Name voONDmVs356nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmj0tKDmIoOZhm_0
Workunit 230511118
Created 22 Feb 2025, 12:33:54 UTC
Sent 22 Feb 2025, 17:16:35 UTC
Report deadline 2 Mar 2025, 17:16:35 UTC
Received 22 Feb 2025, 19:20:17 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 10852359
Run time 6 min 41 sec
CPU time 3 min 12 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 24.72 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 781.86 MB
Peak swap size 16.38 GB
Peak disk usage 658.71 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:47:06 (26760): wrapper (7.7.26015): starting
19:47:06 (26760): wrapper: running run_atlas (--nthreads 12)
[2025-02-22 19:47:06] Arguments: --nthreads 12
[2025-02-22 19:47:06] Threads: 12
[2025-02-22 19:47:06] Checking for CVMFS
[2025-02-22 19:47:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-22 19:47:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-22 19:47:06] Running cvmfs_config stat atlas.cern.ch
[2025-02-22 19:47:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-22 19:47:07] 2.11.2.0 13457 555 75772 142948 1 185 22784518 25165824 0 130560 0 5637528 99.980 273071 6347 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-02-22 19:47:07] CVMFS is ok
[2025-02-22 19:47:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 19:47:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 19:47:07] Further information can be found at the LHC@home message board.
[2025-02-22 19:47:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 19:47:07] Checking for apptainer binary...
[2025-02-22 19:47:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-22 19:47:07] Running /usr/bin/apptainer --version
[2025-02-22 19:47:07] apptainer version 1.3.2-1.el7
[2025-02-22 19:47:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 19:47:11] cg-vwn116.simple-grid.lan
[2025-02-22 19:47:11] apptainer works
[2025-02-22 19:47:11] Set ATHENA_PROC_NUMBER=12
[2025-02-22 19:47:11] Set ATHENA_CORE_NUMBER=12
[2025-02-22 19:47:11] Starting ATLAS job with PandaID=6522974047
[2025-02-22 19:47:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 19:53:44]  *** The last 200 lines of the pilot log: ***
[2025-02-22 19:53:44] 2025-02-22 18:52:53,797 | INFO     | monitor loop #72: job 0:6522974047 is in state 'failed'
[2025-02-22 19:53:44] 2025-02-22 18:52:53,798 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-22 19:53:44] 2025-02-22 18:52:54,388 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-22 19:53:44] 2025-02-22 18:52:54,390 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6522974047/memory_monitor_output.txt
[2025-02-22 19:53:44] 2025-02-22 18:52:54,390 | INFO     | memory summary dictionary not yet available
[2025-02-22 19:53:44] 2025-02-22 18:52:54,392 | INFO     | ..............................
[2025-02-22 19:53:44] 2025-02-22 18:52:54,393 | INFO     | . Timing measurements:
[2025-02-22 19:53:44] 2025-02-22 18:52:54,393 | INFO     | . get job = 0 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,394 | INFO     | . initial setup = 2 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,394 | INFO     | . payload setup = 24 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,394 | INFO     | . stage-in = 0 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,395 | INFO     | . payload execution = 223 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,395 | INFO     | . stage-out = 0 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,395 | INFO     | . log creation = 0 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,396 | INFO     | ..............................
[2025-02-22 19:53:44] 2025-02-22 18:52:54,433 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#7/#20)
[2025-02-22 19:53:44] 2025-02-22 18:52:54,437 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-22 19:53:44] 2025-02-22 18:52:54,438 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6522974047/pilotlog.txt
[2025-02-22 19:53:44] 2025-02-22 18:52:54,497 | WARNING  | 
[2025-02-22 19:53:44] [begin log extracts]
[2025-02-22 19:53:44] - Log from pilotlog.txt -
[2025-02-22 19:53:44] 2025-02-22 18:52:51,293 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-22 19:53:44] 2025-02-22 18:52:51,396 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#6/#20)
[2025-02-22 19:53:44] 2025-02-22 18:52:53,797 | INFO     | monitor loop #72: job 0:6522974047 is in state 'failed'
[2025-02-22 19:53:44] 2025-02-22 18:52:53,798 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-02-22 19:53:44] 2025-02-22 18:52:54,388 | INFO     | CPU arch script returned: x86-64-v1
[2025-02-22 19:53:44] 2025-02-22 18:52:54,390 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6522974047/memory_monitor_output.txt
[2025-02-22 19:53:44] 2025-02-22 18:52:54,390 | INFO     | memory summary dictionary not yet available
[2025-02-22 19:53:44] 2025-02-22 18:52:54,392 | INFO     | ..............................
[2025-02-22 19:53:44] 2025-02-22 18:52:54,393 | INFO     | . Timing measurements:
[2025-02-22 19:53:44] 2025-02-22 18:52:54,393 | INFO     | . get job = 0 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,394 | INFO     | . initial setup = 2 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,394 | INFO     | . payload setup = 24 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,394 | INFO     | . stage-in = 0 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,395 | INFO     | . payload execution = 223 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,395 | INFO     | . stage-out = 0 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,395 | INFO     | . log creation = 0 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,396 | INFO     | ..............................
[2025-02-22 19:53:44] 2025-02-22 18:52:54,433 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#7/#20)
[2025-02-22 19:53:44] 2025-02-22 18:52:54,437 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-02-22 19:53:44] 2025-02-22 18:52:54,438 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6522974047/pilotlog.txt
[2025-02-22 19:53:44] [end log extracts]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,670 | INFO     | 
[2025-02-22 19:53:44] 2025-02-22 18:52:54,671 | INFO     | job summary report
[2025-02-22 19:53:44] 2025-02-22 18:52:54,671 | INFO     | --------------------------------------------------
[2025-02-22 19:53:44] 2025-02-22 18:52:54,672 | INFO     | PanDA job id: 6522974047
[2025-02-22 19:53:44] 2025-02-22 18:52:54,672 | INFO     | task id: 43205094
[2025-02-22 19:53:44] 2025-02-22 18:52:54,672 | INFO     | errors: (none)
[2025-02-22 19:53:44] 2025-02-22 18:52:54,673 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 19:53:44] 2025-02-22 18:52:54,673 | INFO     | pilot state: failed 
[2025-02-22 19:53:44] 2025-02-22 18:52:54,673 | INFO     | transexitcode: 0
[2025-02-22 19:53:44] 2025-02-22 18:52:54,674 | INFO     | exeerrorcode: 0
[2025-02-22 19:53:44] 2025-02-22 18:52:54,674 | INFO     | exeerrordiag: 
[2025-02-22 19:53:44] 2025-02-22 18:52:54,674 | INFO     | exitcode: 0
[2025-02-22 19:53:44] 2025-02-22 18:52:54,675 | INFO     | exitmsg: 
[2025-02-22 19:53:44] 2025-02-22 18:52:54,675 | INFO     | cpuconsumptiontime: 156 s
[2025-02-22 19:53:44] 2025-02-22 18:52:54,676 | INFO     | nevents: 0
[2025-02-22 19:53:44] 2025-02-22 18:52:54,676 | INFO     | neventsw: 0
[2025-02-22 19:53:44] 2025-02-22 18:52:54,676 | INFO     | pid: 4535
[2025-02-22 19:53:44] 2025-02-22 18:52:54,677 | INFO     | pgrp: 4535
[2025-02-22 19:53:44] 2025-02-22 18:52:54,677 | INFO     | corecount: 12
[2025-02-22 19:53:44] 2025-02-22 18:52:54,677 | INFO     | event service: False
[2025-02-22 19:53:44] 2025-02-22 18:52:54,678 | INFO     | sizes: {0: 2383076, 1: 2383331, 2: 2383331, 12: 2383359, 17: 2383593, 23: 2383621, 249: 2387665, 250: 2391931, 252: 2391959, 270: 2391959}
[2025-02-22 19:53:44] 2025-02-22 18:52:54,678 | INFO     | --------------------------------------------------
[2025-02-22 19:53:44] 2025-02-22 18:52:54,678 | INFO     | 
[2025-02-22 19:53:44] 2025-02-22 18:52:54,679 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-02-22 19:53:44] 2025-02-22 18:52:54,765 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,766 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,767 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,769 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,769 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,769 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,770 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,770 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 19:53:44] 2025-02-22 18:52:54,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,773 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 19:53:44] 2025-02-22 18:52:54,774 | INFO     | job 6522974047 has completed (purged errors)
