Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 19:01:48 (10752): Detected: vboxwrapper 26206
2025-02-23 19:01:48 (10752): Detected: BOINC client v8.0.2
2025-02-23 19:01:49 (10752): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-23 19:01:49 (10752): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 19:01:49 (10752): Create VM. (boinc_048509b5c46f3941, slot#3)
2025-02-23 19:01:50 (10752): Setting Memory Size for VM. (4200MB)
2025-02-23 19:01:50 (10752): Setting CPU Count for VM. (2)
2025-02-23 19:01:50 (10752): Setting Chipset Options for VM.
2025-02-23 19:01:51 (10752): Setting Graphics Controller Options for VM.
2025-02-23 19:01:51 (10752): Setting Boot Options for VM.
2025-02-23 19:01:51 (10752): Setting Network Configuration for NAT.
2025-02-23 19:01:51 (10752): Enabling VM Network Access.
2025-02-23 19:01:52 (10752): Disabling USB Support for VM.
2025-02-23 19:01:52 (10752): Disabling COM Port Support for VM.
2025-02-23 19:01:52 (10752): Disabling LPT Port Support for VM.
2025-02-23 19:01:53 (10752): Disabling Audio Support for VM.
2025-02-23 19:01:53 (10752): Disabling Clipboard Support for VM.
2025-02-23 19:01:53 (10752): Disabling Drag and Drop Support for VM.
2025-02-23 19:01:53 (10752): Adding storage controller(s) to VM.
2025-02-23 19:01:54 (10752): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 19:01:54 (10752): Adding VirtualBox Guest Additions to VM.
2025-02-23 19:01:55 (10752): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 19:01:55 (10752): forwarding host port 53458 to guest port 80
2025-02-23 19:01:55 (10752): Enabling remote desktop for VM.
2025-02-23 19:01:56 (10752): Required extension pack not installed, remote desktop not enabled.
2025-02-23 19:01:56 (10752): Enabling shared directory for VM.
2025-02-23 19:01:56 (10752): Starting VM using VBoxManage interface. (boinc_048509b5c46f3941, slot#3)
2025-02-23 19:02:03 (10752): Successfully started VM. (PID = '8352')
2025-02-23 19:02:03 (10752): Reporting VM Process ID to BOINC.
2025-02-23 19:02:03 (10752): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-23 19:02:03 (10752): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 19:02:03 (10752): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 19:02:03 (10752): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 19:02:03 (10752): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 19:02:03 (10752): Detected: Web Application Enabled (http://localhost:53458)
2025-02-23 19:02:03 (10752): Preference change detected
2025-02-23 19:02:03 (10752): Setting CPU throttle for VM. (100%)
2025-02-23 19:02:03 (10752): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 19:02:06 (10752): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 19:02:06 (10752): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 19:02:08 (10752): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 19:02:08 (10752): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 19:02:08 (10752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 19:02:43 (10752): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 19:02:43 (10752): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 19:02:49 (10752): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 19:02:49 (10752): Guest Log: 00:00:00.000117 main     Log opened 2025-02-23T19:02:47.274901000Z
2025-02-23 19:02:49 (10752): Guest Log: 00:00:00.000199 main     OS Product: Linux
2025-02-23 19:02:49 (10752): Guest Log: 00:00:00.000233 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 19:02:49 (10752): Guest Log: 00:00:00.000257 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 19:02:49 (10752): Guest Log: 00:00:00.000282 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 19:02:49 (10752): Guest Log: 00:00:00.000283 main     Process ID: 1263
2025-02-23 19:02:49 (10752): Guest Log: 00:00:00.000284 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 19:02:49 (10752): Guest Log: 00:00:00.001247 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 19:02:49 (10752): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 19:02:49 (10752): Guest Log: [INFO] Mounting shared directory
2025-02-23 19:02:49 (10752): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 19:02:58 (10752): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 19:02:58 (10752): Guest Log: [INFO] Detected branch: prod
2025-02-23 19:02:58 (10752): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 19:02:58 (10752): Guest Log: Copying input files
2025-02-23 19:02:58 (10752): Guest Log: 00:00:10.007569 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 620 618 840 000ns (GuestNow=1 740 297 746 661 744 000 ns GuestLast=1 740 337 367 280 584 000 ns fSetTimeLastLoop=true )
2025-02-23 19:03:00 (10752): Guest Log: Copied input files into RunAtlas.
