Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-24 06:22:56 (15088): Detected: vboxwrapper 26206
2025-02-24 06:22:56 (15088): Detected: BOINC client v8.0.4
2025-02-24 06:22:57 (15088): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-02-24 06:22:57 (15088): Successfully copied 'init_data.xml' to the shared directory.
2025-02-24 06:22:57 (15088): Create VM. (boinc_64020509827550d0, slot#3)
2025-02-24 06:22:58 (15088): Setting Memory Size for VM. (4700MB)
2025-02-24 06:22:58 (15088): Setting CPU Count for VM. (7)
2025-02-24 06:22:59 (15088): Setting Chipset Options for VM.
2025-02-24 06:22:59 (15088): Setting Graphics Controller Options for VM.
2025-02-24 06:22:59 (15088): Setting Boot Options for VM.
2025-02-24 06:22:59 (15088): Setting Network Configuration for NAT.
2025-02-24 06:23:00 (15088): Enabling VM Network Access.
2025-02-24 06:23:00 (15088): Disabling USB Support for VM.
2025-02-24 06:23:00 (15088): Disabling COM Port Support for VM.
2025-02-24 06:23:00 (15088): Disabling LPT Port Support for VM.
2025-02-24 06:23:01 (15088): Disabling Audio Support for VM.
2025-02-24 06:23:01 (15088): Disabling Clipboard Support for VM.
2025-02-24 06:23:01 (15088): Disabling Drag and Drop Support for VM.
2025-02-24 06:23:01 (15088): Adding storage controller(s) to VM.
2025-02-24 06:23:02 (15088): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-24 06:23:02 (15088): Adding VirtualBox Guest Additions to VM.
2025-02-24 06:23:02 (15088): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-24 06:23:03 (15088): forwarding host port 3629 to guest port 80
2025-02-24 06:23:03 (15088): Enabling remote desktop for VM.
2025-02-24 06:23:03 (15088): Required extension pack not installed, remote desktop not enabled.
2025-02-24 06:23:03 (15088): Enabling shared directory for VM.
2025-02-24 06:23:04 (15088): Starting VM using VBoxManage interface. (boinc_64020509827550d0, slot#3)
2025-02-24 06:23:08 (15088): Successfully started VM. (PID = '468')
2025-02-24 06:23:08 (15088): Reporting VM Process ID to BOINC.
2025-02-24 06:23:08 (15088): Guest Log: BIOS: VirtualBox 7.1.6
2025-02-24 06:23:08 (15088): Guest Log: CPUID EDX: 0x178bfbff
2025-02-24 06:23:08 (15088): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-24 06:23:08 (15088): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-24 06:23:08 (15088): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-24 06:23:08 (15088): Detected: Web Application Enabled (http://localhost:3629)
2025-02-24 06:23:08 (15088): Preference change detected
2025-02-24 06:23:08 (15088): Setting CPU throttle for VM. (100%)
2025-02-24 06:23:09 (15088): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 06:23:10 (15088): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-24 06:23:10 (15088): Guest Log: BIOS: Booting from Hard Disk...
2025-02-24 06:23:13 (15088): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-24 06:23:13 (15088): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-24 06:23:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-24 06:23:19 (15088): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-24 06:23:19 (15088): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-24 06:23:23 (15088): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-24 06:23:23 (15088): Guest Log: 00:00:00.000121 main     Log opened 2025-02-24T06:23:21.090859000Z
2025-02-24 06:23:23 (15088): Guest Log: 00:00:00.000222 main     OS Product: Linux
2025-02-24 06:23:23 (15088): Guest Log: 00:00:00.000246 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-24 06:23:23 (15088): Guest Log: 00:00:00.000261 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-24 06:23:23 (15088): Guest Log: 00:00:00.000275 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-24 06:23:23 (15088): Guest Log: 00:00:00.000275 main     Process ID: 1358
2025-02-24 06:23:23 (15088): Guest Log: 00:00:00.000275 main     Package type: LINUX_64BITS_GENERIC
2025-02-24 06:23:23 (15088): Guest Log: 00:00:00.000816 main     5.2.32 r132073 started. Verbose level = 0
2025-02-24 06:23:23 (15088): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-24 06:23:23 (15088): Guest Log: [INFO] Mounting shared directory
2025-02-24 06:23:23 (15088): Guest Log: [INFO] Checking for init_data.xml
2025-02-24 06:23:31 (15088): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-24 06:23:31 (15088): Guest Log: [INFO] Detected branch: prod
2025-02-24 06:23:32 (15088): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-24 06:23:32 (15088): Guest Log: Copying input files
2025-02-24 06:23:33 (15088): Guest Log: 00:00:10.003383 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 787 930 621 000ns (GuestNow=1 740 349 413 161 725 000 ns GuestLast=1 740 378 201 092 346 000 ns fSetTimeLastLoop=true )
2025-02-24 06:23:33 (15088): Guest Log: Copied input files into RunAtlas.
