Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:35:12 (1931853): wrapper (7.7.26015): starting
03:35:12 (1931853): wrapper: running run_atlas (--nthreads 4)
[2025-02-27 03:35:12] Arguments: --nthreads 4
[2025-02-27 03:35:12] Threads: 4
[2025-02-27 03:35:12] Checking for CVMFS
[2025-02-27 03:35:12] No cvmfs_config command found, will try listing directly
[2025-02-27 03:35:12] CVMFS is ok
[2025-02-27 03:35:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-27 03:35:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-27 03:35:12] Further information can be found at the LHC@home message board.
[2025-02-27 03:35:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-27 03:35:12] Checking for apptainer binary...
[2025-02-27 03:35:12] which: no apptainer in ((null))
[2025-02-27 03:35:12] apptainer is not installed, using version from CVMFS
[2025-02-27 03:35:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-27 03:35:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-02-27 03:35:13] apptainer works
[2025-02-27 03:35:13] Set ATHENA_PROC_NUMBER=4
[2025-02-27 03:35:13] Set ATHENA_CORE_NUMBER=4
[2025-02-27 03:35:13] Starting ATLAS job with PandaID=6523023318
[2025-02-27 03:35:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-27 08:55:23]  *** The last 200 lines of the pilot log: ***
[2025-02-27 08:55:23] 2025-02-27 07:55:08,721 | INFO     | sum of deviations: 133584108010.00002
[2025-02-27 08:55:23] 2025-02-27 07:55:08,721 | INFO     | mean x: 1740633152.0
[2025-02-27 08:55:23] 2025-02-27 07:55:08,721 | INFO     | mean y: 2327245.051779935
[2025-02-27 08:55:23] 2025-02-27 07:55:08,721 | INFO     | -- intersect: -25413996393.527214
[2025-02-27 08:55:23] 2025-02-27 07:55:08,721 | INFO     | intersect: -25413996393.527214
[2025-02-27 08:55:23] 2025-02-27 07:55:08,722 | INFO     | chi2: 3.666023677445208
[2025-02-27 08:55:23] 2025-02-27 07:55:08,722 | INFO     | current chi2=3.666023677445208 (change=-0.016163386892168403 %)
[2025-02-27 08:55:23] 2025-02-27 07:55:08,722 | INFO     | right removable region: 308
[2025-02-27 08:55:23] 2025-02-27 07:55:08,722 | INFO     | model: linear, x: [1740624063.0, 1740624124.0, 1740624185.0, 1740624246.0, 1740624307.0, 1740624368.0, 1740624429.0, 1740624490.0, 1740624551.0, 1740624612.0, 1740
[2025-02-27 08:55:23] 2025-02-27 07:55:08,722 | INFO     | sum of square deviations: 9148487810.0
[2025-02-27 08:55:23] 2025-02-27 07:55:08,725 | INFO     | sum of deviations: 64778694409.999985
[2025-02-27 08:55:23] 2025-02-27 07:55:08,725 | INFO     | mean x: 1740633457.0
[2025-02-27 08:55:23] 2025-02-27 07:55:08,725 | INFO     | mean y: 2352142.4077669904
[2025-02-27 08:55:23] 2025-02-27 07:55:08,725 | INFO     | -- intersect: -12322740827.336798
[2025-02-27 08:55:23] 2025-02-27 07:55:08,725 | INFO     | intersect: -12322740827.336798
[2025-02-27 08:55:23] 2025-02-27 07:55:08,726 | INFO     | chi2: 1.3537081762272958
[2025-02-27 08:55:23] 2025-02-27 07:55:08,726 | INFO     | current chi2=1.3537081762272958 (change=63.06824231258813 %)
[2025-02-27 08:55:23] 2025-02-27 07:55:08,726 | INFO     | model: linear, x: [1740624368.0, 1740624429.0, 1740624490.0, 1740624551.0, 1740624612.0, 1740624673.0, 1740624734.0, 1740624795.0, 1740624856.0, 1740624917.0, 1740
[2025-02-27 08:55:23] 2025-02-27 07:55:08,727 | INFO     | sum of square deviations: 8711530780.0
[2025-02-27 08:55:23] 2025-02-27 07:55:08,729 | INFO     | sum of deviations: 9363783802.5
[2025-02-27 08:55:23] 2025-02-27 07:55:08,729 | INFO     | mean x: 1740633609.5
[2025-02-27 08:55:23] 2025-02-27 07:55:08,729 | INFO     | mean y: 2371486.5888157897
