Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:53:13 (2973562): wrapper (7.7.26015): starting
09:53:13 (2973562): wrapper: running run_atlas (--nthreads 4)
[2025-02-26 09:53:13] Arguments: --nthreads 4
[2025-02-26 09:53:13] Threads: 4
[2025-02-26 09:53:13] Checking for CVMFS
[2025-02-26 09:53:13] No cvmfs_config command found, will try listing directly
[2025-02-26 09:53:13] CVMFS is ok
[2025-02-26 09:53:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 09:53:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 09:53:13] Further information can be found at the LHC@home message board.
[2025-02-26 09:53:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 09:53:13] Checking for apptainer binary...
[2025-02-26 09:53:13] which: no apptainer in ((null))
[2025-02-26 09:53:13] apptainer is not installed, using version from CVMFS
[2025-02-26 09:53:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 09:53:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-02-26 09:53:13] apptainer works
[2025-02-26 09:53:13] Set ATHENA_PROC_NUMBER=4
[2025-02-26 09:53:13] Set ATHENA_CORE_NUMBER=4
[2025-02-26 09:53:13] Starting ATLAS job with PandaID=6523414620
[2025-02-26 09:53:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 15:08:12]  *** The last 200 lines of the pilot log: ***
[2025-02-26 15:08:12] 2025-02-26 14:07:59,000 | INFO     | model: linear, x: [1740560036.0, 1740560097.0, 1740560158.0, 1740560219.0, 1740560280.0, 1740560341.0, 1740560402.0, 1740560463.0, 1740560524.0, 1740560585.0, 1740
[2025-02-26 15:08:12] 2025-02-26 14:07:59,001 | INFO     | sum of square deviations: 8711530780.0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,003 | INFO     | sum of deviations: 161334887023.5001
[2025-02-26 15:08:12] 2025-02-26 14:07:59,003 | INFO     | mean x: 1740569277.5
[2025-02-26 15:08:12] 2025-02-26 14:07:59,003 | INFO     | mean y: 2327090.9177631577
[2025-02-26 15:08:12] 2025-02-26 14:07:59,003 | INFO     | -- intersect: -32232483854.907497
[2025-02-26 15:08:12] 2025-02-26 14:07:59,003 | INFO     | intersect: -32232483854.907497
[2025-02-26 15:08:12] 2025-02-26 14:07:59,004 | INFO     | chi2: 4.175625431629297
[2025-02-26 15:08:12] 2025-02-26 14:07:59,004 | INFO     | current chi2=4.175625431629297 (change=0.01781733404671724 %)
[2025-02-26 15:08:12] 2025-02-26 14:07:59,004 | INFO     | right removable region: 303
[2025-02-26 15:08:12] 2025-02-26 14:07:59,004 | INFO     | model: linear, x: [1740560341.0, 1740560402.0, 1740560463.0, 1740560524.0, 1740560585.0, 1740560646.0, 1740560707.0, 1740560768.0, 1740560829.0, 1740560890.0, 1740
[2025-02-26 15:08:12] 2025-02-26 14:07:59,004 | INFO     | sum of square deviations: 8711530780.0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,007 | INFO     | sum of deviations: 89515467419.0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,007 | INFO     | mean x: 1740569582.5
[2025-02-26 15:08:12] 2025-02-26 14:07:59,007 | INFO     | mean y: 2354125.4802631577
[2025-02-26 15:08:12] 2025-02-26 14:07:59,007 | INFO     | -- intersect: -17882895170.830112
[2025-02-26 15:08:12] 2025-02-26 14:07:59,007 | INFO     | intersect: -17882895170.830112
[2025-02-26 15:08:12] 2025-02-26 14:07:59,007 | INFO     | chi2: 1.622760299338621
[2025-02-26 15:08:12] 2025-02-26 14:07:59,007 | INFO     | current chi2=1.622760299338621 (change=61.14423591672028 %)
[2025-02-26 15:08:12] 2025-02-26 14:07:59,008 | INFO     | model: linear, x: [1740560646.0, 1740560707.0, 1740560768.0, 1740560829.0, 1740560890.0, 1740560951.0, 1740561012.0, 1740561073.0, 1740561134.0, 1740561195.0, 1740
[2025-02-26 15:08:12] 2025-02-26 14:07:59,011 | INFO     | sum of square deviations: 8288713550.0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,013 | INFO     | sum of deviations: 29207071632.999996