2025-02-24 06:23:33 (15088): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-24 06:23:33 (15088): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-24 06:23:33 (15088): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-24 06:23:33 (15088): Guest Log: Further information can be found at the LHC@home message board.
2025-02-24 06:23:43 (15088): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-24 06:23:44 (15088): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-24 06:23:44 (15088): Guest Log: 2.6.3.0 1637 0 30180 142990 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-24 06:23:44 (15088): Guest Log: copied the webapp to /var/www
2025-02-24 06:23:44 (15088): Guest Log: ATHENA_PROC_NUMBER=7
2025-02-24 06:23:44 (15088): Guest Log: ATHENA_CORE_NUMBER=7
2025-02-24 06:23:45 (15088): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-24 06:23:45 (15088): Guest Log:  *** Starting ATLAS job. (PandaID=6523022890 taskID=43205075) ***
2025-02-24 08:03:11 (15088): Status Report: Elapsed Time: '6000.000000'
2025-02-24 08:03:11 (15088): Status Report: CPU Time: '28375.953125'
2025-02-24 08:51:44 (15088): VM state change detected. (old = 'running', new = 'paused')
2025-02-24 09:14:56 (15088): VM state change detected. (old = 'paused', new = 'running')
2025-02-24 09:23:01 (15088): Guest Log:  *** Job finished ***
2025-02-24 09:23:01 (15088): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:21:56,899 | INFO     | [data] queue_monitor thread has finished
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:03,545 | INFO     | job.realtimelogging is not enabled
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:04,697 | INFO     | [payload] run_realtimelog thread has finished
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:05,117 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140628409931584)>', '<ExcThread(monitor, started 140627715004160)>']
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:05,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:05,552 | INFO     | [monitor] control thread has ended
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,122 | INFO     | all workflow threads have been joined
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,122 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,122 | INFO     | traces error code: 0
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,194 [wrapper] ==== pilot stdout END ====
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,198 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,203 [wrapper] pilotpid: 6019
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,208 [wrapper] Pilot exit status: 0
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,666 [wrapper] pandaids: 6523022890
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,693 [wrapper] cleanup supervisor_pilot  9187 6020
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,699 [wrapper] Test setup, not cleaning
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,707 [wrapper] apfmon messages muted
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,710 [wrapper] ==== wrapper stdout END ====
2025-02-24 09:23:01 (15088): Guest Log: 2025-02-24 01:22:10,714 [wrapper] ==== wrapper stderr END ====
2025-02-24 09:23:01 (15088): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 09:23:01 (15088): Guest Log:     "exeErrorCode": 0,
2025-02-24 09:23:01 (15088): Guest Log:     "exeErrorDiag": "",
2025-02-24 09:23:01 (15088): Guest Log:     "pilotErrorCode": 0,
2025-02-24 09:23:01 (15088): Guest Log:     "pilotErrorDiag": "",
2025-02-24 09:23:01 (15088): Guest Log:  *** Listing of results directory ***
2025-02-24 09:23:01 (15088): Guest Log: total 324824
2025-02-24 09:23:01 (15088): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 22 15:20 pilot3.tar.gz
2025-02-24 09:23:01 (15088): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 22 15:25 queuedata.json
2025-02-24 09:23:01 (15088): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 22 15:26 runpilot2-wrapper.sh