[2025-02-27 08:55:23] 2025-02-27 07:55:08,729 | INFO     | -- intersect: -1868587499.8779933
[2025-02-27 08:55:23] 2025-02-27 07:55:08,730 | INFO     | intersect: -1868587499.8779933
[2025-02-27 08:55:23] 2025-02-27 07:55:08,730 | INFO     | chi2: 0.09115566942125426
[2025-02-27 08:55:23] 2025-02-27 07:55:08,730 | INFO     | current chi2=0.09115566942125426 (change=93.26622450672495 %)
[2025-02-27 08:55:23] 2025-02-27 07:55:08,730 | INFO     | model: linear, x: [1740624673.0, 1740624734.0, 1740624795.0, 1740624856.0, 1740624917.0, 1740624978.0, 1740625039.0, 1740625100.0, 1740625161.0, 1740625222.0, 1740
[2025-02-27 08:55:23] 2025-02-27 07:55:08,732 | INFO     | sum of square deviations: 8288713550.0
[2025-02-27 08:55:23] 2025-02-27 07:55:08,734 | INFO     | sum of deviations: -1784504491.999998
[2025-02-27 08:55:23] 2025-02-27 07:55:08,734 | INFO     | mean x: 1740633762.0
[2025-02-27 08:55:23] 2025-02-27 07:55:08,734 | INFO     | mean y: 2375485.5551839466
[2025-02-27 08:55:23] 2025-02-27 07:55:08,734 | INFO     | -- intersect: 377122272.07139254
[2025-02-27 08:55:23] 2025-02-27 07:55:08,734 | INFO     | intersect: 377122272.07139254
[2025-02-27 08:55:23] 2025-02-27 07:55:08,735 | INFO     | chi2: 0.015120799784541596
[2025-02-27 08:55:23] 2025-02-27 07:55:08,735 | INFO     | current chi2=0.015120799784541596 (change=83.41211261949664 %)
[2025-02-27 08:55:23] 2025-02-27 07:55:08,735 | INFO     | model: linear, x: [1740624978.0, 1740625039.0, 1740625100.0, 1740625161.0, 1740625222.0, 1740625283.0, 1740625344.0, 1740625405.0, 1740625466.0, 1740625527.0, 1740
[2025-02-27 08:55:23] 2025-02-27 07:55:08,735 | INFO     | sum of square deviations: 7879803557.5
[2025-02-27 08:55:23] 2025-02-27 07:55:08,738 | INFO     | sum of deviations: -903016488.9999977
[2025-02-27 08:55:23] 2025-02-27 07:55:08,738 | INFO     | mean x: 1740633914.5
[2025-02-27 08:55:23] 2025-02-27 07:55:08,738 | INFO     | mean y: 2375154.8911564625
[2025-02-27 08:55:23] 2025-02-27 07:55:08,738 | INFO     | -- intersect: 201849813.69912285
[2025-02-27 08:55:23] 2025-02-27 07:55:08,738 | INFO     | intersect: 201849813.69912285
[2025-02-27 08:55:23] 2025-02-27 07:55:08,738 | INFO     | chi2: 0.014708740085615212
[2025-02-27 08:55:23] 2025-02-27 07:55:08,739 | INFO     | current chi2=0.014708740085615212 (change=2.7251184117102256 %)
[2025-02-27 08:55:23] 2025-02-27 07:55:08,739 | INFO     | left removable region: 40
[2025-02-27 08:55:23] 2025-02-27 07:55:08,739 | INFO     | model: linear, x: [1740626198.0, 1740626259.0, 1740626320.0, 1740626381.0, 1740626442.0, 1740626503.0, 1740626564.0, 1740626625.0, 1740626686.0, 1740626747.0, 1740
[2025-02-27 08:55:23] 2025-02-27 07:55:08,739 | INFO     | sum of square deviations: 5968658887.0
[2025-02-27 08:55:23] 2025-02-27 07:55:08,741 | INFO     | sum of deviations: 8165761827.999999
[2025-02-27 08:55:23] 2025-02-27 07:55:08,741 | INFO     | mean x: 1740634341.5
[2025-02-27 08:55:23] 2025-02-27 07:55:08,742 | INFO     | mean y: 2371021.6417910447
[2025-02-27 08:55:23] 2025-02-27 07:55:08,742 | INFO     | -- intersect: -2379002370.8441606
[2025-02-27 08:55:23] 2025-02-27 07:55:08,742 | INFO     | intersect: -2379002370.8441606
[2025-02-27 08:55:23] 2025-02-27 07:55:08,742 | INFO     | chi2: 0.0010426551178300666
[2025-02-27 08:55:23] 2025-02-27 07:55:08,742 | INFO     | -- intersect: -2379002370.8441606
[2025-02-27 08:55:23] 2025-02-27 07:55:08,742 | INFO     | current memory leak: 1.37 B/s (using 268 data points, chi2=0.00)
[2025-02-27 08:55:23] 2025-02-27 07:55:08,743 | INFO     | ..............................
