hGln.diag
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas     11262 Feb 23 06:32 runtime_log.err
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas      6387 Feb 23 07:39 init_data.xml
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas        28 Feb 23 07:45 wrapper_checkpoint.txt
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas      8192 Feb 23 07:45 boinc_mmap_file
[2025-02-23 07:45:37] -rw-r--r-- 1 boincer umatlas     21313 Feb 23 07:45 stderr.txt
[2025-02-23 07:45:37] No HITS result produced
[2025-02-23 07:45:37]  *** Contents of shared directory: ***
[2025-02-23 07:45:37] total 336848
[2025-02-23 07:45:37] -rw-r--r-- 2 boincer umatlas 342851334 Feb 23 02:17 ATLAS.root_0
[2025-02-23 07:45:37] -rw-r--r-- 2 boincer umatlas     17569 Feb 23 02:17 start_atlas.sh
[2025-02-23 07:45:37] -rw-r--r-- 2 boincer umatlas    503552 Feb 23 02:17 input.tar.gz
[2025-02-23 07:45:37] -rw------- 1 boincer umatlas   1556480 Feb 23 06:32 result.tar.gz
07:45:39 (54129): run_atlas exited; CPU time 40451.502544
07:45:39 (54129): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN