Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:58:48 (2858277): wrapper (7.7.26015): starting
12:58:48 (2858277): wrapper: running run_atlas (--nthreads 4)
[2025-02-26 12:58:48] Arguments: --nthreads 4
[2025-02-26 12:58:48] Threads: 4
[2025-02-26 12:58:48] Checking for CVMFS
[2025-02-26 12:58:48] No cvmfs_config command found, will try listing directly
[2025-02-26 12:58:48] CVMFS is ok
[2025-02-26 12:58:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 12:58:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 12:58:48] Further information can be found at the LHC@home message board.
[2025-02-26 12:58:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 12:58:48] Checking for apptainer binary...
[2025-02-26 12:58:48] which: no apptainer in ((null))
[2025-02-26 12:58:48] apptainer is not installed, using version from CVMFS
[2025-02-26 12:58:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 12:58:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-02-26 12:58:48] apptainer works
[2025-02-26 12:58:48] Set ATHENA_PROC_NUMBER=4
[2025-02-26 12:58:48] Set ATHENA_CORE_NUMBER=4
[2025-02-26 12:58:48] Starting ATLAS job with PandaID=6522670541
[2025-02-26 12:58:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 19:08:35]  *** The last 200 lines of the pilot log: ***
[2025-02-26 19:08:35] 2025-02-26 18:08:15,634 | INFO     | mean y: 2324460.544198895
[2025-02-26 19:08:35] 2025-02-26 18:08:15,634 | INFO     | -- intersect: -19361638844.750576
[2025-02-26 19:08:35] 2025-02-26 18:08:15,634 | INFO     | intersect: -19361638844.750576
[2025-02-26 19:08:35] 2025-02-26 18:08:15,634 | INFO     | chi2: 4.530215296660746
[2025-02-26 19:08:35] 2025-02-26 18:08:15,635 | INFO     | model: linear, x: [1740571226.0, 1740571287.0, 1740571348.0, 1740571409.0, 1740571470.0, 1740571531.0, 1740571592.0, 1740571653.0, 1740571714.0, 1740571775.0, 1740
[2025-02-26 19:08:35] 2025-02-26 18:08:15,638 | INFO     | sum of square deviations: 14108461738.0
[2025-02-26 19:08:35] 2025-02-26 18:08:15,641 | INFO     | sum of deviations: 184373396090.0
[2025-02-26 19:08:35] 2025-02-26 18:08:15,641 | INFO     | mean x: 1740582084.0
[2025-02-26 19:08:35] 2025-02-26 18:08:15,641 | INFO     | mean y: 2329652.280112045
[2025-02-26 19:08:35] 2025-02-26 18:08:15,641 | INFO     | -- intersect: -22744092740.185654
[2025-02-26 19:08:35] 2025-02-26 18:08:15,642 | INFO     | intersect: -22744092740.185654
[2025-02-26 19:08:35] 2025-02-26 18:08:15,642 | INFO     | chi2: 3.717200558810108
[2025-02-26 19:08:35] 2025-02-26 18:08:15,642 | INFO     | current chi2=3.717200558810108 (change=17.946492266050065 %)
[2025-02-26 19:08:35] 2025-02-26 18:08:15,642 | INFO     | right removable region: 356
[2025-02-26 19:08:35] 2025-02-26 18:08:15,643 | INFO     | model: linear, x: [1740571531.0, 1740571592.0, 1740571653.0, 1740571714.0, 1740571775.0, 1740571836.0, 1740571897.0, 1740571958.0, 1740572019.0, 1740572080.0, 1740
[2025-02-26 19:08:35] 2025-02-26 18:08:15,643 | INFO     | sum of square deviations: 14108461738.0
[2025-02-26 19:08:35] 2025-02-26 18:08:15,647 | INFO     | sum of deviations: 80077995159.0
[2025-02-26 19:08:35] 2025-02-26 18:08:15,647 | INFO     | mean x: 1740582389.0
[2025-02-26 19:08:35] 2025-02-26 18:08:15,647 | INFO     | mean y: 2345621.557422969
[2025-02-26 19:08:35] 2025-02-26 18:08:15,647 | INFO     | -- intersect: -9876998470.560543
[2025-02-26 19:08:35] 2025-02-26 18:08:15,647 | INFO     | intersect: -9876998470.560543
[2025-02-26 19:08:35] 2025-02-26 18:08:15,647 | INFO     | chi2: 2.19587502151104
[2025-02-26 19:08:35] 2025-02-26 18:08:15,647 | INFO     | current chi2=2.19587502151104 (change=51.528241425310725 %)
[2025-02-26 19:08:35] 2025-02-26 18:08:15,648 | INFO     | model: linear, x: [1740571836.0, 1740571897.0, 1740571958.0, 1740572019.0, 1740572080.0, 1740572141.0, 1740572202.0, 1740572263.0, 1740572324.0, 1740572385.0, 1740
[2025-02-26 19:08:35] 2025-02-26 18:08:15,648 | INFO     | sum of square deviations: 13523929848.0
[2025-02-26 19:08:35] 2025-02-26 18:08:15,651 | INFO     | sum of deviations: 15240250003.999992
[2025-02-26 19:08:35] 2025-02-26 18:08:15,652 | INFO     | mean x: 1740582541.5
[2025-02-26 19:08:35] 2025-02-26 18:08:15,652 | INFO     | mean y: 2362538.340909091
[2025-02-26 19:08:35] 2025-02-26 18:08:15,652 | INFO     | -- intersect: -1959117104.2779596
[2025-02-26 19:08:35] 2025-02-26 18:08:15,652 | INFO     | intersect: -1959117104.2779596
[2025-02-26 19:08:35] 2025-02-26 18:08:15,652 | INFO     | chi2: 0.9232332044961308
[2025-02-26 19:08:35] 2025-02-26 18:08:15,652 | INFO     | current chi2=0.9232332044961308 (change=57.95602229398149 %)
[2025-02-26 19:08:35] 2025-02-26 18:08:15,653 | INFO     | model: linear, x: [1740572141.0, 1740572202.0, 1740572263.0, 1740572324.0, 1740572385.0, 1740572446.0, 1740572507.0, 1740572568.0, 1740572629.0, 1740572690.0, 1740
[2025-02-26 19:08:35] 2025-02-26 18:08:15,654 | INFO     | sum of square deviations: 12955770358.0
[2025-02-26 19:08:35] 2025-02-26 18:08:15,658 | INFO     | sum of deviations: 758548908.0
[2025-02-26 19:08:35] 2025-02-26 18:08:15,658 | INFO     | mean x: 1740582694.0
[2025-02-26 19:08:35] 2025-02-26 18:08:15,658 | INFO     | mean y: 2366411.121037464
[2025-02-26 19:08:35] 2025-02-26 18:08:15,658 | INFO     | -- intersect: -99543167.80277555
[2025-02-26 19:08:35] 2025-02-26 18:08:15,658 | INFO     | intersect: -99543167.80277555
[2025-02-26 19:08:35] 2025-02-26 18:08:15,659 | INFO     | chi2: 0.8405315926176179
[2025-02-26 19:08:35] 2025-02-26 18:08:15,659 | INFO     | current chi2=0.8405315926176179 (change=8.957824683488132 %)
[2025-02-26 19:08:35] 2025-02-26 18:08:15,659 | INFO     | left removable region: 30
[2025-02-26 19:08:35] 2025-02-26 18:08:15,659 | INFO     | model: linear, x: [1740573056.0, 1740573117.0, 1740573178.0, 1740573239.0, 1740573300.0, 1740573361.0, 1740573422.0, 1740573483.0, 1740573544.0, 1740573605.0, 1740
[2025-02-26 19:08:35] 2025-02-26 18:08:15,659 | INFO     | sum of square deviations: 10743038637.5
[2025-02-26 19:08:35] 2025-02-26 18:08:15,662 | INFO     | sum of deviations: 16667495185.999998
[2025-02-26 19:08:35] 2025-02-26 18:08:15,662 | INFO     | mean x: 1740582968.5
[2025-02-26 19:08:35] 2025-02-26 18:08:15,663 | INFO     | mean y: 2374187.226993865
[2025-02-26 19:08:35] 2025-02-26 18:08:15,663 | INFO     | -- intersect: -2698086941.809631
[2025-02-26 19:08:35] 2025-02-26 18:08:15,663 | INFO     | intersect: -2698086941.809631
[2025-02-26 19:08:35] 2025-02-26 18:08:15,663 | INFO     | chi2: 0.0004852298000419295
[2025-02-26 19:08:35] 2025-02-26 18:08:15,663 | INFO     | -- intersect: -2698086941.809631
[2025-02-26 19:08:35] 2025-02-26 18:08:15,663 | INFO     | current memory leak: 1.55 B/s (using 326 data points, chi2=0.00)
[2025-02-26 19:08:35] 2025-02-26 18:08:15,664 | INFO     | ..............................
[2025-02-26 19:08:35] 2025-02-26 18:08:15,664 | INFO     | . Timing measurements:
[2025-02-26 19:08:35] 2025-02-26 18:08:15,665 | INFO     | . get job = 25 s
[2025-02-26 19:08:35] 2025-02-26 18:08:15,665 | INFO     | . initial setup = 26 s
[2025-02-26 19:08:35] 2025-02-26 18:08:15,665 | INFO     | . payload setup = 8 s
[2025-02-26 19:08:35] 2025-02-26 18:08:15,665 | INFO     | . stage-in = 0 s
[2025-02-26 19:08:35] 2025-02-26 18:08:15,665 | INFO     | . payload execution = 22062 s
[2025-02-26 19:08:35] 2025-02-26 18:08:15,665 | INFO     | . stage-out = 1 s
[2025-02-26 19:08:35] 2025-02-26 18:08:15,665 | INFO     | . log creation = 0 s
[2025-02-26 19:08:35] 2025-02-26 18:08:15,665 | INFO     | ..............................
[2025-02-26 19:08:35] 2025-02-26 18:08:15,934 | WARNING  | process 2872950 can no longer be monitored (due to stat problems) - aborting
[2025-02-26 19:08:35] 2025-02-26 18:08:15,935 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6522670541/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 19:08:35] 2025-02-26 18:08:16,059 | INFO     | 
[2025-02-26 19:08:35] 2025-02-26 18:08:16,059 | INFO     | job summary report
[2025-02-26 19:08:35] 2025-02-26 18:08:16,059 | INFO     | --------------------------------------------------
[2025-02-26 19:08:35] 2025-02-26 18:08:16,060 | INFO     | PanDA job id: 6522670541
[2025-02-26 19:08:35] 2025-02-26 18:08:16,060 | INFO     | task id: 43205094
[2025-02-26 19:08:35] 2025-02-26 18:08:16,060 | INFO     | errors: (none)
[2025-02-26 19:08:35] 2025-02-26 18:08:16,060 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 19:08:35] 2025-02-26 18:08:16,060 | INFO     | pilot state: finished 
[2025-02-26 19:08:35] 2025-02-26 18:08:16,060 | INFO     | transexitcode: 0
[2025-02-26 19:08:35] 2025-02-26 18:08:16,060 | INFO     | exeerrorcode: 0
[2025-02-26 19:08:35] 2025-02-26 18:08:16,060 | INFO     | exeerrordiag: 
[2025-02-26 19:08:35] 2025-02-26 18:08:16,061 | INFO     | exitcode: 0
[2025-02-26 19:08:35] 2025-02-26 18:08:16,061 | INFO     | exitmsg: OK
[2025-02-26 19:08:35] 2025-02-26 18:08:16,061 | INFO     | cpuconsumptiontime: 85566 s
[2025-02-26 19:08:35] 2025-02-26 18:08:16,061 | INFO     | nevents: 400
[2025-02-26 19:08:35] 2025-02-26 18:08:16,061 | INFO     | neventsw: 0
[2025-02-26 19:08:35] 2025-02-26 18:08:16,061 | INFO     | pid: 2872950
[2025-02-26 19:08:35] 2025-02-26 18:08:16,061 | INFO     | pgrp: 2872950
[2025-02-26 19:08:35] 2025-02-26 18:08:16,061 | INFO     | corecount: 4
[2025-02-26 19:08:35] 2025-02-26 18:08:16,061 | INFO     | event service: False
[2025-02-26 19:08:35] 2025-02-26 18:08:16,061 | INFO     | sizes: {0: 2363779, 7: 2363985, 11: 2364013, 22074: 2397498, 22075: 2397497, 22076: 2406516, 22077: 2406700, 22085: 2406870}
[2025-02-26 19:08:35] 2025-02-26 18:08:16,061 | INFO     | --------------------------------------------------
[2025-02-26 19:08:35] 2025-02-26 18:08:16,062 | INFO     | 
[2025-02-26 19:08:35] 2025-02-26 18:08:16,062 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-02-26 19:08:35] 2025-02-26 18:08:16,094 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,094 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,094 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,094 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,094 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,094 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,095 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,095 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,096 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 19:08:35] 2025-02-26 18:08:16,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,096 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 19:08:35] 2025-02-26 18:08:16,096 | INFO     | job 6522670541 has completed (purged errors)
[2025-02-26 19:08:35] 2025-02-26 18:08:16,096 | INFO     | overall cleanup function is called
[2025-02-26 19:08:35] 2025-02-26 18:08:16,266 | INFO     | number of running child processes to parent process 2872950: 1
[2025-02-26 19:08:35] 2025-02-26 18:08:16,266 | INFO     | maximum number of monitored processes: 6
[2025-02-26 19:08:35] 2025-02-26 18:08:16,266 | INFO     | aborting job monitoring since job object (job id=6522670541) has expired
[2025-02-26 19:08:35] 2025-02-26 18:08:17,101 | INFO     | --- collectZombieJob: --- 10, [2872950]
[2025-02-26 19:08:35] 2025-02-26 18:08:17,101 | INFO     | zombie collector waiting for pid 2872950
[2025-02-26 19:08:35] 2025-02-26 18:08:17,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 19:08:35] 2025-02-26 18:08:17,101 | INFO     | collected zombie processes
[2025-02-26 19:08:35] 2025-02-26 18:08:17,102 | INFO     | will attempt to kill all subprocesses of pid=2872950
[2025-02-26 19:08:35] 2025-02-26 18:08:17,426 | INFO     | process IDs to be killed: [2872950] (in reverse order)
[2025-02-26 19:08:35] 2025-02-26 18:08:17,722 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 19:08:35] 2025-02-26 18:08:17,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 19:08:35] 2025-02-26 18:08:17,746 | INFO     | did not find any defunct processes belonging to 2872950
[2025-02-26 19:08:35] 2025-02-26 18:08:17,765 | INFO     | did not find any defunct processes belonging to 2872950
[2025-02-26 19:08:35] 2025-02-26 18:08:17,765 | INFO     | ready for new job
[2025-02-26 19:08:35] 2025-02-26 18:08:17,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 19:08:35] 2025-02-26 18:08:17,769 | INFO     | **************************************
[2025-02-26 19:08:35] 2025-02-26 18:08:17,769 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 19:08:35] 2025-02-26 18:08:17,769 | INFO     | **************************************
[2025-02-26 19:08:35] 2025-02-26 18:08:17,769 | INFO     | 
[2025-02-26 19:08:35] 2025-02-26 18:08:17,778 | INFO     | architecture information:
[2025-02-26 19:08:35] 2025-02-26 18:08:17,778 | INFO     | executing command: cat /etc/os-release
[2025-02-26 19:08:35] 2025-02-26 18:08:17,801 | INFO     | cat /etc/os-release:
[2025-02-26 19:08:35] NAME="CentOS Linux"
[2025-02-26 19:08:35] VERSION="7 (Core)"
[2025-02-26 19:08:35] ID="centos"
[2025-02-26 19:08:35] ID_LIKE="rhel fedora"
[2025-02-26 19:08:35] VERSION_ID="7"
[2025-02-26 19:08:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 19:08:35] ANSI_COLOR="0;31"
[2025-02-26 19:08:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 19:08:35] HOME_URL="https://www.centos.org/"
[2025-02-26 19:08:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 19:08:35] 
[2025-02-26 19:08:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 19:08:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 19:08:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 19:08:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 19:08:35] 
[2025-02-26 19:08:35] 2025-02-26 18:08:17,801 | INFO     | **************************************
[2025-02-26 19:08:35] 2025-02-26 18:08:18,304 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-02-26 19:08:35] 2025-02-26 18:08:18,328 | INFO     | sufficient remaining disk space (3327999868928 B)
[2025-02-26 19:08:35] 2025-02-26 18:08:18,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 19:08:35] 2025-02-26 18:08:18,328 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 19:08:35] 2025-02-26 18:08:18,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 19:08:35] 2025-02-26 18:08:18,770 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-26 19:08:35] 2025-02-26 18:08:18,770 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-26 19:08:35] 2025-02-26 18:08:18,770 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 19:08:35] 2025-02-26 18:08:18,770 | INFO     | will abort loop
[2025-02-26 19:08:35] 2025-02-26 18:08:18,856 | INFO     | all job control threads have been joined
[2025-02-26 19:08:35] 2025-02-26 18:08:18,939 | INFO     | all data control threads have been joined