[2025-02-27 08:55:23] 2025-02-27 07:55:08,743 | INFO     | . Timing measurements:
[2025-02-27 08:55:23] 2025-02-27 07:55:08,743 | INFO     | . get job = 0 s
[2025-02-27 08:55:23] 2025-02-27 07:55:08,743 | INFO     | . initial setup = 1 s
[2025-02-27 08:55:23] 2025-02-27 07:55:08,744 | INFO     | . payload setup = 8 s
[2025-02-27 08:55:23] 2025-02-27 07:55:08,744 | INFO     | . stage-in = 0 s
[2025-02-27 08:55:23] 2025-02-27 07:55:08,744 | INFO     | . payload execution = 19142 s
[2025-02-27 08:55:23] 2025-02-27 07:55:08,744 | INFO     | . stage-out = 1 s
[2025-02-27 08:55:23] 2025-02-27 07:55:08,744 | INFO     | . log creation = 0 s
[2025-02-27 08:55:23] 2025-02-27 07:55:08,744 | INFO     | ..............................
[2025-02-27 08:55:23] 2025-02-27 07:55:08,839 | INFO     | 
[2025-02-27 08:55:23] 2025-02-27 07:55:08,840 | INFO     | job summary report
[2025-02-27 08:55:23] 2025-02-27 07:55:08,840 | INFO     | --------------------------------------------------
[2025-02-27 08:55:23] 2025-02-27 07:55:08,840 | INFO     | PanDA job id: 6523023318
[2025-02-27 08:55:23] 2025-02-27 07:55:08,840 | INFO     | task id: 43078919
[2025-02-27 08:55:23] 2025-02-27 07:55:08,840 | INFO     | errors: (none)
[2025-02-27 08:55:23] 2025-02-27 07:55:08,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-27 08:55:23] 2025-02-27 07:55:08,840 | INFO     | pilot state: finished 
[2025-02-27 08:55:23] 2025-02-27 07:55:08,840 | INFO     | transexitcode: 0
[2025-02-27 08:55:23] 2025-02-27 07:55:08,840 | INFO     | exeerrorcode: 0
[2025-02-27 08:55:23] 2025-02-27 07:55:08,841 | INFO     | exeerrordiag: 
[2025-02-27 08:55:23] 2025-02-27 07:55:08,841 | INFO     | exitcode: 0
[2025-02-27 08:55:23] 2025-02-27 07:55:08,841 | INFO     | exitmsg: OK
[2025-02-27 08:55:23] 2025-02-27 07:55:08,841 | INFO     | cpuconsumptiontime: 72613 s
[2025-02-27 08:55:23] 2025-02-27 07:55:08,841 | INFO     | nevents: 400
[2025-02-27 08:55:23] 2025-02-27 07:55:08,841 | INFO     | neventsw: 0
[2025-02-27 08:55:23] 2025-02-27 07:55:08,841 | INFO     | pid: 1943323
[2025-02-27 08:55:23] 2025-02-27 07:55:08,841 | INFO     | pgrp: 1943323
[2025-02-27 08:55:23] 2025-02-27 07:55:08,841 | INFO     | corecount: 4
[2025-02-27 08:55:23] 2025-02-27 07:55:08,841 | INFO     | event service: False
[2025-02-27 08:55:23] 2025-02-27 07:55:08,841 | INFO     | sizes: {0: 2363832, 7: 2364038, 11: 2364066, 19154: 2396327, 19155: 2396326, 19156: 2405345, 19159: 2405529, 19165: 2405699}
[2025-02-27 08:55:23] 2025-02-27 07:55:08,842 | INFO     | --------------------------------------------------
[2025-02-27 08:55:23] 2025-02-27 07:55:08,842 | INFO     | 
[2025-02-27 08:55:23] 2025-02-27 07:55:08,842 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-02-27 08:55:23] 2025-02-27 07:55:08,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,874 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,874 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,874 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-27 08:55:23] 2025-02-27 07:55:08,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,875 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-27 08:55:23] 2025-02-27 07:55:08,875 | INFO     | job 6523023318 has completed (purged errors)
[2025-02-27 08:55:23] 2025-02-27 07:55:08,875 | INFO     | overall cleanup function is called
[2025-02-27 08:55:23] 2025-02-27 07:55:08,976 | WARNING  | process 1943323 can no longer be monitored (due to stat problems) - aborting
[2025-02-27 08:55:23] 2025-02-27 07:55:09,439 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-27 08:55:23] 2025-02-27 07:55:09,716 | INFO     | number of running child processes to parent process 1943323: 1
[2025-02-27 08:55:23] 2025-02-27 07:55:09,717 | INFO     | maximum number of monitored processes: 6
