Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 23:51:23 (4152): Detected: vboxwrapper 26206
2025-02-23 23:51:23 (4152): Detected: BOINC client v8.0.2
2025-02-23 23:51:24 (4152): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-23 23:51:24 (4152): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 23:51:24 (4152): Create VM. (boinc_d9d76313b3057d6d, slot#1)
2025-02-23 23:51:25 (4152): Setting Memory Size for VM. (4800MB)
2025-02-23 23:51:25 (4152): Setting CPU Count for VM. (8)
2025-02-23 23:51:25 (4152): Setting Chipset Options for VM.
2025-02-23 23:51:26 (4152): Setting Graphics Controller Options for VM.
2025-02-23 23:51:26 (4152): Setting Boot Options for VM.
2025-02-23 23:51:26 (4152): Setting Network Configuration for NAT.
2025-02-23 23:51:26 (4152): Enabling VM Network Access.
2025-02-23 23:51:27 (4152): Disabling USB Support for VM.
2025-02-23 23:51:27 (4152): Disabling COM Port Support for VM.
2025-02-23 23:51:27 (4152): Disabling LPT Port Support for VM.
2025-02-23 23:51:28 (4152): Disabling Audio Support for VM.
2025-02-23 23:51:28 (4152): Disabling Clipboard Support for VM.
2025-02-23 23:51:28 (4152): Disabling Drag and Drop Support for VM.
2025-02-23 23:51:28 (4152): Adding storage controller(s) to VM.
2025-02-23 23:51:29 (4152): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 23:51:29 (4152): Adding VirtualBox Guest Additions to VM.
2025-02-23 23:51:29 (4152): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 23:51:30 (4152): forwarding host port 62358 to guest port 80
2025-02-23 23:51:30 (4152): Enabling remote desktop for VM.
2025-02-23 23:51:30 (4152): Required extension pack not installed, remote desktop not enabled.
2025-02-23 23:51:30 (4152): Enabling shared directory for VM.
2025-02-23 23:51:31 (4152): Starting VM using VBoxManage interface. (boinc_d9d76313b3057d6d, slot#1)
2025-02-23 23:51:36 (4152): Successfully started VM. (PID = '7432')
2025-02-23 23:51:36 (4152): Reporting VM Process ID to BOINC.
2025-02-23 23:51:36 (4152): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-23 23:51:36 (4152): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 23:51:36 (4152): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 23:51:36 (4152): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 23:51:36 (4152): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 23:51:36 (4152): Detected: Web Application Enabled (http://localhost:62358)
2025-02-23 23:51:36 (4152): Preference change detected
2025-02-23 23:51:36 (4152): Setting CPU throttle for VM. (100%)
2025-02-23 23:51:36 (4152): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 23:51:38 (4152): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 23:51:38 (4152): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 23:51:40 (4152): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 23:51:40 (4152): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 23:51:40 (4152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 23:51:46 (4152): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 23:51:46 (4152): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 23:51:51 (4152): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 23:51:51 (4152): Guest Log: 00:00:00.000069 main     Log opened 2025-02-23T23:51:49.314495000Z
2025-02-23 23:51:51 (4152): Guest Log: 00:00:00.000126 main     OS Product: Linux
2025-02-23 23:51:51 (4152): Guest Log: 00:00:00.000146 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 23:51:51 (4152): Guest Log: 00:00:00.000161 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 23:51:51 (4152): Guest Log: 00:00:00.000175 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 23:51:51 (4152): Guest Log: 00:00:00.000175 main     Process ID: 1366
2025-02-23 23:51:51 (4152): Guest Log: 00:00:00.000176 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 23:51:51 (4152): Guest Log: 00:00:00.000627 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 23:51:51 (4152): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 23:51:51 (4152): Guest Log: [INFO] Mounting shared directory
2025-02-23 23:51:51 (4152): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 23:51:55 (4152): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 23:51:55 (4152): Guest Log: [INFO] Detected branch: prod
2025-02-23 23:51:55 (4152): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 23:51:55 (4152): Guest Log: Copying input files
2025-02-23 23:51:58 (4152): Guest Log: Copied input files into RunAtlas.
2025-02-23 23:51:58 (4152): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 23:51:58 (4152): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 23:51:58 (4152): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 23:51:58 (4152): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 23:52:01 (4152): Guest Log: 00:00:10.002507 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 577 150 000ns (GuestNow=1 740 351 120 738 872 000 ns GuestLast=1 740 354 709 316 022 000 ns fSetTimeLastLoop=true )
2025-02-23 23:52:08 (4152): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 23:52:08 (4152): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 23:52:08 (4152): Guest Log: 2.6.3.0 1646 0 32156 142990 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 23:52:08 (4152): Guest Log: copied the webapp to /var/www
2025-02-23 23:52:09 (4152): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-23 23:52:09 (4152): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-23 23:52:09 (4152): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 23:52:09 (4152): Guest Log:  *** Starting ATLAS job. (PandaID=6523022416 taskID=43078919) ***
2025-02-24 01:33:02 (4152): Status Report: Elapsed Time: '6000.000000'
2025-02-24 01:33:02 (4152): Status Report: CPU Time: '39918.796875'
2025-02-24 03:14:06 (4152): Guest Log:  *** Job finished ***
2025-02-24 03:14:06 (4152): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:48,967 | INFO     | [job] validate thread has finished
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:50,138 | INFO     | [data] copytool_out thread has finished
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:51,866 | INFO     | [data] queue_monitor thread has finished
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:53,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140480484312896)>', '<ExcThread(monitor, started 140479320553216)>']
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:53,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:53,482 | INFO     | [monitor] control thread has ended
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,443 | INFO     | all workflow threads have been joined
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,444 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,444 | INFO     | traces error code: 0
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,522 [wrapper] ==== pilot stdout END ====
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,525 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,528 [wrapper] pilotpid: 6007
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,530 [wrapper] Pilot exit status: 0
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,603 [wrapper] pandaids: 6523022416
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,624 [wrapper] cleanup supervisor_pilot 12120 6008
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,627 [wrapper] Test setup, not cleaning
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,636 [wrapper] apfmon messages muted
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,639 [wrapper] ==== wrapper stdout END ====
2025-02-24 03:14:06 (4152): Guest Log: 2025-02-24 02:13:58,643 [wrapper] ==== wrapper stderr END ====
2025-02-24 03:14:06 (4152): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 03:14:06 (4152): Guest Log:     "exeErrorCode": 0,
2025-02-24 03:14:06 (4152): Guest Log:     "exeErrorDiag": "",
2025-02-24 03:14:06 (4152): Guest Log:     "pilotErrorCode": 0,
2025-02-24 03:14:06 (4152): Guest Log:     "pilotErrorDiag": "",
2025-02-24 03:14:06 (4152): Guest Log:  *** Listing of results directory ***
2025-02-24 03:14:06 (4152): Guest Log: total 321564
2025-02-24 03:14:06 (4152): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 22 14:34 pilot3.tar.gz
2025-02-24 03:14:06 (4152): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 22 14:58 runpilot2-wrapper.sh
2025-02-24 03:14:06 (4152): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 22 14:58 queuedata.json
2025-02-24 03:14:06 (4152): Guest Log: -rwxr-xr-x. 1 atlas atlas    503553 Feb 23 22:51 input.tar.gz
2025-02-24 03:14:06 (4152): Guest Log: -rwxr-xr-x. 1 atlas atlas      9055 Feb 23 22:51 init_data.xml
2025-02-24 03:14:06 (4152): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 23 22:51 start_atlas.sh
2025-02-24 03:14:06 (4152): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 23 22:51 EVNT.43078917._002556.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 03:14:06 (4152): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Feb 23 22:52 pandaJob.out
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas       424 Feb 23 22:52 setup.sh.local
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas    987744 Feb 23 22:52 agis_schedconf.cvmfs.json
2025-02-24 03:14:06 (4152): Guest Log: drwx------. 4 atlas atlas      4096 Feb 23 22:52 pilot3
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas 322689105 Feb 24 02:13 HITS.43078919._088178.pool.root.1
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas      1028 Feb 24 02:13 memory_monitor_summary.json
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 02:13 pilot_heartbeat.json
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 24 02:13 agis_ddmendpoints.agis.ALL.json
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas    382814 Feb 24 02:13 log.43078919._088178.job.log.tgz.1
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas      7711 Feb 24 02:13 heartbeat.json
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 24 02:13 pilotlog.txt
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas   1044730 Feb 24 02:13 log.43078919._088178.job.log.1
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 02:13 output.list
2025-02-24 03:14:06 (4152): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 02:13 runtime_log
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas   1443840 Feb 24 02:13 result.tar.gz
2025-02-24 03:14:06 (4152): Guest Log: -rw-r--r--. 1 atlas atlas     10912 Feb 24 02:13 runtime_log.err
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas       648 Feb 24 02:13 HtcMDm48556nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmkBuKDmAddD5m.diag
2025-02-24 03:14:06 (4152): Guest Log: Looking for outputfile HITS.43078919._088178.pool.root.1
2025-02-24 03:14:06 (4152): Guest Log: HITS file was successfully produced
2025-02-24 03:14:06 (4152): Guest Log: -rw-------. 1 atlas atlas 322689105 Feb 24 02:13 /home/atlas/RunAtlas/HITS.43078919._088178.pool.root.1
2025-02-24 03:14:07 (4152): Guest Log: Successfully finished the ATLAS job!
2025-02-24 03:14:07 (4152): Guest Log: Copying the results back to the shared directory!
2025-02-24 03:14:07 (4152): Guest Log:  *** Contents of shared directory: ***
2025-02-24 03:14:07 (4152): Guest Log: total 655636
2025-02-24 03:14:07 (4152): Guest Log: -rwxrwxrwx. 1 root root 346696348 Feb 23 22:51 ATLAS.root_0
2025-02-24 03:14:07 (4152): Guest Log: -rwxrwxrwx. 1 root root 322689105 Feb 24  2025 HITS.pool.root.1
2025-02-24 03:14:07 (4152): Guest Log: -rwxrwxrwx. 1 root root      9055 Feb 23 22:51 init_data.xml
2025-02-24 03:14:07 (4152): Guest Log: -rwxrwxrwx. 1 root root    503553 Feb 23 02:35 input.tar.gz
2025-02-24 03:14:07 (4152): Guest Log: -rwxrwxrwx. 1 root root   1443840 Feb 24  2025 result.tar.gz
2025-02-24 03:14:07 (4152): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 02:35 start_atlas.sh
2025-02-24 03:14:07 (4152): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 03:14:07 (4152): VM Completion File Detected.
2025-02-24 03:14:07 (4152): Powering off VM.
2025-02-24 03:14:08 (4152): Successfully stopped VM.
2025-02-24 03:14:08 (4152): Deregistering VM. (boinc_d9d76313b3057d6d, slot#1)
2025-02-24 03:14:08 (4152): Removing network bandwidth throttle group from VM.
2025-02-24 03:14:08 (4152): Removing VM from VirtualBox.
03:14:13 (4152): called boinc_finish(0)

</stderr_txt>
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