2025-02-23 19:03:00 (10752): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 19:03:00 (10752): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 19:03:00 (10752): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 19:03:00 (10752): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 19:03:12 (10752): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 19:03:13 (10752): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 19:03:13 (10752): Guest Log: 2.6.3.0 1540 0 30060 142968 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 19:03:15 (10752): Guest Log: copied the webapp to /var/www
2025-02-23 19:03:15 (10752): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-23 19:03:15 (10752): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-23 19:03:15 (10752): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 19:03:15 (10752): Guest Log:  *** Starting ATLAS job. (PandaID=6523477906 taskID=43078919) ***
2025-02-23 20:42:47 (10752): Status Report: Elapsed Time: '6000.289652'
2025-02-23 20:42:47 (10752): Status Report: CPU Time: '8885.609375'
2025-02-23 22:23:30 (10752): Status Report: Elapsed Time: '12000.336279'
2025-02-23 22:23:30 (10752): Status Report: CPU Time: '20880.359375'
2025-02-24 00:07:20 (10752): Status Report: Elapsed Time: '18000.696465'
2025-02-24 00:07:20 (10752): Status Report: CPU Time: '33258.203125'
2025-02-24 01:53:29 (10752): Status Report: Elapsed Time: '24001.420988'
2025-02-24 01:53:29 (10752): Status Report: CPU Time: '45860.687500'
2025-02-24 03:34:35 (10752): Status Report: Elapsed Time: '30001.944157'
2025-02-24 03:34:35 (10752): Status Report: CPU Time: '57894.343750'
2025-02-24 05:15:49 (10752): Status Report: Elapsed Time: '36002.555927'
2025-02-24 05:15:49 (10752): Status Report: CPU Time: '69943.453125'
2025-02-24 06:56:43 (10752): Status Report: Elapsed Time: '42003.083803'
2025-02-24 06:56:43 (10752): Status Report: CPU Time: '81968.218750'
2025-02-24 08:37:38 (10752): Status Report: Elapsed Time: '48003.984390'
2025-02-24 08:37:38 (10752): Status Report: CPU Time: '93999.828125'
2025-02-24 10:05:54 (10752): Guest Log:  *** Job finished ***
2025-02-24 10:05:54 (10752): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:10,779 | INFO     | [data] copytool_out thread has finished
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:11,024 | INFO     | [payload] execute_payloads thread has finished
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:14,485 | INFO     | [data] queue_monitor thread has finished
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:16,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177155864384)>', '<ExcThread(monitor, started 140176584075008)>']
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:16,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:16,543 | INFO     | [monitor] control thread has ended
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,031 | INFO     | all workflow threads have been joined
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,031 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,031 | INFO     | traces error code: 0
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,149 [wrapper] ==== pilot stdout END ====
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,153 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,157 [wrapper] pilotpid: 5871
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,160 [wrapper] Pilot exit status: 0
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,619 [wrapper] pandaids: 6523477906
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,642 [wrapper] cleanup supervisor_pilot 11268 5872
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,646 [wrapper] Test setup, not cleaning
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,653 [wrapper] apfmon messages muted
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,657 [wrapper] ==== wrapper stdout END ====
2025-02-24 10:05:54 (10752): Guest Log: 2025-02-23 23:05:21,661 [wrapper] ==== wrapper stderr END ====
2025-02-24 10:05:54 (10752): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 10:05:54 (10752): Guest Log:     "exeErrorCode": 0,
2025-02-24 10:05:54 (10752): Guest Log:     "exeErrorDiag": "",
2025-02-24 10:05:54 (10752): Guest Log:     "pilotErrorCode": 0,
2025-02-24 10:05:54 (10752): Guest Log:     "pilotErrorDiag": "",
2025-02-24 10:05:54 (10752): Guest Log:  *** Listing of results directory ***
2025-02-24 10:05:54 (10752): Guest Log: total 341556
2025-02-24 10:05:54 (10752): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 23 01:05 pilot3.tar.gz
2025-02-24 10:05:54 (10752): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 01:18 queuedata.json
2025-02-24 10:05:54 (10752): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 01:19 runpilot2-wrapper.sh
2025-02-24 10:05:54 (10752): Guest Log: -rwxr-xr-x. 1 atlas atlas      9002 Feb 23 08:02 init_data.xml
2025-02-24 10:05:54 (10752): Guest Log: -rwxr-xr-x. 1 atlas atlas    503559 Feb 23 08:02 input.tar.gz
2025-02-24 10:05:54 (10752): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 23 08:02 start_atlas.sh
2025-02-24 10:05:54 (10752): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 23 08:02 EVNT.43078917._002601.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 10:05:54 (10752): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Feb 23 08:02 pandaJob.out
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas       424 Feb 23 08:02 setup.sh.local
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas    987744 Feb 23 08:05 agis_schedconf.cvmfs.json
2025-02-24 10:05:54 (10752): Guest Log: drwx------. 4 atlas atlas      4096 Feb 23 08:06 pilot3
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas 329318454 Feb 23 23:04 HITS.43078919._090114.pool.root.1
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas        95 Feb 23 23:04 pilot_heartbeat.json
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas      1021 Feb 23 23:04 memory_monitor_summary.json
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 23 23:04 agis_ddmendpoints.agis.ALL.json
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas    789038 Feb 23 23:04 log.43078919._090114.job.log.tgz.1
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas      7708 Feb 23 23:05 heartbeat.json
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas      4714 Feb 23 23:05 pilotlog.txt
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas   7554145 Feb 23 23:05 log.43078919._090114.job.log.1
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas       357 Feb 23 23:05 output.list
2025-02-24 10:05:54 (10752): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 23 23:05 runtime_log
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas   8366080 Feb 23 23:05 result.tar.gz
2025-02-24 10:05:54 (10752): Guest Log: -rw-r--r--. 1 atlas atlas     10966 Feb 23 23:05 runtime_log.err
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas       669 Feb 23 23:05 fpWLDmLpF66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmGquKDmomYzKo.diag
2025-02-24 10:05:54 (10752): Guest Log: Looking for outputfile HITS.43078919._090114.pool.root.1
2025-02-24 10:05:54 (10752): Guest Log: HITS file was successfully produced
2025-02-24 10:05:54 (10752): Guest Log: -rw-------. 1 atlas atlas 329318454 Feb 23 23:04 /home/atlas/RunAtlas/HITS.43078919._090114.pool.root.1
2025-02-24 10:05:56 (10752): Guest Log: Successfully finished the ATLAS job!
2025-02-24 10:05:56 (10752): Guest Log: Copying the results back to the shared directory!
2025-02-24 10:05:56 (10752): Guest Log:  *** Contents of shared directory: ***
2025-02-24 10:05:56 (10752): Guest Log: total 662848
2025-02-24 10:05:56 (10752): Guest Log: -rwxrwxrwx. 1 root root 340527104 Feb 23 08:01 ATLAS.root_0
2025-02-24 10:05:56 (10752): Guest Log: -rwxrwxrwx. 1 root root 329318454 Feb 23  2025 HITS.pool.root.1
2025-02-24 10:05:56 (10752): Guest Log: -rwxrwxrwx. 1 root root      9002 Feb 23 08:01 init_data.xml
2025-02-24 10:05:56 (10752): Guest Log: -rwxrwxrwx. 1 root root    503559 Feb 23 07:49 input.tar.gz
2025-02-24 10:05:56 (10752): Guest Log: -rwxrwxrwx. 1 root root   8366080 Feb 23  2025 result.tar.gz
2025-02-24 10:05:56 (10752): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 07:49 start_atlas.sh
2025-02-24 10:05:56 (10752): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 10:05:56 (10752): VM Completion File Detected.
2025-02-24 10:05:56 (10752): Powering off VM.
2025-02-24 10:05:57 (10752): Successfully stopped VM.
2025-02-24 10:05:57 (10752): Deregistering VM. (boinc_048509b5c46f3941, slot#3)
2025-02-24 10:05:57 (10752): Removing network bandwidth throttle group from VM.
2025-02-24 10:05:58 (10752): Removing VM from VirtualBox.
10:06:03 (10752): called boinc_finish(0)

</stderr_txt>
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