[2025-02-26 19:08:35] 2025-02-26 18:08:19,091 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 19:08:35] 2025-02-26 18:08:19,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 19:08:35] 2025-02-26 18:08:19,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 19:08:35] 2025-02-26 18:08:19,334 | INFO     | [job] retrieve thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:19,366 | INFO     | all payload control threads have been joined
[2025-02-26 19:08:35] 2025-02-26 18:08:19,463 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:19,511 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:19,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 19:08:35] 2025-02-26 18:08:19,775 | INFO     | [job] job monitor thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:19,861 | INFO     | [job] control thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:19,943 | INFO     | [data] control thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:19,952 | INFO     | [payload] failed_post thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:19,989 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:19,990 | INFO     | [data] copytool_in thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:20,371 | INFO     | [payload] control thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:20,517 | INFO     | [payload] validate_post thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:20,630 | INFO     | [job] validate thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:20,774 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 19:08:35] 2025-02-26 18:08:21,565 | INFO     | [data] copytool_out thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:21,780 | INFO     | [job] queue monitor thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:22,335 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:28,741 | INFO     | job.realtimelogging is not enabled
[2025-02-26 19:08:35] 2025-02-26 18:08:29,746 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 19:08:35] 2025-02-26 18:08:30,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23418379372352)>', '<ExcThread(monitor, started 23418145572608)>']
[2025-02-26 19:08:35] 2025-02-26 18:08:30,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 19:08:35] 2025-02-26 18:08:30,147 | INFO     | [monitor] control thread has ended
[2025-02-26 19:08:35] 2025-02-26 18:08:35,036 | INFO     | all workflow threads have been joined
[2025-02-26 19:08:35] 2025-02-26 18:08:35,036 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 19:08:35] 2025-02-26 18:08:35,036 | INFO     | traces error code: 0
[2025-02-26 19:08:35] 2025-02-26 18:08:35,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 19:08:35] 2025-02-26 18:08:35,219 [wrapper] ==== pilot stdout END ====
[2025-02-26 19:08:35] 2025-02-26 18:08:35,222 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 19:08:35] 2025-02-26 18:08:35,225 [wrapper] pilotpid: 2862263
[2025-02-26 19:08:35] 2025-02-26 18:08:35,228 [wrapper] Pilot exit status: 0
[2025-02-26 19:08:35] 2025-02-26 18:08:35,242 [wrapper] pandaids: 6522670541
[2025-02-26 19:08:35] 2025-02-26 18:08:35,389 [wrapper] cleanup supervisor_pilot  347941 2862264
[2025-02-26 19:08:35] 2025-02-26 18:08:35,392 [wrapper] Test setup, not cleaning
[2025-02-26 19:08:35] 2025-02-26 18:08:35,399 [wrapper] apfmon messages muted
[2025-02-26 19:08:35] 2025-02-26 18:08:35,402 [wrapper] ==== wrapper stdout END ====
[2025-02-26 19:08:35] 2025-02-26 18:08:35,406 [wrapper] ==== wrapper stderr END ====
[2025-02-26 19:08:35]  *** Error codes and diagnostics ***
[2025-02-26 19:08:35]     "exeErrorCode": 0,
[2025-02-26 19:08:35]     "exeErrorDiag": "",
[2025-02-26 19:08:35]     "pilotErrorCode": 0,
[2025-02-26 19:08:35]     "pilotErrorDiag": "",
[2025-02-26 19:08:35]  *** Listing of results directory ***
[2025-02-26 19:08:35] total 664020
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc    491065 Feb 22 04:24 pilot3.tar.gz
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc      5118 Feb 22 04:28 queuedata.json
[2025-02-26 19:08:35] -rwx------ 1 boinc boinc     35865 Feb 22 04:29 runpilot2-wrapper.sh
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc       100 Feb 26 12:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 19:08:35] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 12:58 run_atlas
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc       105 Feb 26 12:58 job.xml
[2025-02-26 19:08:35] -rw-r--r-- 2 boinc boinc 342257270 Feb 26 12:58 EVNT.43092757._002084.pool.root.1
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc      6677 Feb 26 12:58 init_data.xml
[2025-02-26 19:08:35] -rw-r--r-- 2 boinc boinc     17569 Feb 26 12:58 start_atlas.sh
[2025-02-26 19:08:35] drwxrwx--x 2 boinc boinc      4096 Feb 26 12:58 shared
[2025-02-26 19:08:35] -rw-r--r-- 2 boinc boinc    503558 Feb 26 12:58 input.tar.gz
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc         0 Feb 26 12:58 boinc_lockfile
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc      2547 Feb 26 12:58 pandaJob.out
[2025-02-26 19:08:35] -rw------- 1 boinc boinc       424 Feb 26 12:58 setup.sh.local
[2025-02-26 19:08:35] -rw------- 1 boinc boinc      4732 Feb 26 12:59 agis_schedconf.agis.BOINC_MCORE.json
[2025-02-26 19:08:35] drwx------ 4 boinc boinc      4096 Feb 26 12:59 pilot3
[2025-02-26 19:08:35] -rw------- 1 boinc boinc 328826054 Feb 26 19:07 HITS.43205094._035159.pool.root.1
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc       531 Feb 26 19:07 boinc_task_state.xml
[2025-02-26 19:08:35] -rw------- 1 boinc boinc        95 Feb 26 19:07 pilot_heartbeat.json
[2025-02-26 19:08:35] -rw------- 1 boinc boinc      1023 Feb 26 19:08 memory_monitor_summary.json
[2025-02-26 19:08:35] -rw------- 1 boinc boinc   1569202 Feb 26 19:08 agis_ddmendpoints.agis.ALL.json
[2025-02-26 19:08:35] -rw------- 1 boinc boinc    441468 Feb 26 19:08 log.43205094._035159.job.log.tgz.1
[2025-02-26 19:08:35] -rw------- 1 boinc boinc      7694 Feb 26 19:08 heartbeat.json
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc      8192 Feb 26 19:08 boinc_mmap_file
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc        28 Feb 26 19:08 wrapper_checkpoint.txt
[2025-02-26 19:08:35] -rw------- 1 boinc boinc      4484 Feb 26 19:08 pilotlog.txt
[2025-02-26 19:08:35] -rw------- 1 boinc boinc   2589804 Feb 26 19:08 log.43205094._035159.job.log.1
[2025-02-26 19:08:35] -rw------- 1 boinc boinc       357 Feb 26 19:08 output.list
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc       620 Feb 26 19:08 runtime_log
[2025-02-26 19:08:35] -rw------- 1 boinc boinc   3051520 Feb 26 19:08 result.tar.gz
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc     11424 Feb 26 19:08 runtime_log.err
[2025-02-26 19:08:35] -rw------- 1 boinc boinc       666 Feb 26 19:08 QwLKDmnNv56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5OtKDmiIN8gm.diag
[2025-02-26 19:08:35] -rw-r--r-- 1 boinc boinc     21398 Feb 26 19:08 stderr.txt
[2025-02-26 19:08:35] HITS file was successfully produced:
[2025-02-26 19:08:35] -rw------- 1 boinc boinc 328826054 Feb 26 19:07 shared/HITS.pool.root.1
[2025-02-26 19:08:35]  *** Contents of shared directory: ***
[2025-02-26 19:08:35] total 658856
[2025-02-26 19:08:35] -rw-r--r-- 2 boinc boinc 342257270 Feb 26 12:58 ATLAS.root_0
[2025-02-26 19:08:35] -rw-r--r-- 2 boinc boinc     17569 Feb 26 12:58 start_atlas.sh
[2025-02-26 19:08:35] -rw-r--r-- 2 boinc boinc    503558 Feb 26 12:58 input.tar.gz
[2025-02-26 19:08:35] -rw------- 1 boinc boinc 328826054 Feb 26 19:07 HITS.pool.root.1
[2025-02-26 19:08:35] -rw------- 1 boinc boinc   3051520 Feb 26 19:08 result.tar.gz
19:08:36 (2858277): run_atlas exited; CPU time 85215.895616
19:08:36 (2858277): called boinc_finish(0)

</stderr_txt>
]]>

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