[2025-02-26 15:08:12] 2025-02-26 14:07:59,013 | INFO     | mean x: 1740569735.0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,013 | INFO     | mean y: 2375877.993311037
[2025-02-26 15:08:12] 2025-02-26 14:07:59,013 | INFO     | -- intersect: -6130897352.612761
[2025-02-26 15:08:12] 2025-02-26 14:07:59,013 | INFO     | intersect: -6130897352.612761
[2025-02-26 15:08:12] 2025-02-26 14:07:59,013 | INFO     | chi2: 0.09896993331464779
[2025-02-26 15:08:12] 2025-02-26 14:07:59,014 | INFO     | current chi2=0.09896993331464779 (change=93.9011366401443 %)
[2025-02-26 15:08:12] 2025-02-26 14:07:59,014 | INFO     | model: linear, x: [1740560951.0, 1740561012.0, 1740561073.0, 1740561134.0, 1740561195.0, 1740561256.0, 1740561317.0, 1740561378.0, 1740561439.0, 1740561500.0, 1740
[2025-02-26 15:08:12] 2025-02-26 14:07:59,014 | INFO     | sum of square deviations: 7879803557.5
[2025-02-26 15:08:12] 2025-02-26 14:07:59,016 | INFO     | sum of deviations: 15697264596.499996
[2025-02-26 15:08:12] 2025-02-26 14:07:59,016 | INFO     | mean x: 1740569887.5
[2025-02-26 15:08:12] 2025-02-26 14:07:59,016 | INFO     | mean y: 2380893.119047619
[2025-02-26 15:08:12] 2025-02-26 14:07:59,016 | INFO     | -- intersect: -3464988042.3390536
[2025-02-26 15:08:12] 2025-02-26 14:07:59,016 | INFO     | intersect: -3464988042.3390536
[2025-02-26 15:08:12] 2025-02-26 14:07:59,017 | INFO     | chi2: 0.004309832827265831
[2025-02-26 15:08:12] 2025-02-26 14:07:59,017 | INFO     | current chi2=0.004309832827265831 (change=95.64531097180404 %)
[2025-02-26 15:08:12] 2025-02-26 14:07:59,017 | INFO     | model: linear, x: [1740561256.0, 1740561317.0, 1740561378.0, 1740561439.0, 1740561500.0, 1740561561.0, 1740561622.0, 1740561683.0, 1740561744.0, 1740561805.0, 1740
[2025-02-26 15:08:12] 2025-02-26 14:07:59,017 | INFO     | sum of square deviations: 7484568240.0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,019 | INFO     | sum of deviations: 14573990862.999998
[2025-02-26 15:08:12] 2025-02-26 14:07:59,019 | INFO     | mean x: 1740570040.0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,019 | INFO     | mean y: 2381323.671280277
[2025-02-26 15:08:12] 2025-02-26 14:07:59,019 | INFO     | -- intersect: -3386865864.1359806
[2025-02-26 15:08:12] 2025-02-26 14:07:59,020 | INFO     | intersect: -3386865864.1359806
[2025-02-26 15:08:12] 2025-02-26 14:07:59,020 | INFO     | chi2: 0.003986043111127166
[2025-02-26 15:08:12] 2025-02-26 14:07:59,020 | INFO     | current chi2=0.003986043111127166 (change=7.512813817051868 %)
[2025-02-26 15:08:12] 2025-02-26 14:07:59,020 | INFO     | left removable region: 40
[2025-02-26 15:08:12] 2025-02-26 14:07:59,020 | INFO     | model: linear, x: [1740562476.0, 1740562537.0, 1740562598.0, 1740562659.0, 1740562720.0, 1740562781.0, 1740562842.0, 1740562903.0, 1740562964.0, 1740563025.0, 1740
[2025-02-26 15:08:12] 2025-02-26 14:07:59,020 | INFO     | sum of square deviations: 5640782972.0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,022 | INFO     | sum of deviations: 8426425075.999999
[2025-02-26 15:08:12] 2025-02-26 14:07:59,022 | INFO     | mean x: 1740570467.0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,022 | INFO     | mean y: 2383646.988593156
[2025-02-26 15:08:12] 2025-02-26 14:07:59,022 | INFO     | -- intersect: -2597749473.267505
[2025-02-26 15:08:12] 2025-02-26 14:07:59,022 | INFO     | intersect: -2597749473.267505
[2025-02-26 15:08:12] 2025-02-26 14:07:59,023 | INFO     | chi2: 0.001714008633405973
[2025-02-26 15:08:12] 2025-02-26 14:07:59,023 | INFO     | -- intersect: -2597749473.267505
[2025-02-26 15:08:12] 2025-02-26 14:07:59,023 | INFO     | current memory leak: 1.49 B/s (using 263 data points, chi2=0.00)
[2025-02-26 15:08:12] 2025-02-26 14:07:59,023 | INFO     | ..............................
[2025-02-26 15:08:12] 2025-02-26 14:07:59,023 | INFO     | . Timing measurements:
[2025-02-26 15:08:12] 2025-02-26 14:07:59,023 | INFO     | . get job = 0 s
[2025-02-26 15:08:12] 2025-02-26 14:07:59,023 | INFO     | . initial setup = 1 s
[2025-02-26 15:08:12] 2025-02-26 14:07:59,024 | INFO     | . payload setup = 7 s
[2025-02-26 15:08:12] 2025-02-26 14:07:59,024 | INFO     | . stage-in = 0 s
[2025-02-26 15:08:12] 2025-02-26 14:07:59,024 | INFO     | . payload execution = 18833 s
[2025-02-26 15:08:12] 2025-02-26 14:07:59,024 | INFO     | . stage-out = 1 s
[2025-02-26 15:08:12] 2025-02-26 14:07:59,024 | INFO     | . log creation = 0 s
[2025-02-26 15:08:12] 2025-02-26 14:07:59,024 | INFO     | ..............................
[2025-02-26 15:08:12] 2025-02-26 14:07:59,281 | INFO     | 
[2025-02-26 15:08:12] 2025-02-26 14:07:59,281 | INFO     | job summary report
[2025-02-26 15:08:12] 2025-02-26 14:07:59,281 | INFO     | --------------------------------------------------
[2025-02-26 15:08:12] 2025-02-26 14:07:59,281 | INFO     | PanDA job id: 6523414620
[2025-02-26 15:08:12] 2025-02-26 14:07:59,281 | INFO     | task id: 43078919
[2025-02-26 15:08:12] 2025-02-26 14:07:59,281 | INFO     | errors: (none)
[2025-02-26 15:08:12] 2025-02-26 14:07:59,281 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 15:08:12] 2025-02-26 14:07:59,282 | INFO     | pilot state: finished 
[2025-02-26 15:08:12] 2025-02-26 14:07:59,282 | INFO     | transexitcode: 0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,282 | INFO     | exeerrorcode: 0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,282 | INFO     | exeerrordiag: 
[2025-02-26 15:08:12] 2025-02-26 14:07:59,282 | INFO     | exitcode: 0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,282 | INFO     | exitmsg: OK
[2025-02-26 15:08:12] 2025-02-26 14:07:59,282 | INFO     | cpuconsumptiontime: 72338 s
[2025-02-26 15:08:12] 2025-02-26 14:07:59,282 | INFO     | nevents: 400
[2025-02-26 15:08:12] 2025-02-26 14:07:59,282 | INFO     | neventsw: 0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,282 | INFO     | pid: 2987242
[2025-02-26 15:08:12] 2025-02-26 14:07:59,282 | INFO     | pgrp: 2987242
[2025-02-26 15:08:12] 2025-02-26 14:07:59,282 | INFO     | corecount: 4
[2025-02-26 15:08:12] 2025-02-26 14:07:59,283 | INFO     | event service: False
[2025-02-26 15:08:12] 2025-02-26 14:07:59,283 | INFO     | sizes: {0: 2362940, 1: 2363807, 7: 2364013, 12: 2364041, 18844: 2396217, 18845: 2396216, 18846: 2405363, 18849: 2405419, 18857: 2405589}
[2025-02-26 15:08:12] 2025-02-26 14:07:59,283 | INFO     | --------------------------------------------------
[2025-02-26 15:08:12] 2025-02-26 14:07:59,283 | INFO     | 
[2025-02-26 15:08:12] 2025-02-26 14:07:59,283 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2025-02-26 15:08:12] 2025-02-26 14:07:59,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,310 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 15:08:12] 2025-02-26 14:07:59,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,310 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 15:08:12] 2025-02-26 14:07:59,310 | INFO     | job 6523414620 has completed (purged errors)
[2025-02-26 15:08:12] 2025-02-26 14:07:59,310 | INFO     | overall cleanup function is called
[2025-02-26 15:08:12] 2025-02-26 14:08:00,318 | INFO     | --- collectZombieJob: --- 10, [2987242]
[2025-02-26 15:08:12] 2025-02-26 14:08:00,318 | INFO     | zombie collector waiting for pid 2987242
[2025-02-26 15:08:12] 2025-02-26 14:08:00,318 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 15:08:12] 2025-02-26 14:08:00,319 | INFO     | collected zombie processes