[2025-02-27 08:55:23] 2025-02-27 07:55:09,717 | INFO     | aborting job monitoring since job object (job id=6523023318) has expired
[2025-02-27 08:55:23] 2025-02-27 07:55:09,884 | INFO     | --- collectZombieJob: --- 10, [1943323]
[2025-02-27 08:55:23] 2025-02-27 07:55:09,885 | INFO     | zombie collector waiting for pid 1943323
[2025-02-27 08:55:23] 2025-02-27 07:55:09,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-27 08:55:23] 2025-02-27 07:55:09,885 | INFO     | collected zombie processes
[2025-02-27 08:55:23] 2025-02-27 07:55:09,885 | INFO     | will attempt to kill all subprocesses of pid=1943323
[2025-02-27 08:55:23] 2025-02-27 07:55:10,161 | INFO     | process IDs to be killed: [1943323] (in reverse order)
[2025-02-27 08:55:23] 2025-02-27 07:55:10,390 | WARNING  | found no corresponding commands to process id(s)
[2025-02-27 08:55:23] 2025-02-27 07:55:10,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-27 08:55:23] 2025-02-27 07:55:10,413 | INFO     | did not find any defunct processes belonging to 1943323
[2025-02-27 08:55:23] 2025-02-27 07:55:10,431 | INFO     | did not find any defunct processes belonging to 1943323
[2025-02-27 08:55:23] 2025-02-27 07:55:10,431 | INFO     | ready for new job
[2025-02-27 08:55:23] 2025-02-27 07:55:10,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-27 08:55:23] 2025-02-27 07:55:10,434 | INFO     | **************************************
[2025-02-27 08:55:23] 2025-02-27 07:55:10,435 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-27 08:55:23] 2025-02-27 07:55:10,435 | INFO     | **************************************
[2025-02-27 08:55:23] 2025-02-27 07:55:10,435 | INFO     | 
[2025-02-27 08:55:23] 2025-02-27 07:55:10,443 | INFO     | architecture information:
[2025-02-27 08:55:23] 2025-02-27 07:55:10,444 | INFO     | executing command: cat /etc/os-release
[2025-02-27 08:55:23] 2025-02-27 07:55:10,465 | INFO     | cat /etc/os-release:
[2025-02-27 08:55:23] NAME="CentOS Linux"
[2025-02-27 08:55:23] VERSION="7 (Core)"
[2025-02-27 08:55:23] ID="centos"
[2025-02-27 08:55:23] ID_LIKE="rhel fedora"
[2025-02-27 08:55:23] VERSION_ID="7"
[2025-02-27 08:55:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-27 08:55:23] ANSI_COLOR="0;31"
[2025-02-27 08:55:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-27 08:55:23] HOME_URL="https://www.centos.org/"
[2025-02-27 08:55:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-27 08:55:23] 
[2025-02-27 08:55:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-27 08:55:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-27 08:55:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-27 08:55:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-27 08:55:23] 
[2025-02-27 08:55:23] 2025-02-27 07:55:10,466 | INFO     | **************************************
[2025-02-27 08:55:23] 2025-02-27 07:55:10,969 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-02-27 08:55:23] 2025-02-27 07:55:10,993 | INFO     | sufficient remaining disk space (3360140820480 B)
[2025-02-27 08:55:23] 2025-02-27 07:55:10,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-27 08:55:23] 2025-02-27 07:55:10,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-27 08:55:23] 2025-02-27 07:55:10,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-27 08:55:23] 2025-02-27 07:55:10,994 | INFO     | aborting loop
[2025-02-27 08:55:23] 2025-02-27 07:55:10,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-27 08:55:23] 2025-02-27 07:55:11,154 | INFO     | all payload control threads have been joined
[2025-02-27 08:55:23] 2025-02-27 07:55:11,325 | INFO     | all job control threads have been joined
[2025-02-27 08:55:23] 2025-02-27 07:55:11,456 | INFO     | all data control threads have been joined
[2025-02-27 08:55:23] 2025-02-27 07:55:11,926 | INFO     | found 0 job(s) in 20 queues
