Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 01:36:53 (22732): Detected: vboxwrapper 26206
2025-02-23 01:36:53 (22732): Detected: BOINC client v8.0.2
2025-02-23 01:36:54 (22732): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-02-23 01:36:54 (22732): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 01:36:55 (22732): Create VM. (boinc_6f3e79be3eb7156d, slot#2)
2025-02-23 01:36:55 (22732): Setting Memory Size for VM. (4800MB)
2025-02-23 01:36:56 (22732): Setting CPU Count for VM. (8)
2025-02-23 01:36:56 (22732): Setting Chipset Options for VM.
2025-02-23 01:36:56 (22732): Setting Graphics Controller Options for VM.
2025-02-23 01:36:56 (22732): Setting Boot Options for VM.
2025-02-23 01:36:57 (22732): Setting Network Configuration for NAT.
2025-02-23 01:36:57 (22732): Enabling VM Network Access.
2025-02-23 01:36:57 (22732): Disabling USB Support for VM.
2025-02-23 01:36:57 (22732): Disabling COM Port Support for VM.
2025-02-23 01:36:58 (22732): Disabling LPT Port Support for VM.
2025-02-23 01:36:58 (22732): Disabling Audio Support for VM.
2025-02-23 01:36:58 (22732): Disabling Clipboard Support for VM.
2025-02-23 01:36:59 (22732): Disabling Drag and Drop Support for VM.
2025-02-23 01:36:59 (22732): Adding storage controller(s) to VM.
2025-02-23 01:36:59 (22732): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 01:37:02 (22732): Adding VirtualBox Guest Additions to VM.
2025-02-23 01:37:02 (22732): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 01:37:02 (22732): forwarding host port 62769 to guest port 80
2025-02-23 01:37:03 (22732): Enabling remote desktop for VM.
2025-02-23 01:37:03 (22732): Required extension pack not installed, remote desktop not enabled.
2025-02-23 01:37:03 (22732): Enabling shared directory for VM.
2025-02-23 01:37:03 (22732): Starting VM using VBoxManage interface. (boinc_6f3e79be3eb7156d, slot#2)
2025-02-23 01:37:08 (22732): Successfully started VM. (PID = '30644')
2025-02-23 01:37:08 (22732): Reporting VM Process ID to BOINC.
2025-02-23 01:37:08 (22732): Guest Log: BIOS: VirtualBox 7.1.6
2025-02-23 01:37:08 (22732): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 01:37:08 (22732): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 01:37:08 (22732): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 01:37:08 (22732): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 01:37:08 (22732): Detected: Web Application Enabled (http://localhost:62769)
2025-02-23 01:37:08 (22732): Preference change detected
2025-02-23 01:37:08 (22732): Setting CPU throttle for VM. (60%)
2025-02-23 01:37:08 (22732): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 01:37:10 (22732): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 01:37:10 (22732): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 01:37:13 (22732): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 01:37:13 (22732): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 01:37:13 (22732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 01:37:20 (22732): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 01:37:20 (22732): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 01:37:25 (22732): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 01:37:25 (22732): Guest Log: 00:00:00.000067 main     Log opened 2025-02-23T01:37:23.833664000Z
2025-02-23 01:37:25 (22732): Guest Log: 00:00:00.000134 main     OS Product: Linux
2025-02-23 01:37:25 (22732): Guest Log: 00:00:00.000173 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 01:37:25 (22732): Guest Log: 00:00:00.000188 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 01:37:25 (22732): Guest Log: 00:00:00.000200 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 01:37:25 (22732): Guest Log: 00:00:00.000200 main     Process ID: 1374
2025-02-23 01:37:25 (22732): Guest Log: 00:00:00.000201 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 01:37:25 (22732): Guest Log: 00:00:00.000556 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 01:37:25 (22732): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 01:37:25 (22732): Guest Log: [INFO] Mounting shared directory
2025-02-23 01:37:25 (22732): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 01:37:32 (22732): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 01:37:32 (22732): Guest Log: [INFO] Detected branch: prod
2025-02-23 01:37:32 (22732): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 01:37:32 (22732): Guest Log: Copying input files
2025-02-23 01:37:33 (22732): Guest Log: Copied input files into RunAtlas.
2025-02-23 01:37:33 (22732): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 01:37:33 (22732): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 01:37:33 (22732): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 01:37:33 (22732): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 01:37:35 (22732): Guest Log: 00:00:10.002014 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 449 957 000ns (GuestNow=1 740 292 655 284 772 000 ns GuestLast=1 740 274 643 834 815 000 ns fSetTimeLastLoop=true )
2025-02-23 01:37:44 (22732): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 01:37:44 (22732): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 01:37:44 (22732): Guest Log: 2.6.3.0 1657 0 32180 142966 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 01:37:44 (22732): Guest Log: copied the webapp to /var/www
2025-02-23 01:37:44 (22732): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-23 01:37:44 (22732): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-23 01:37:45 (22732): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 01:37:45 (22732): Guest Log:  *** Starting ATLAS job. (PandaID=6522812523 taskID=43078919) ***
2025-02-23 03:17:11 (22732): Status Report: Elapsed Time: '6000.000000'
2025-02-23 03:17:11 (22732): Status Report: CPU Time: '23394.000000'
2025-02-23 04:57:15 (22732): Status Report: Elapsed Time: '12000.000000'
2025-02-23 04:57:15 (22732): Status Report: CPU Time: '52129.187500'
2025-02-23 05:45:15 (22732): Guest Log:  *** Job finished ***
2025-02-23 05:45:15 (22732): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:05,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:05,288 | INFO     | [data] copytool_out thread has finished
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:09,099 | INFO     | [data] queue_monitor thread has finished
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:09,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140209562240832)>', '<ExcThread(monitor, started 140208402069248)>']
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:10,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:10,096 | INFO     | [monitor] control thread has ended
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,727 | INFO     | all workflow threads have been joined
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,727 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,727 | INFO     | traces error code: 0
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,856 [wrapper] ==== pilot stdout END ====
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,859 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,861 [wrapper] pilotpid: 6024
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,864 [wrapper] Pilot exit status: 0
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,960 [wrapper] pandaids: 6522812523
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,975 [wrapper] cleanup supervisor_pilot 15514 6025
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,978 [wrapper] Test setup, not cleaning
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,983 [wrapper] apfmon messages muted
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,985 [wrapper] ==== wrapper stdout END ====
2025-02-23 05:45:15 (22732): Guest Log: 2025-02-23 10:45:14,987 [wrapper] ==== wrapper stderr END ====
2025-02-23 05:45:15 (22732): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 05:45:15 (22732): Guest Log:     "exeErrorCode": 0,
2025-02-23 05:45:15 (22732): Guest Log:     "exeErrorDiag": "",
2025-02-23 05:45:15 (22732): Guest Log:     "pilotErrorCode": 0,
2025-02-23 05:45:15 (22732): Guest Log:     "pilotErrorDiag": "",
2025-02-23 05:45:15 (22732): Guest Log:  *** Listing of results directory ***
2025-02-23 05:45:15 (22732): Guest Log: total 325960
2025-02-23 05:45:15 (22732): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 22 07:44 pilot3.tar.gz
2025-02-23 05:45:15 (22732): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 22 07:59 queuedata.json
2025-02-23 05:45:15 (22732): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 22 08:03 runpilot2-wrapper.sh
2025-02-23 05:45:15 (22732): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 23 06:37 start_atlas.sh
2025-02-23 05:45:15 (22732): Guest Log: -rwxr-xr-x. 1 atlas atlas    503559 Feb 23 06:37 input.tar.gz
2025-02-23 05:45:15 (22732): Guest Log: -rwxr-xr-x. 1 atlas atlas     11891 Feb 23 06:37 init_data.xml
2025-02-23 05:45:15 (22732): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 23 06:37 EVNT.43078917._002432.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 05:45:15 (22732): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Feb 23 06:37 pandaJob.out
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas       424 Feb 23 06:37 setup.sh.local
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas    987744 Feb 23 06:38 agis_schedconf.cvmfs.json
2025-02-23 05:45:15 (22732): Guest Log: drwx------. 4 atlas atlas      4096 Feb 23 06:38 pilot3
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas 327220865 Feb 23 10:44 HITS.43078919._086729.pool.root.1
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas      1027 Feb 23 10:44 memory_monitor_summary.json
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas        95 Feb 23 10:44 pilot_heartbeat.json
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 23 10:44 agis_ddmendpoints.agis.ALL.json
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas    386387 Feb 23 10:44 log.43078919._086729.job.log.tgz.1
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas      7679 Feb 23 10:45 heartbeat.json
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 23 10:45 pilotlog.txt
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas   1024255 Feb 23 10:45 log.43078919._086729.job.log.1
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas       357 Feb 23 10:45 output.list
2025-02-23 05:45:15 (22732): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 23 10:45 runtime_log
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas   1433600 Feb 23 10:45 result.tar.gz
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas       668 Feb 23 10:45 ZZ7LDmfez56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPitKDm8FzgKn.diag
2025-02-23 05:45:15 (22732): Guest Log: -rw-r--r--. 1 atlas atlas     10959 Feb 23 10:45 runtime_log.err
2025-02-23 05:45:15 (22732): Guest Log: Looking for outputfile HITS.43078919._086729.pool.root.1
2025-02-23 05:45:15 (22732): Guest Log: HITS file was successfully produced
2025-02-23 05:45:15 (22732): Guest Log: -rw-------. 1 atlas atlas 327220865 Feb 23 10:44 /home/atlas/RunAtlas/HITS.43078919._086729.pool.root.1
2025-02-23 05:45:16 (22732): Guest Log: Successfully finished the ATLAS job!
2025-02-23 05:45:16 (22732): Guest Log: Copying the results back to the shared directory!
2025-02-23 05:45:16 (22732): Guest Log:  *** Contents of shared directory: ***
2025-02-23 05:45:16 (22732): Guest Log: total 653932
2025-02-23 05:45:16 (22732): Guest Log: -rwxrwxrwx. 1 root root 340434074 Feb 23 06:36 ATLAS.root_0
2025-02-23 05:45:16 (22732): Guest Log: -rwxrwxrwx. 1 root root 327220865 Feb 23 10:45 HITS.pool.root.1
2025-02-23 05:45:16 (22732): Guest Log: -rwxrwxrwx. 1 root root     11891 Feb 23 06:36 init_data.xml
2025-02-23 05:45:16 (22732): Guest Log: -rwxrwxrwx. 1 root root    503559 Feb 22 18:32 input.tar.gz
2025-02-23 05:45:16 (22732): Guest Log: -rwxrwxrwx. 1 root root   1433600 Feb 23 10:45 result.tar.gz
2025-02-23 05:45:16 (22732): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 22 18:32 start_atlas.sh
2025-02-23 05:45:16 (22732): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 05:45:16 (22732): VM Completion File Detected.
2025-02-23 05:45:16 (22732): Powering off VM.
2025-02-23 05:45:17 (22732): Successfully stopped VM.
2025-02-23 05:45:17 (22732): Deregistering VM. (boinc_6f3e79be3eb7156d, slot#2)
2025-02-23 05:45:17 (22732): Removing network bandwidth throttle group from VM.
2025-02-23 05:45:17 (22732): Removing VM from VirtualBox.
05:45:22 (22732): called boinc_finish(0)

</stderr_txt>
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