[2025-02-26 15:08:12] 2025-02-26 14:08:00,319 | INFO     | will attempt to kill all subprocesses of pid=2987242
[2025-02-26 15:08:12] 2025-02-26 14:08:00,541 | INFO     | process IDs to be killed: [2987242] (in reverse order)
[2025-02-26 15:08:12] 2025-02-26 14:08:00,777 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 15:08:12] 2025-02-26 14:08:00,777 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 15:08:12] 2025-02-26 14:08:00,798 | INFO     | did not find any defunct processes belonging to 2987242
[2025-02-26 15:08:12] 2025-02-26 14:08:00,815 | INFO     | did not find any defunct processes belonging to 2987242
[2025-02-26 15:08:12] 2025-02-26 14:08:00,815 | INFO     | ready for new job
[2025-02-26 15:08:12] 2025-02-26 14:08:00,815 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 15:08:12] 2025-02-26 14:08:00,818 | INFO     | **************************************
[2025-02-26 15:08:12] 2025-02-26 14:08:00,818 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 15:08:12] 2025-02-26 14:08:00,818 | INFO     | **************************************
[2025-02-26 15:08:12] 2025-02-26 14:08:00,818 | INFO     | 
[2025-02-26 15:08:12] 2025-02-26 14:08:00,826 | INFO     | architecture information:
[2025-02-26 15:08:12] 2025-02-26 14:08:00,826 | INFO     | executing command: cat /etc/os-release
[2025-02-26 15:08:12] 2025-02-26 14:08:00,843 | INFO     | cat /etc/os-release:
[2025-02-26 15:08:12] NAME="CentOS Linux"
[2025-02-26 15:08:12] VERSION="7 (Core)"
[2025-02-26 15:08:12] ID="centos"
[2025-02-26 15:08:12] ID_LIKE="rhel fedora"
[2025-02-26 15:08:12] VERSION_ID="7"
[2025-02-26 15:08:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 15:08:12] ANSI_COLOR="0;31"
[2025-02-26 15:08:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 15:08:12] HOME_URL="https://www.centos.org/"
[2025-02-26 15:08:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 15:08:12] 
[2025-02-26 15:08:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 15:08:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 15:08:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 15:08:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 15:08:12] 
[2025-02-26 15:08:12] 2025-02-26 14:08:00,843 | INFO     | **************************************
[2025-02-26 15:08:12] 2025-02-26 14:08:01,345 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2025-02-26 15:08:12] 2025-02-26 14:08:01,368 | INFO     | sufficient remaining disk space (3309173735424 B)
[2025-02-26 15:08:12] 2025-02-26 14:08:01,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 15:08:12] 2025-02-26 14:08:01,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 15:08:12] 2025-02-26 14:08:01,369 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 15:08:12] 2025-02-26 14:08:01,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 15:08:12] 2025-02-26 14:08:01,370 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 15:08:12] 2025-02-26 14:08:01,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 15:08:12] 2025-02-26 14:08:01,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 15:08:12] 2025-02-26 14:08:01,420 | INFO     | all job control threads have been joined
[2025-02-26 15:08:12] 2025-02-26 14:08:01,540 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-26 15:08:12] 2025-02-26 14:08:01,540 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-26 15:08:12] 2025-02-26 14:08:01,540 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 15:08:12] 2025-02-26 14:08:01,540 | INFO     | will abort loop
[2025-02-26 15:08:12] 2025-02-26 14:08:01,599 | INFO     | all payload control threads have been joined
[2025-02-26 15:08:12] 2025-02-26 14:08:02,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 15:08:12] 2025-02-26 14:08:02,264 | INFO     | all data control threads have been joined
[2025-02-26 15:08:12] 2025-02-26 14:08:02,374 | INFO     | [job] retrieve thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:02,426 | INFO     | [job] control thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:02,544 | INFO     | [payload] validate_post thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:02,545 | INFO     | [job] job monitor thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:02,605 | INFO     | [payload] control thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:02,748 | INFO     | [job] validate thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:02,937 | INFO     | [payload] failed_post thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:02,976 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:03,221 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:03,270 | INFO     | [data] control thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:03,375 | INFO     | [data] copytool_out thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:03,418 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:03,482 | INFO     | [data] copytool_in thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:03,848 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:04,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 15:08:12] 2025-02-26 14:08:05,126 | INFO     | [job] queue monitor thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:06,197 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 15:08:12] 2025-02-26 14:08:07,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23379208152896)>', '<ExcThread(monitor, started 23378903668480)>']
[2025-02-26 15:08:12] 2025-02-26 14:08:07,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 15:08:12] 2025-02-26 14:08:07,397 | INFO     | [monitor] control thread has ended
[2025-02-26 15:08:12] 2025-02-26 14:08:12,321 | INFO     | all workflow threads have been joined
[2025-02-26 15:08:12] 2025-02-26 14:08:12,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 15:08:12] 2025-02-26 14:08:12,322 | INFO     | traces error code: 0
[2025-02-26 15:08:12] 2025-02-26 14:08:12,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 15:08:12] 2025-02-26 14:08:12,455 [wrapper] ==== pilot stdout END ====
[2025-02-26 15:08:12] 2025-02-26 14:08:12,461 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 15:08:12] 2025-02-26 14:08:12,464 [wrapper] pilotpid: 2978043
[2025-02-26 15:08:12] 2025-02-26 14:08:12,467 [wrapper] Pilot exit status: 0
[2025-02-26 15:08:12] 2025-02-26 14:08:12,481 [wrapper] pandaids: 6523414620
[2025-02-26 15:08:12] 2025-02-26 14:08:12,602 [wrapper] cleanup supervisor_pilot  108899 2978044
[2025-02-26 15:08:12] 2025-02-26 14:08:12,605 [wrapper] Test setup, not cleaning
[2025-02-26 15:08:12] 2025-02-26 14:08:12,612 [wrapper] apfmon messages muted
[2025-02-26 15:08:12] 2025-02-26 14:08:12,616 [wrapper] ==== wrapper stdout END ====
[2025-02-26 15:08:12] 2025-02-26 14:08:12,619 [wrapper] ==== wrapper stderr END ====
[2025-02-26 15:08:12]  *** Error codes and diagnostics ***
[2025-02-26 15:08:12]     "exeErrorCode": 0,
[2025-02-26 15:08:12]     "exeErrorDiag": "",
[2025-02-26 15:08:12]     "pilotErrorCode": 0,
[2025-02-26 15:08:12]     "pilotErrorDiag": "",
[2025-02-26 15:08:12]  *** Listing of results directory ***
[2025-02-26 15:08:12] total 671268
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc    491065 Feb 22 22:37 pilot3.tar.gz
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc      5118 Feb 22 22:43 queuedata.json
[2025-02-26 15:08:12] -rwx------ 1 boinc boinc     35865 Feb 22 22:44 runpilot2-wrapper.sh
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc       100 Feb 26 09:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 15:08:12] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 09:53 run_atlas
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc       105 Feb 26 09:53 job.xml
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc      6672 Feb 26 09:53 init_data.xml
[2025-02-26 15:08:12] -rw-r--r-- 2 boinc boinc 342979673 Feb 26 09:53 EVNT.43078917._002571.pool.root.1
[2025-02-26 15:08:12] -rw-r--r-- 2 boinc boinc     17569 Feb 26 09:53 start_atlas.sh
[2025-02-26 15:08:12] drwxrwx--x 2 boinc boinc      4096 Feb 26 09:53 shared
[2025-02-26 15:08:12] -rw-r--r-- 2 boinc boinc    503560 Feb 26 09:53 input.tar.gz
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc         0 Feb 26 09:53 boinc_lockfile
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc      2545 Feb 26 09:53 pandaJob.out
[2025-02-26 15:08:12] -rw------- 1 boinc boinc       424 Feb 26 09:53 setup.sh.local
[2025-02-26 15:08:12] -rw------- 1 boinc boinc    986636 Feb 26 09:53 agis_schedconf.cvmfs.json
[2025-02-26 15:08:12] drwx------ 4 boinc boinc      4096 Feb 26 09:53 pilot3
[2025-02-26 15:08:12] -rw------- 1 boinc boinc 335753130 Feb 26 15:07 HITS.43078919._089148.pool.root.1
[2025-02-26 15:08:12] -rw------- 1 boinc boinc        95 Feb 26 15:07 pilot_heartbeat.json
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc       531 Feb 26 15:07 boinc_task_state.xml
[2025-02-26 15:08:12] -rw------- 1 boinc boinc      1024 Feb 26 15:07 memory_monitor_summary.json
[2025-02-26 15:08:12] -rw------- 1 boinc boinc   1569202 Feb 26 15:07 agis_ddmendpoints.agis.ALL.json
[2025-02-26 15:08:12] -rw------- 1 boinc boinc    392261 Feb 26 15:07 log.43078919._089148.job.log.tgz.1
[2025-02-26 15:08:12] -rw------- 1 boinc boinc      7693 Feb 26 15:07 heartbeat.json
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc        28 Feb 26 15:08 wrapper_checkpoint.txt
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc      8192 Feb 26 15:08 boinc_mmap_file
[2025-02-26 15:08:12] -rw------- 1 boinc boinc      4535 Feb 26 15:08 pilotlog.txt
[2025-02-26 15:08:12] -rw------- 1 boinc boinc   2036016 Feb 26 15:08 log.43078919._089148.job.log.1
[2025-02-26 15:08:12] -rw------- 1 boinc boinc       357 Feb 26 15:08 output.list
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc       620 Feb 26 15:08 runtime_log
[2025-02-26 15:08:12] -rw------- 1 boinc boinc   2447360 Feb 26 15:08 result.tar.gz
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc     11424 Feb 26 15:08 runtime_log.err
[2025-02-26 15:08:12] -rw------- 1 boinc boinc       666 Feb 26 15:08 L1MKDmXTC66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHduKDm4Fj0dm.diag
[2025-02-26 15:08:12] -rw-r--r-- 1 boinc boinc     21433 Feb 26 15:08 stderr.txt
[2025-02-26 15:08:12] HITS file was successfully produced:
[2025-02-26 15:08:12] -rw------- 1 boinc boinc 335753130 Feb 26 15:07 shared/HITS.pool.root.1
[2025-02-26 15:08:12]  *** Contents of shared directory: ***
[2025-02-26 15:08:12] total 665736
[2025-02-26 15:08:12] -rw-r--r-- 2 boinc boinc 342979673 Feb 26 09:53 ATLAS.root_0
[2025-02-26 15:08:12] -rw-r--r-- 2 boinc boinc     17569 Feb 26 09:53 start_atlas.sh
[2025-02-26 15:08:12] -rw-r--r-- 2 boinc boinc    503560 Feb 26 09:53 input.tar.gz
[2025-02-26 15:08:12] -rw------- 1 boinc boinc 335753130 Feb 26 15:07 HITS.pool.root.1
[2025-02-26 15:08:12] -rw------- 1 boinc boinc   2447360 Feb 26 15:08 result.tar.gz
15:08:14 (2973562): run_atlas exited; CPU time 72089.752374
15:08:14 (2973562): called boinc_finish(0)

</stderr_txt>
]]>

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