[2025-02-27 08:55:23] 2025-02-27 07:55:11,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-27 08:55:23] 2025-02-27 07:55:11,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-27 08:55:23] 2025-02-27 07:55:11,995 | INFO     | [job] retrieve thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:12,000 | INFO     | [job] job monitor thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:12,102 | INFO     | [payload] validate_post thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:12,159 | INFO     | [payload] control thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:12,331 | INFO     | [job] control thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:12,429 | INFO     | [job] validate thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:12,461 | INFO     | [data] control thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:12,474 | INFO     | [payload] execute_payloads thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:12,911 | INFO     | [payload] validate_pre thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:12,969 | INFO     | [job] create_data_payload thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:13,001 | INFO     | [data] copytool_out thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:13,004 | INFO     | [payload] failed_post thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:13,204 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:13,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-27 08:55:23] 2025-02-27 07:55:13,385 | INFO     | [data] copytool_in thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:13,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-27 08:55:23] 2025-02-27 07:55:14,854 | INFO     | [job] queue monitor thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:17,252 | INFO     | [data] queue_monitor thread has finished
[2025-02-27 08:55:23] 2025-02-27 07:55:18,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22389884819264)>', '<ExcThread(monitor, started 22389639292672)>']
[2025-02-27 08:55:23] 2025-02-27 07:55:18,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-27 08:55:23] 2025-02-27 07:55:18,961 | INFO     | [monitor] control thread has ended
[2025-02-27 08:55:23] 2025-02-27 07:55:23,123 | INFO     | all workflow threads have been joined
[2025-02-27 08:55:23] 2025-02-27 07:55:23,124 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-27 08:55:23] 2025-02-27 07:55:23,124 | INFO     | traces error code: 0
[2025-02-27 08:55:23] 2025-02-27 07:55:23,124 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-27 08:55:23] 2025-02-27 07:55:23,304 [wrapper] ==== pilot stdout END ====
[2025-02-27 08:55:23] 2025-02-27 07:55:23,308 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-27 08:55:23] 2025-02-27 07:55:23,311 [wrapper] pilotpid: 1935839
[2025-02-27 08:55:23] 2025-02-27 07:55:23,316 [wrapper] Pilot exit status: 0
[2025-02-27 08:55:23] 2025-02-27 07:55:23,329 [wrapper] pandaids: 6523023318
[2025-02-27 08:55:23] 2025-02-27 07:55:23,457 [wrapper] cleanup supervisor_pilot 3450060 1935840
[2025-02-27 08:55:23] 2025-02-27 07:55:23,462 [wrapper] Test setup, not cleaning
[2025-02-27 08:55:23] 2025-02-27 07:55:23,469 [wrapper] apfmon messages muted
[2025-02-27 08:55:23] 2025-02-27 07:55:23,472 [wrapper] ==== wrapper stdout END ====
[2025-02-27 08:55:23] 2025-02-27 07:55:23,476 [wrapper] ==== wrapper stderr END ====
[2025-02-27 08:55:23]  *** Error codes and diagnostics ***
[2025-02-27 08:55:23]     "exeErrorCode": 0,
[2025-02-27 08:55:23]     "exeErrorDiag": "",
[2025-02-27 08:55:23]     "pilotErrorCode": 0,
[2025-02-27 08:55:23]     "pilotErrorDiag": "",
[2025-02-27 08:55:23]  *** Listing of results directory ***
[2025-02-27 08:55:23] total 657104
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc    491065 Feb 22 16:51 pilot3.tar.gz
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc      5118 Feb 22 16:56 queuedata.json
[2025-02-27 08:55:23] -rwx------ 1 boinc boinc     35865 Feb 22 16:56 runpilot2-wrapper.sh
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc       100 Feb 27 03:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-27 08:55:23] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 03:35 run_atlas
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc       105 Feb 27 03:35 job.xml
[2025-02-27 08:55:23] -rw-r--r-- 2 boinc boinc 342327629 Feb 27 03:35 EVNT.43078917._002563.pool.root.1
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc      6677 Feb 27 03:35 init_data.xml
[2025-02-27 08:55:23] -rw-r--r-- 2 boinc boinc     17569 Feb 27 03:35 start_atlas.sh
[2025-02-27 08:55:23] drwxrwx--x 2 boinc boinc      4096 Feb 27 03:35 shared
[2025-02-27 08:55:23] -rw-r--r-- 2 boinc boinc    503559 Feb 27 03:35 input.tar.gz
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc         0 Feb 27 03:35 boinc_lockfile
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc      2547 Feb 27 03:35 pandaJob.out
[2025-02-27 08:55:23] -rw------- 1 boinc boinc       424 Feb 27 03:35 setup.sh.local
[2025-02-27 08:55:23] -rw------- 1 boinc boinc    989853 Feb 27 03:35 agis_schedconf.cvmfs.json
[2025-02-27 08:55:23] drwx------ 4 boinc boinc      4096 Feb 27 03:35 pilot3
[2025-02-27 08:55:23] -rw------- 1 boinc boinc 321851232 Feb 27 08:54 HITS.43078919._088339.pool.root.1
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc       531 Feb 27 08:54 boinc_task_state.xml
[2025-02-27 08:55:23] -rw------- 1 boinc boinc        95 Feb 27 08:54 pilot_heartbeat.json
[2025-02-27 08:55:23] -rw------- 1 boinc boinc      1024 Feb 27 08:54 memory_monitor_summary.json
[2025-02-27 08:55:23] -rw------- 1 boinc boinc   1569202 Feb 27 08:54 agis_ddmendpoints.agis.ALL.json
[2025-02-27 08:55:23] -rw------- 1 boinc boinc    402692 Feb 27 08:54 log.43078919._088339.job.log.tgz.1
[2025-02-27 08:55:23] -rw------- 1 boinc boinc      7695 Feb 27 08:55 heartbeat.json
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc      8192 Feb 27 08:55 boinc_mmap_file
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc        28 Feb 27 08:55 wrapper_checkpoint.txt
[2025-02-27 08:55:23] -rw------- 1 boinc boinc      4226 Feb 27 08:55 pilotlog.txt
[2025-02-27 08:55:23] -rw------- 1 boinc boinc   2046633 Feb 27 08:55 log.43078919._088339.job.log.1
[2025-02-27 08:55:23] -rw------- 1 boinc boinc       357 Feb 27 08:55 output.list
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc       620 Feb 27 08:55 runtime_log
[2025-02-27 08:55:23] -rw------- 1 boinc boinc   2467840 Feb 27 08:55 result.tar.gz
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc     11424 Feb 27 08:55 runtime_log.err
[2025-02-27 08:55:23] -rw------- 1 boinc boinc       665 Feb 27 08:55 GrYKDmD3656nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmnFuKDmK24VNo.diag
[2025-02-27 08:55:23] -rw-r--r-- 1 boinc boinc     21376 Feb 27 08:55 stderr.txt
[2025-02-27 08:55:23] HITS file was successfully produced:
[2025-02-27 08:55:23] -rw------- 1 boinc boinc 321851232 Feb 27 08:54 shared/HITS.pool.root.1
[2025-02-27 08:55:23]  *** Contents of shared directory: ***
[2025-02-27 08:55:23] total 651548
[2025-02-27 08:55:23] -rw-r--r-- 2 boinc boinc 342327629 Feb 27 03:35 ATLAS.root_0
[2025-02-27 08:55:23] -rw-r--r-- 2 boinc boinc     17569 Feb 27 03:35 start_atlas.sh
[2025-02-27 08:55:23] -rw-r--r-- 2 boinc boinc    503559 Feb 27 03:35 input.tar.gz
[2025-02-27 08:55:23] -rw------- 1 boinc boinc 321851232 Feb 27 08:54 HITS.pool.root.1
[2025-02-27 08:55:23] -rw------- 1 boinc boinc   2467840 Feb 27 08:55 result.tar.gz
08:55:24 (1931853): run_atlas exited; CPU time 72399.888850
08:55:24 (1931853): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN