Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-22 23:35:46 (18404): Detected: vboxwrapper 26206
2025-02-22 23:35:46 (18404): Detected: BOINC client v8.0.4
2025-02-22 23:35:46 (18404): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-02-22 23:35:46 (18404): Successfully copied 'init_data.xml' to the shared directory.
2025-02-22 23:35:47 (18404): Create VM. (boinc_f171853d499dca31, slot#3)
2025-02-22 23:35:47 (18404): Setting Memory Size for VM. (4400MB)
2025-02-22 23:35:48 (18404): Setting CPU Count for VM. (4)
2025-02-22 23:35:48 (18404): Setting Chipset Options for VM.
2025-02-22 23:35:48 (18404): Setting Graphics Controller Options for VM.
2025-02-22 23:35:48 (18404): Setting Boot Options for VM.
2025-02-22 23:35:49 (18404): Setting Network Configuration for NAT.
2025-02-22 23:35:49 (18404): Enabling VM Network Access.
2025-02-22 23:35:49 (18404): Disabling USB Support for VM.
2025-02-22 23:35:49 (18404): Disabling COM Port Support for VM.
2025-02-22 23:35:50 (18404): Disabling LPT Port Support for VM.
2025-02-22 23:35:50 (18404): Disabling Audio Support for VM.
2025-02-22 23:35:50 (18404): Disabling Clipboard Support for VM.
2025-02-22 23:35:50 (18404): Disabling Drag and Drop Support for VM.
2025-02-22 23:35:51 (18404): Adding storage controller(s) to VM.
2025-02-22 23:35:51 (18404): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-22 23:35:51 (18404): Adding VirtualBox Guest Additions to VM.
2025-02-22 23:35:52 (18404): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-22 23:35:52 (18404): forwarding host port 53360 to guest port 80
2025-02-22 23:35:52 (18404): Enabling remote desktop for VM.
2025-02-22 23:35:52 (18404): Required extension pack not installed, remote desktop not enabled.
2025-02-22 23:35:52 (18404): Enabling shared directory for VM.
2025-02-22 23:35:53 (18404): Starting VM using VBoxManage interface. (boinc_f171853d499dca31, slot#3)
2025-02-22 23:35:57 (18404): Successfully started VM. (PID = '3244')
2025-02-22 23:35:57 (18404): Reporting VM Process ID to BOINC.
2025-02-22 23:35:57 (18404): Guest Log: BIOS: VirtualBox 7.1.4
2025-02-22 23:35:57 (18404): Guest Log: CPUID EDX: 0x178bfbff
2025-02-22 23:35:57 (18404): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-22 23:35:57 (18404): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-22 23:35:57 (18404): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-22 23:35:57 (18404): Detected: Web Application Enabled (http://localhost:53360)
2025-02-22 23:35:57 (18404): Preference change detected
2025-02-22 23:35:57 (18404): Setting CPU throttle for VM. (100%)
2025-02-22 23:35:58 (18404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-22 23:36:00 (18404): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-22 23:36:00 (18404): Guest Log: BIOS: Booting from Hard Disk...
2025-02-22 23:36:02 (18404): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-22 23:36:02 (18404): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-22 23:36:02 (18404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-22 23:36:11 (18404): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-22 23:36:11 (18404): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-22 23:36:19 (18404): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-22 23:36:19 (18404): Guest Log: 00:00:00.000107 main     Log opened 2025-02-22T23:36:16.822184000Z
2025-02-22 23:36:19 (18404): Guest Log: 00:00:00.000185 main     OS Product: Linux
2025-02-22 23:36:19 (18404): Guest Log: 00:00:00.000208 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-22 23:36:19 (18404): Guest Log: 00:00:00.000227 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-22 23:36:19 (18404): Guest Log: 00:00:00.000247 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-22 23:36:19 (18404): Guest Log: 00:00:00.000247 main     Process ID: 1308
2025-02-22 23:36:19 (18404): Guest Log: 00:00:00.000247 main     Package type: LINUX_64BITS_GENERIC
2025-02-22 23:36:19 (18404): Guest Log: 00:00:00.003794 main     5.2.32 r132073 started. Verbose level = 0
2025-02-22 23:36:19 (18404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-22 23:36:19 (18404): Guest Log: [INFO] Mounting shared directory
2025-02-22 23:36:19 (18404): Guest Log: [INFO] Checking for init_data.xml
2025-02-22 23:36:21 (18404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-22 23:36:21 (18404): Guest Log: [INFO] Detected branch: prod
2025-02-22 23:36:22 (18404): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-22 23:36:22 (18404): Guest Log: Copying input files
2025-02-22 23:36:25 (18404): Guest Log: Copied input files into RunAtlas.