2025-02-24 09:23:01 (15088): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 23 22:23 start_atlas.sh
2025-02-24 09:23:01 (15088): Guest Log: -rwxr-xr-x. 1 atlas atlas    503560 Feb 23 22:23 input.tar.gz
2025-02-24 09:23:01 (15088): Guest Log: -rwxr-xr-x. 1 atlas atlas      9291 Feb 23 22:23 init_data.xml
2025-02-24 09:23:01 (15088): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 23 22:23 EVNT.43092757._001012.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 09:23:01 (15088): Guest Log: -rw-r--r--. 1 atlas atlas      2556 Feb 23 22:23 pandaJob.out
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas       424 Feb 23 22:24 setup.sh.local
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas    987744 Feb 23 22:27 agis_schedconf.cvmfs.json
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 23 22:27 agis_ddmendpoints.agis.ALL.json
2025-02-24 09:23:01 (15088): Guest Log: drwx------. 4 atlas atlas      4096 Feb 23 22:28 pilot3
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas 326587862 Feb 24 01:21 HITS.43205075._059042.pool.root.1
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas        97 Feb 24 01:21 pilot_heartbeat.json
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas      1008 Feb 24 01:21 memory_monitor_summary.json
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas    322862 Feb 24 01:21 log.43205075._059042.job.log.tgz.1
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas      7636 Feb 24 01:21 heartbeat.json
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas      4347 Feb 24 01:22 pilotlog.txt
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas    823685 Feb 24 01:22 log.43205075._059042.job.log.1
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 01:22 output.list
2025-02-24 09:23:01 (15088): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 01:22 runtime_log
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas   1167360 Feb 24 01:22 result.tar.gz
2025-02-24 09:23:01 (15088): Guest Log: -rw-r--r--. 1 atlas atlas     10938 Feb 24 01:22 runtime_log.err
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas       660 Feb 24 01:22 7OGLDmAa656n9Rq4apOajLDm4fhM0noT9bVoFjIUDmxJeKDmBWOHEm.diag
2025-02-24 09:23:01 (15088): Guest Log: Looking for outputfile HITS.43205075._059042.pool.root.1
2025-02-24 09:23:01 (15088): Guest Log: HITS file was successfully produced
2025-02-24 09:23:01 (15088): Guest Log: -rw-------. 1 atlas atlas 326587862 Feb 24 01:21 /home/atlas/RunAtlas/HITS.43205075._059042.pool.root.1
2025-02-24 09:23:03 (15088): Guest Log: Successfully finished the ATLAS job!
2025-02-24 09:23:03 (15088): Guest Log: Copying the results back to the shared directory!
2025-02-24 09:23:03 (15088): Guest Log:  *** Contents of shared directory: ***
2025-02-24 09:23:03 (15088): Guest Log: total 653920
2025-02-24 09:23:03 (15088): Guest Log: -rwxrwxrwx. 1 root root 341318838 Feb 23 22:22 ATLAS.root_0
2025-02-24 09:23:03 (15088): Guest Log: -rwxrwxrwx. 1 root root 326587862 Feb 24  2025 HITS.pool.root.1
2025-02-24 09:23:03 (15088): Guest Log: -rwxrwxrwx. 1 root root      9291 Feb 23 22:22 init_data.xml
2025-02-24 09:23:03 (15088): Guest Log: -rwxrwxrwx. 1 root root    503560 Feb 23 02:05 input.tar.gz
2025-02-24 09:23:03 (15088): Guest Log: -rwxrwxrwx. 1 root root   1167360 Feb 24  2025 result.tar.gz
2025-02-24 09:23:03 (15088): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 23 02:05 start_atlas.sh
2025-02-24 09:23:03 (15088): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 09:23:03 (15088): VM Completion File Detected.
2025-02-24 09:23:03 (15088): Powering off VM.
2025-02-24 09:23:04 (15088): Successfully stopped VM.
2025-02-24 09:23:04 (15088): Deregistering VM. (boinc_64020509827550d0, slot#3)
2025-02-24 09:23:04 (15088): Removing network bandwidth throttle group from VM.
2025-02-24 09:23:04 (15088): Removing VM from VirtualBox.
09:23:09 (15088): called boinc_finish(0)

</stderr_txt>
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