[2025-02-22 19:53:44] 2025-02-22 18:52:54,774 | INFO     | overall cleanup function is called
[2025-02-22 19:53:44] 2025-02-22 18:52:55,785 | INFO     | --- collectZombieJob: --- 10, [4535]
[2025-02-22 19:53:44] 2025-02-22 18:52:55,786 | INFO     | zombie collector waiting for pid 4535
[2025-02-22 19:53:44] 2025-02-22 18:52:55,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 19:53:44] 2025-02-22 18:52:55,786 | INFO     | collected zombie processes
[2025-02-22 19:53:44] 2025-02-22 18:52:55,787 | INFO     | will attempt to kill all subprocesses of pid=4535
[2025-02-22 19:53:44] 2025-02-22 18:52:55,944 | INFO     | process IDs to be killed: [4535] (in reverse order)
[2025-02-22 19:53:44] 2025-02-22 18:52:56,095 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 19:53:44] 2025-02-22 18:52:56,096 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 19:53:44] 2025-02-22 18:52:56,102 | INFO     | did not find any defunct processes belonging to 4535
[2025-02-22 19:53:44] 2025-02-22 18:52:56,109 | INFO     | did not find any defunct processes belonging to 4535
[2025-02-22 19:53:44] 2025-02-22 18:52:56,110 | INFO     | ready for new job
[2025-02-22 19:53:44] 2025-02-22 18:52:56,111 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 19:53:44] 2025-02-22 18:52:56,114 | INFO     | **************************************
[2025-02-22 19:53:44] 2025-02-22 18:52:56,115 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 19:53:44] 2025-02-22 18:52:56,115 | INFO     | **************************************
[2025-02-22 19:53:44] 2025-02-22 18:52:56,116 | INFO     | 
[2025-02-22 19:53:44] 2025-02-22 18:52:56,118 | INFO     | pilot is running in a VM
[2025-02-22 19:53:44] 2025-02-22 18:52:56,118 | INFO     | architecture information:
[2025-02-22 19:53:44] 2025-02-22 18:52:56,120 | INFO     | executing command: cat /etc/os-release
[2025-02-22 19:53:44] 2025-02-22 18:52:56,181 | INFO     | cat /etc/os-release:
[2025-02-22 19:53:44] NAME="CentOS Linux"
[2025-02-22 19:53:44] VERSION="7 (Core)"
[2025-02-22 19:53:44] ID="centos"
[2025-02-22 19:53:44] ID_LIKE="rhel fedora"
[2025-02-22 19:53:44] VERSION_ID="7"
[2025-02-22 19:53:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 19:53:44] ANSI_COLOR="0;31"
[2025-02-22 19:53:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 19:53:44] HOME_URL="https://www.centos.org/"
[2025-02-22 19:53:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 19:53:44] 
[2025-02-22 19:53:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 19:53:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 19:53:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 19:53:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 19:53:44] 
[2025-02-22 19:53:44] 2025-02-22 18:52:56,182 | INFO     | **************************************
[2025-02-22 19:53:44] 2025-02-22 18:52:56,686 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-02-22 19:53:44] 2025-02-22 18:52:56,749 | INFO     | sufficient remaining disk space (256387317760 B)
[2025-02-22 19:53:44] 2025-02-22 18:52:56,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 19:53:44] 2025-02-22 18:52:56,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 19:53:44] 2025-02-22 18:52:56,752 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 19:53:44] 2025-02-22 18:52:56,753 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 19:53:44] 2025-02-22 18:52:56,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 19:53:44] 2025-02-22 18:52:56,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 19:53:44] 2025-02-22 18:52:56,893 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 19:53:44] 2025-02-22 18:52:57,268 | INFO     | all payload control threads have been joined
[2025-02-22 19:53:44] 2025-02-22 18:52:57,277 | INFO     | all data control threads have been joined
[2025-02-22 19:53:44] 2025-02-22 18:52:57,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 19:53:44] 2025-02-22 18:52:57,310 | INFO     | aborting loop
[2025-02-22 19:53:44] 2025-02-22 18:52:57,451 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#8/#20)
[2025-02-22 19:53:44] 2025-02-22 18:52:57,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 19:53:44] 2025-02-22 18:52:57,757 | INFO     | [job] retrieve thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:52:57,762 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:52:57,794 | INFO     | all job control threads have been joined
[2025-02-22 19:53:44] 2025-02-22 18:52:58,115 | INFO     | [data] copytool_in thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:52:58,205 | INFO     | [job] validate thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:52:58,275 | INFO     | [payload] control thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:52:58,283 | INFO     | [data] control thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:52:58,316 | INFO     | [job] job monitor thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:52:58,434 | INFO     | [payload] failed_post thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:52:58,435 | INFO     | [payload] validate_post thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:52:58,687 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:52:58,799 | INFO     | [job] control thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:52:59,229 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:52:59,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 19:53:44] 2025-02-22 18:52:59,748 | INFO     | [data] copytool_out thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:53:00,458 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#9/#20)
[2025-02-22 19:53:44] 2025-02-22 18:53:00,689 | INFO     | [job] queue monitor thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:53:00,900 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:53:03,461 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#10/#20)
[2025-02-22 19:53:44] 2025-02-22 18:53:06,478 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#11/#20)
[2025-02-22 19:53:44] 2025-02-22 18:53:09,494 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#12/#20)
[2025-02-22 19:53:44] 2025-02-22 18:53:12,510 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#13/#20)
[2025-02-22 19:53:44] 2025-02-22 18:53:15,527 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#14/#20)
[2025-02-22 19:53:44] 2025-02-22 18:53:18,543 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#15/#20)
[2025-02-22 19:53:44] 2025-02-22 18:53:21,559 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#16/#20)
[2025-02-22 19:53:44] 2025-02-22 18:53:24,576 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#17/#20)
[2025-02-22 19:53:44] 2025-02-22 18:53:27,592 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#18/#20)
[2025-02-22 19:53:44] 2025-02-22 18:53:30,608 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#19/#20)
[2025-02-22 19:53:44] 2025-02-22 18:53:33,624 | INFO     | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#20/#20)
[2025-02-22 19:53:44] 2025-02-22 18:53:36,640 | WARNING  | file copy failure: path does not exist: /var/lib/boinc/slots/1/PanDA_Pilot-6522974047/memory_monitor_summary.json
[2025-02-22 19:53:44] 2025-02-22 18:53:36,642 | WARNING  | failed to copy memory monitor output: error code: 1103, message: No such file or directory
[2025-02-22 19:53:44] details: ('file copy failure: path does not exist: /var/lib/boinc/slots/1/PanDA_Pilot-6522974047/memory_monitor_summary.json',)
[2025-02-22 19:53:44] 2025-02-22 18:53:36,671 | INFO     | found no lingering processes
[2025-02-22 19:53:44] 2025-02-22 18:53:36,672 | INFO     | CPU consumption time: 272.93 s (rounded to 273 s)
[2025-02-22 19:53:44] 2025-02-22 18:53:36,673 | WARNING  | main payload execution returned non-zero exit code: 65
[2025-02-22 19:53:44] 2025-02-22 18:53:36,673 | INFO     | file does not exist: /var/lib/boinc/slots/1/PanDA_Pilot-6522974047/payload.stderr
[2025-02-22 19:53:44] 2025-02-22 18:53:36,674 | WARNING  | found no payload stdout
[2025-02-22 19:53:44] 2025-02-22 18:53:36,675 | WARNING  | job report does not exist: /var/lib/boinc/slots/1/PanDA_Pilot-6522974047/jobReport.json
[2025-02-22 19:53:44] 2025-02-22 18:53:36,676 | WARNING  | metadata does not exist: /var/lib/boinc/slots/1/PanDA_Pilot-6522974047/metadata.xml
[2025-02-22 19:53:44] 2025-02-22 18:53:36,676 | WARNING  | file does not exist: /var/lib/boinc/slots/1/PanDA_Pilot-6522974047/metadata.xml
[2025-02-22 19:53:44] 2025-02-22 18:53:36,677 | INFO     | generated guid for lfn=HITS.43205094._036484.pool.root.1: 32FE591E-6135-4904-81C1-FCF01FC57CE3
[2025-02-22 19:53:44] 2025-02-22 18:53:36,677 | WARNING  | aborting payload error diagnosis since an error has already been set: [65, 1187]
[2025-02-22 19:53:44] 2025-02-22 18:53:37,833 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 19:53:44] 2025-02-22 18:53:39,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140552681027392)>', '<ExcThread(monitor, started 140551638730496)>']
[2025-02-22 19:53:44] 2025-02-22 18:53:39,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 19:53:44] 2025-02-22 18:53:39,980 | INFO     | [monitor] control thread has ended
[2025-02-22 19:53:44] 2025-02-22 18:53:44,088 | INFO     | all workflow threads have been joined
[2025-02-22 19:53:44] 2025-02-22 18:53:44,089 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 19:53:44] 2025-02-22 18:53:44,090 | INFO     | traces error code: 0
[2025-02-22 19:53:44] 2025-02-22 18:53:44,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 19:53:44] 2025-02-22 18:53:44,361 [wrapper] ==== pilot stdout END ====
[2025-02-22 19:53:44] 2025-02-22 18:53:44,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 19:53:44] 2025-02-22 18:53:44,387 [wrapper] pilotpid: 30427
[2025-02-22 19:53:44] 2025-02-22 18:53:44,400 [wrapper] Pilot exit status: 0
[2025-02-22 19:53:44] 2025-02-22 18:53:44,452 [wrapper] pandaids: 6522974047
[2025-02-22 19:53:44] 2025-02-22 18:53:44,575 [wrapper] cleanup supervisor_pilot 30433 30428
[2025-02-22 19:53:44] 2025-02-22 18:53:44,588 [wrapper] Test setup, not cleaning
[2025-02-22 19:53:44] 2025-02-22 18:53:44,616 [wrapper] apfmon messages muted
[2025-02-22 19:53:44] 2025-02-22 18:53:44,629 [wrapper] ==== wrapper stdout END ====
[2025-02-22 19:53:44] 2025-02-22 18:53:44,642 [wrapper] ==== wrapper stderr END ====
[2025-02-22 19:53:44]  *** Error codes and diagnostics ***
[2025-02-22 19:53:45]     "exeErrorCode": 0,
[2025-02-22 19:53:45]     "exeErrorDiag": "",
[2025-02-22 19:53:45]     "pilotErrorCode": 0,
[2025-02-22 19:53:45]     "pilotErrorDiag": "",
[2025-02-22 19:53:45]  *** Listing of results directory ***
[2025-02-22 19:53:45] total 337664
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc    491065 Feb 22 13:28 pilot3.tar.gz
[2025-02-22 19:53:45] -rwx------. 1 boinc boinc     35865 Feb 22 13:33 runpilot2-wrapper.sh
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc      5118 Feb 22 13:33 queuedata.json
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc       100 Feb 22 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 19:53:45] -rwxr-xr-x. 1 boinc boinc      7986 Feb 22 19:47 run_atlas
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc       105 Feb 22 19:47 job.xml
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc      6119 Feb 22 19:47 init_data.xml
[2025-02-22 19:53:45] -rw-r--r--. 2 boinc boinc 341627422 Feb 22 19:47 EVNT.43092757._002104.pool.root.1
[2025-02-22 19:53:45] -rw-r--r--. 2 boinc boinc     17569 Feb 22 19:47 start_atlas.sh
[2025-02-22 19:53:45] drwxrwx--x. 2 boinc boinc        68 Feb 22 19:47 shared
[2025-02-22 19:53:45] -rw-r--r--. 2 boinc boinc    503550 Feb 22 19:47 input.tar.gz
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc         0 Feb 22 19:47 boinc_lockfile
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc      2544 Feb 22 19:47 pandaJob.out
[2025-02-22 19:53:45] -rw-------. 1 boinc boinc       424 Feb 22 19:47 setup.sh.local
[2025-02-22 19:53:45] -rw-------. 1 boinc boinc    987736 Feb 22 19:47 agis_schedconf.cvmfs.json
[2025-02-22 19:53:45] -rw-------. 1 boinc boinc   1582569 Feb 22 19:47 agis_ddmendpoints.agis.ALL.json
[2025-02-22 19:53:45] drwx------. 4 boinc boinc      4096 Feb 22 19:47 pilot3
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc       526 Feb 22 19:52 boinc_task_state.xml
[2025-02-22 19:53:45] -rw-------. 1 boinc boinc     46462 Feb 22 19:52 log.43205094._036484.job.log.tgz.1
[2025-02-22 19:53:45] -rw-------. 1 boinc boinc        95 Feb 22 19:52 pilot_heartbeat.json
[2025-02-22 19:53:45] -rw-------. 1 boinc boinc      7810 Feb 22 19:52 heartbeat.json
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc        24 Feb 22 19:53 wrapper_checkpoint.txt
[2025-02-22 19:53:45] -rw-------. 1 boinc boinc      7638 Feb 22 19:53 pilotlog.txt
[2025-02-22 19:53:45] -rw-------. 1 boinc boinc    128901 Feb 22 19:53 log.43205094._036484.job.log.1
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc      8192 Feb 22 19:53 boinc_mmap_file
[2025-02-22 19:53:45] -rw-------. 1 boinc boinc       188 Feb 22 19:53 output.list
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc       620 Feb 22 19:53 runtime_log
[2025-02-22 19:53:45] -rw-------. 1 boinc boinc    194560 Feb 22 19:53 result.tar.gz
[2025-02-22 19:53:45] -rw-------. 1 boinc boinc       641 Feb 22 19:53 voONDmVs356nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmj0tKDmIoOZhm.diag
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc     10861 Feb 22 19:53 runtime_log.err
[2025-02-22 19:53:45] -rw-r--r--. 1 boinc boinc     22560 Feb 22 19:53 stderr.txt
[2025-02-22 19:53:45] No HITS result produced
[2025-02-22 19:53:45]  *** Contents of shared directory: ***
[2025-02-22 19:53:45] total 334328
[2025-02-22 19:53:45] -rw-r--r--. 2 boinc boinc 341627422 Feb 22 19:47 ATLAS.root_0
[2025-02-22 19:53:45] -rw-r--r--. 2 boinc boinc     17569 Feb 22 19:47 start_atlas.sh
[2025-02-22 19:53:45] -rw-r--r--. 2 boinc boinc    503550 Feb 22 19:47 input.tar.gz
[2025-02-22 19:53:45] -rw-------. 1 boinc boinc    194560 Feb 22 19:53 result.tar.gz
19:53:46 (26760): run_atlas exited; CPU time 192.284030
19:53:46 (26760): called boinc_finish(0)

</stderr_txt>
]]>


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