2025-02-22 23:36:25 (18404): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-22 23:36:25 (18404): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-22 23:36:25 (18404): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-22 23:36:25 (18404): Guest Log: Further information can be found at the LHC@home message board.
2025-02-22 23:36:29 (18404): Guest Log: 00:00:10.029690 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 089 854 000ns (GuestNow=1 740 285 387 925 791 000 ns GuestLast=1 740 267 376 835 937 000 ns fSetTimeLastLoop=true )
2025-02-22 23:36:33 (18404): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-22 23:36:33 (18404): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-22 23:36:33 (18404): Guest Log: 2.6.3.0 1584 0 30144 142963 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-22 23:36:34 (18404): Guest Log: copied the webapp to /var/www
2025-02-22 23:36:34 (18404): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-22 23:36:34 (18404): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-22 23:36:34 (18404): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-22 23:36:34 (18404): Guest Log:  *** Starting ATLAS job. (PandaID=6523440109 taskID=43078919) ***
2025-02-22 23:48:01 (18404): Guest Log:  *** Job finished ***
2025-02-22 23:48:01 (18404): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:50,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:50,955 | INFO     | [job] queue monitor thread has finished
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:54,544 | INFO     | [data] queue_monitor thread has finished
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:54,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140465794959168)>', '<ExcThread(monitor, started 140465210906368)>']
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:55,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:55,219 | INFO     | [monitor] control thread has ended
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:59,664 | INFO     | all workflow threads have been joined
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:59,664 | INFO     | end of generic workflow (traces error code: 0)
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:59,664 | INFO     | traces error code: 0
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:59,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:59,767 [wrapper] ==== pilot stdout END ====
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:59,794 [wrapper] ==== wrapper stdout RESUME ====
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:59,819 [wrapper] pilotpid: 5906
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:59,841 [wrapper] Pilot exit status: 0
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:47:59,964 [wrapper] pandaids: 6523440109
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:48:00,089 [wrapper] cleanup supervisor_pilot  5912 5907
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:48:00,104 [wrapper] Test setup, not cleaning
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:48:00,148 [wrapper] apfmon messages muted
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:48:00,165 [wrapper] ==== wrapper stdout END ====
2025-02-22 23:48:01 (18404): Guest Log: 2025-02-23 04:48:00,192 [wrapper] ==== wrapper stderr END ====
2025-02-22 23:48:01 (18404): Guest Log:  *** Error codes and diagnostics ***
2025-02-22 23:48:01 (18404): Guest Log:     "exeErrorCode": 65,
2025-02-22 23:48:01 (18404): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-02-22 23:48:01 (18404): Guest Log:     "pilotErrorCode": 1305,
2025-02-22 23:48:01 (18404): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2025-02-23 04:45:15,246 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-02-22 23:48:01 (18404): Guest Log:  *** Listing of results directory ***
2025-02-22 23:48:01 (18404): Guest Log: total 3912
2025-02-22 23:48:01 (18404): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Feb 22 22:40 pilot3.tar.gz
2025-02-22 23:48:01 (18404): Guest Log: -rwx------. 1 atlas atlas   35865 Feb 22 22:48 runpilot2-wrapper.sh
2025-02-22 23:48:01 (18404): Guest Log: -rw-r--r--. 1 atlas atlas    5118 Feb 22 22:48 queuedata.json
2025-02-22 23:48:01 (18404): Guest Log: -rwxr-xr-x. 1 atlas atlas   10782 Feb 23 04:36 init_data.xml
2025-02-22 23:48:01 (18404): Guest Log: -rwxr-xr-x. 1 atlas atlas  503551 Feb 23 04:36 input.tar.gz
2025-02-22 23:48:01 (18404): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Feb 23 04:36 start_atlas.sh
2025-02-22 23:48:01 (18404): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb 23 04:36 EVNT.43078917._002582.pool.root.1 -> /data/./ATLAS.root_0
2025-02-22 23:48:01 (18404): Guest Log: -rw-r--r--. 1 atlas atlas    2546 Feb 23 04:36 pandaJob.out
2025-02-22 23:48:01 (18404): Guest Log: -rw-------. 1 atlas atlas     424 Feb 23 04:36 setup.sh.local
2025-02-22 23:48:01 (18404): Guest Log: -rw-------. 1 atlas atlas  987744 Feb 23 04:37 agis_schedconf.cvmfs.json
2025-02-22 23:48:01 (18404): Guest Log: -rw-------. 1 atlas atlas 1582569 Feb 23 04:37 agis_ddmendpoints.agis.ALL.json
2025-02-22 23:48:01 (18404): Guest Log: drwx------. 4 atlas atlas    4096 Feb 23 04:37 pilot3
2025-02-22 23:48:01 (18404): Guest Log: -rw-------. 1 atlas atlas    1003 Feb 23 04:45 memory_monitor_summary.json
2025-02-22 23:48:01 (18404): Guest Log: -rw-------. 1 atlas atlas   23216 Feb 23 04:45 log.43078919._089514.job.log.tgz.1
2025-02-22 23:48:01 (18404): Guest Log: -rw-------. 1 atlas atlas      95 Feb 23 04:47 pilot_heartbeat.json
2025-02-22 23:48:01 (18404): Guest Log: -rw-------. 1 atlas atlas    8496 Feb 23 04:47 heartbeat.json
2025-02-22 23:48:01 (18404): Guest Log: -rw-------. 1 atlas atlas    4398 Feb 23 04:47 pilotlog.txt
2025-02-22 23:48:01 (18404): Guest Log: -rw-------. 1 atlas atlas  107591 Feb 23 04:48 log.43078919._089514.job.log.1
2025-02-22 23:48:01 (18404): Guest Log: -rw-------. 1 atlas atlas     188 Feb 23 04:48 output.list
2025-02-22 23:48:01 (18404): Guest Log: -rw-r--r--. 1 atlas atlas     620 Feb 23 04:48 runtime_log
2025-02-22 23:48:01 (18404): Guest Log: -rw-------. 1 atlas atlas  153600 Feb 23 04:48 result.tar.gz
2025-02-22 23:48:01 (18404): Guest Log: -rw-r--r--. 1 atlas atlas   10748 Feb 23 04:48 runtime_log.err
2025-02-22 23:48:01 (18404): Guest Log: -rw-------. 1 atlas atlas     631 Feb 23 04:48 Qz8LDmlTD66n9Rq4apOajLDm4fhM0noT9bVoFjIUDm3YeKDmRzQlMn.diag
2025-02-22 23:48:01 (18404): Guest Log: Looking for outputfile HITS.43078919._089514.pool.root.1
2025-02-22 23:48:01 (18404): Guest Log: No HITS file was produced
2025-02-22 23:48:01 (18404): Guest Log: Successfully finished the ATLAS job!
2025-02-22 23:48:01 (18404): Guest Log: Copying the results back to the shared directory!
2025-02-22 23:48:01 (18404): Guest Log:  *** Contents of shared directory: ***
2025-02-22 23:48:01 (18404): Guest Log: total 336096
2025-02-22 23:48:01 (18404): Guest Log: -rwxrwxrwx. 1 root root 343469575 Feb 23 04:35 ATLAS.root_0
2025-02-22 23:48:01 (18404): Guest Log: -rwxrwxrwx. 1 root root     10782 Feb 23 04:35 init_data.xml
2025-02-22 23:48:01 (18404): Guest Log: -rwxrwxrwx. 1 root root    503551 Feb 23 04:35 input.tar.gz
2025-02-22 23:48:01 (18404): Guest Log: -rwxrwxrwx. 1 root root    153600 Feb 23 04:48 result.tar.gz
2025-02-22 23:48:01 (18404): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 04:35 start_atlas.sh
2025-02-22 23:48:01 (18404): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-22 23:48:01 (18404): VM Completion File Detected.
2025-02-22 23:48:01 (18404): Powering off VM.
2025-02-22 23:48:02 (18404): Successfully stopped VM.
2025-02-22 23:48:02 (18404): Deregistering VM. (boinc_f171853d499dca31, slot#3)
2025-02-22 23:48:02 (18404): Removing network bandwidth throttle group from VM.
2025-02-22 23:48:02 (18404): Removing VM from VirtualBox.
23:48:07 (18404): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN