Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 09:53:43 (39733): Detected: vboxwrapper 26206
2025-02-23 09:53:43 (39733): Detected: BOINC client v8.0.4
2025-02-23 09:53:43 (39733): Detected: VirtualBox VboxManage Interface (Version: 6.1.44)
2025-02-23 09:53:43 (39733): Detected: Sandbox Configuration Enabled
2025-02-23 09:53:43 (39733): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 09:53:44 (39733): Create VM. (boinc_d176ed6cb67db9c3, slot#2)
2025-02-23 09:53:44 (39733): Setting Memory Size for VM. (4200MB)
2025-02-23 09:53:44 (39733): Setting CPU Count for VM. (2)
2025-02-23 09:53:44 (39733): Setting Chipset Options for VM.
2025-02-23 09:53:44 (39733): Setting Graphics Controller Options for VM.
2025-02-23 09:53:44 (39733): Setting Boot Options for VM.
2025-02-23 09:53:44 (39733): Setting Network Configuration for NAT.
2025-02-23 09:53:44 (39733): Enabling VM Network Access.
2025-02-23 09:53:44 (39733): Disabling USB Support for VM.
2025-02-23 09:53:44 (39733): Disabling COM Port Support for VM.
2025-02-23 09:53:44 (39733): Disabling Audio Support for VM.
2025-02-23 09:53:44 (39733): Disabling Clipboard Support for VM.
2025-02-23 09:53:44 (39733): Disabling Drag and Drop Support for VM.
2025-02-23 09:53:44 (39733): Adding storage controller(s) to VM.
2025-02-23 09:53:44 (39733): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 09:53:45 (39733): Adding VirtualBox Guest Additions to VM.
2025-02-23 09:53:45 (39733): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 09:53:45 (39733): forwarding host port 56996 to guest port 80
2025-02-23 09:53:45 (39733): Enabling remote desktop for VM.
2025-02-23 09:53:45 (39733): Required extension pack not installed, remote desktop not enabled.
2025-02-23 09:53:45 (39733): Enabling shared directory for VM.
2025-02-23 09:53:45 (39733): Starting VM using VBoxManage interface. (boinc_d176ed6cb67db9c3, slot#2)
2025-02-23 09:53:46 (39733): Successfully started VM. (PID = '39800')
2025-02-23 09:53:46 (39733): Reporting VM Process ID to BOINC.
2025-02-23 09:53:46 (39733): Guest Log: BIOS: VirtualBox 6.1.44
2025-02-23 09:53:46 (39733): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 09:53:46 (39733): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 09:53:46 (39733): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 09:53:46 (39733): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 09:53:46 (39733): Detected: Web Application Enabled (http://localhost:56996)
2025-02-23 09:53:46 (39733): Preference change detected
2025-02-23 09:53:46 (39733): Setting CPU throttle for VM. (100%)
2025-02-23 09:53:46 (39733): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 09:53:48 (39733): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 09:53:48 (39733): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 09:54:10 (39733): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 09:54:10 (39733): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 09:54:10 (39733): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 09:54:19 (39733): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 09:54:19 (39733): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 09:54:34 (39733): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 09:54:34 (39733): Guest Log: 00:00:00.000222 main     Log opened 2025-02-23T08:54:31.874456000Z
2025-02-23 09:54:34 (39733): Guest Log: 00:00:00.000366 main     OS Product: Linux
2025-02-23 09:54:34 (39733): Guest Log: 00:00:00.000431 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 09:54:34 (39733): Guest Log: 00:00:00.000491 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 09:54:34 (39733): Guest Log: 00:00:00.000591 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 09:54:34 (39733): Guest Log: 00:00:00.000593 main     Process ID: 1232
2025-02-23 09:54:34 (39733): Guest Log: 00:00:00.000594 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 09:54:34 (39733): Guest Log: 00:00:00.002274 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 09:54:34 (39733): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 09:54:34 (39733): Guest Log: [INFO] Mounting shared directory
2025-02-23 09:54:34 (39733): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 09:54:37 (39733): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 09:54:37 (39733): Guest Log: [INFO] Detected branch: prod
2025-02-23 09:54:38 (39733): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 09:54:38 (39733): Guest Log: Copying input files
2025-02-23 09:54:40 (39733): Guest Log: Copied input files into RunAtlas.
2025-02-23 09:54:40 (39733): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 09:54:40 (39733): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 09:54:40 (39733): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 09:54:40 (39733): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 09:54:50 (39733): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 09:54:50 (39733): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 09:54:50 (39733): Guest Log: 2.6.3.0 1504 0 30088 142969 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 09:54:53 (39733): Guest Log: copied the webapp to /var/www
2025-02-23 09:54:53 (39733): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-23 09:54:53 (39733): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-23 09:54:53 (39733): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 09:54:53 (39733): Guest Log:  *** Starting ATLAS job. (PandaID=6523020588 taskID=43078919) ***
2025-02-23 09:59:32 (39733): Guest Log:  *** Job finished ***
2025-02-23 09:59:32 (39733): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:22,324 | INFO     | [payload] validate_post thread has finished
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:23,105 | INFO     | [data] copytool_out thread has finished
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:23,941 | INFO     | [data] queue_monitor thread has finished
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:25,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605470684992)>', '<ExcThread(monitor, started 140604705056512)>']
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:25,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:25,955 | INFO     | [monitor] control thread has ended
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,437 | INFO     | all workflow threads have been joined
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,438 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,438 | INFO     | traces error code: 0
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,533 [wrapper] ==== pilot stdout END ====
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,540 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,547 [wrapper] pilotpid: 5810
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,554 [wrapper] Pilot exit status: 0
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,624 [wrapper] pandaids: 6523020588
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,668 [wrapper] cleanup supervisor_pilot  5816 5811
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,675 [wrapper] Test setup, not cleaning
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,693 [wrapper] apfmon messages muted
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,701 [wrapper] ==== wrapper stdout END ====
2025-02-23 09:59:32 (39733): Guest Log: 2025-02-23 08:59:30,708 [wrapper] ==== wrapper stderr END ====
2025-02-23 09:59:32 (39733): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 09:59:32 (39733): Guest Log:     "exeErrorCode": 65,
2025-02-23 09:59:32 (39733): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-02-23 09:59:32 (39733): Guest Log:     "pilotErrorCode": 1305,
2025-02-23 09:59:32 (39733): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 08:57:04,383 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-02-23 09:59:32 (39733): Guest Log:  *** Listing of results directory ***
2025-02-23 09:59:32 (39733): Guest Log: total 3848
2025-02-23 09:59:32 (39733): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Feb 22 13:09 pilot3.tar.gz
2025-02-23 09:59:32 (39733): Guest Log: -rwx------. 1 atlas atlas   35865 Feb 22 13:31 runpilot2-wrapper.sh
2025-02-23 09:59:32 (39733): Guest Log: -rw-r--r--. 1 atlas atlas    5118 Feb 22 13:31 queuedata.json
2025-02-23 09:59:32 (39733): Guest Log: -rw-r--r--. 1 atlas atlas    8298 Feb 23 08:54 init_data.xml
2025-02-23 09:59:32 (39733): Guest Log: -rw-r-----. 1 atlas atlas  503553 Feb 23 08:54 input.tar.gz
2025-02-23 09:59:32 (39733): Guest Log: -rw-r-----. 1 atlas atlas   17569 Feb 23 08:54 start_atlas.sh
2025-02-23 09:59:32 (39733): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb 23 08:54 EVNT.43078917._002537.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 09:59:32 (39733): Guest Log: -rw-r--r--. 1 atlas atlas    2546 Feb 23 08:54 pandaJob.out
2025-02-23 09:59:32 (39733): Guest Log: -rw-------. 1 atlas atlas     424 Feb 23 08:54 setup.sh.local
2025-02-23 09:59:32 (39733): Guest Log: -rw-------. 1 atlas atlas  987736 Feb 23 08:55 agis_schedconf.cvmfs.json
2025-02-23 09:59:32 (39733): Guest Log: -rw-------. 1 atlas atlas 1582569 Feb 23 08:55 agis_ddmendpoints.agis.ALL.json
2025-02-23 09:59:32 (39733): Guest Log: drwx------. 4 atlas atlas    4096 Feb 23 08:55 pilot3
2025-02-23 09:59:32 (39733): Guest Log: -rw-------. 1 atlas atlas     971 Feb 23 08:57 memory_monitor_summary.json
2025-02-23 09:59:32 (39733): Guest Log: -rw-------. 1 atlas atlas   20406 Feb 23 08:57 log.43078919._087851.job.log.tgz.1
2025-02-23 09:59:32 (39733): Guest Log: -rw-------. 1 atlas atlas      95 Feb 23 08:58 pilot_heartbeat.json
2025-02-23 09:59:32 (39733): Guest Log: -rw-------. 1 atlas atlas    8427 Feb 23 08:59 heartbeat.json
2025-02-23 09:59:32 (39733): Guest Log: -rw-------. 1 atlas atlas    4900 Feb 23 08:59 pilotlog.txt
2025-02-23 09:59:32 (39733): Guest Log: -rw-------. 1 atlas atlas   77947 Feb 23 08:59 log.43078919._087851.job.log.1
2025-02-23 09:59:32 (39733): Guest Log: -rw-------. 1 atlas atlas     188 Feb 23 08:59 output.list
2025-02-23 09:59:32 (39733): Guest Log: -rw-r--r--. 1 atlas atlas     620 Feb 23 08:59 runtime_log
2025-02-23 09:59:32 (39733): Guest Log: -rw-------. 1 atlas atlas  122880 Feb 23 08:59 result.tar.gz
2025-02-23 09:59:32 (39733): Guest Log: -rw-------. 1 atlas atlas     651 Feb 23 08:59 Yx7LDmrm456nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmm4tKDmQdnGZm.diag
2025-02-23 09:59:32 (39733): Guest Log: -rw-r--r--. 1 atlas atlas   10815 Feb 23 08:59 runtime_log.err
2025-02-23 09:59:32 (39733): Guest Log: Looking for outputfile HITS.43078919._087851.pool.root.1
2025-02-23 09:59:32 (39733): Guest Log: No HITS file was produced
2025-02-23 09:59:32 (39733): Guest Log: Successfully finished the ATLAS job!
2025-02-23 09:59:32 (39733): Guest Log: Copying the results back to the shared directory!
2025-02-23 09:59:33 (39733): Guest Log:  *** Contents of shared directory: ***
2025-02-23 09:59:33 (39733): Guest Log: total 338308
2025-02-23 09:59:33 (39733): Guest Log: -rw-rw----. 1 root root 345764620 Feb 23 08:53 ATLAS.root_0
2025-02-23 09:59:33 (39733): Guest Log: -rw-rw-r--. 1 root root      8298 Feb 23 08:53 init_data.xml
2025-02-23 09:59:33 (39733): Guest Log: -rw-rw----. 1 root root    503553 Feb 23 08:53 input.tar.gz
2025-02-23 09:59:33 (39733): Guest Log: -rw-r--r--. 1 root root    122880 Feb 23  2025 result.tar.gz
2025-02-23 09:59:33 (39733): Guest Log: -rw-rw----. 1 root root     17569 Feb 23 08:53 start_atlas.sh
2025-02-23 09:59:33 (39733): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 09:59:33 (39733): VM Completion File Detected.
2025-02-23 09:59:33 (39733): Powering off VM.
2025-02-23 09:59:35 (39733): Successfully stopped VM.
2025-02-23 09:59:35 (39733): Deregistering VM. (boinc_d176ed6cb67db9c3, slot#2)
2025-02-23 09:59:35 (39733): Removing network bandwidth throttle group from VM.
2025-02-23 09:59:35 (39733): Removing VM from VirtualBox.
09:59:40 (39733): called boinc_finish(0)

</stderr_txt>
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