Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 03:19:50 (13600): Detected: vboxwrapper 26206
2025-02-23 03:19:50 (13600): Detected: BOINC client v8.0.2
2025-02-23 03:19:50 (13600): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-23 03:19:51 (13600): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 03:19:51 (13600): Create VM. (boinc_2304ba698989ef75, slot#0)
2025-02-23 03:19:52 (13600): Setting Memory Size for VM. (4200MB)
2025-02-23 03:19:52 (13600): Setting CPU Count for VM. (2)
2025-02-23 03:19:52 (13600): Setting Chipset Options for VM.
2025-02-23 03:19:52 (13600): Setting Graphics Controller Options for VM.
2025-02-23 03:19:53 (13600): Setting Boot Options for VM.
2025-02-23 03:19:53 (13600): Setting Network Configuration for NAT.
2025-02-23 03:19:53 (13600): Enabling VM Network Access.
2025-02-23 03:19:53 (13600): Disabling USB Support for VM.
2025-02-23 03:19:54 (13600): Disabling COM Port Support for VM.
2025-02-23 03:19:54 (13600): Disabling LPT Port Support for VM.
2025-02-23 03:19:54 (13600): Disabling Audio Support for VM.
2025-02-23 03:19:54 (13600): Disabling Clipboard Support for VM.
2025-02-23 03:19:55 (13600): Disabling Drag and Drop Support for VM.
2025-02-23 03:19:55 (13600): Adding storage controller(s) to VM.
2025-02-23 03:19:55 (13600): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 03:19:56 (13600): Adding VirtualBox Guest Additions to VM.
2025-02-23 03:19:56 (13600): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 03:19:56 (13600): forwarding host port 62238 to guest port 80
2025-02-23 03:19:56 (13600): Enabling remote desktop for VM.
2025-02-23 03:19:57 (13600): Required extension pack not installed, remote desktop not enabled.
2025-02-23 03:19:57 (13600): Enabling shared directory for VM.
2025-02-23 03:19:57 (13600): Starting VM using VBoxManage interface. (boinc_2304ba698989ef75, slot#0)
2025-02-23 03:20:04 (13600): Successfully started VM. (PID = '4964')
2025-02-23 03:20:04 (13600): Reporting VM Process ID to BOINC.
2025-02-23 03:20:04 (13600): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-23 03:20:04 (13600): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 03:20:04 (13600): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 03:20:04 (13600): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 03:20:04 (13600): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 03:20:04 (13600): Detected: Web Application Enabled (http://localhost:62238)
2025-02-23 03:20:04 (13600): Preference change detected
2025-02-23 03:20:04 (13600): Setting CPU throttle for VM. (100%)
2025-02-23 03:20:04 (13600): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 03:20:07 (13600): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 03:20:07 (13600): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 03:20:09 (13600): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 03:20:09 (13600): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 03:20:09 (13600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 03:21:39 (13600): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 03:21:39 (13600): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 03:21:45 (13600): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 03:21:45 (13600): Guest Log: 00:00:00.000097 main     Log opened 2025-02-23T03:21:43.479512000Z
2025-02-23 03:21:45 (13600): Guest Log: 00:00:00.000188 main     OS Product: Linux
2025-02-23 03:21:45 (13600): Guest Log: 00:00:00.000217 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 03:21:45 (13600): Guest Log: 00:00:00.000239 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 03:21:45 (13600): Guest Log: 00:00:00.000261 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 03:21:45 (13600): Guest Log: 00:00:00.000262 main     Process ID: 1264
2025-02-23 03:21:45 (13600): Guest Log: 00:00:00.000262 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 03:21:45 (13600): Guest Log: 00:00:00.000830 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 03:21:45 (13600): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 03:21:45 (13600): Guest Log: [INFO] Mounting shared directory
2025-02-23 03:21:45 (13600): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 03:21:55 (13600): Guest Log: 00:00:10.002872 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 615 261 865 000ns (GuestNow=1 740 241 288 219 693 000 ns GuestLast=1 740 280 903 481 558 000 ns fSetTimeLastLoop=true )
2025-02-23 03:21:57 (13600): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 03:21:57 (13600): Guest Log: [INFO] Detected branch: prod
2025-02-23 03:21:57 (13600): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 03:21:57 (13600): Guest Log: Copying input files
2025-02-23 03:21:59 (13600): Guest Log: Copied input files into RunAtlas.
2025-02-23 03:21:59 (13600): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 03:21:59 (13600): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 03:21:59 (13600): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 03:21:59 (13600): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 03:22:10 (13600): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 03:22:11 (13600): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 03:22:11 (13600): Guest Log: 2.6.3.0 1542 0 30080 142946 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 03:22:11 (13600): Guest Log: copied the webapp to /var/www
2025-02-23 03:22:11 (13600): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-23 03:22:11 (13600): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-23 03:22:12 (13600): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 03:22:12 (13600): Guest Log:  *** Starting ATLAS job. (PandaID=6522973509 taskID=43205094) ***
2025-02-23 05:00:54 (13600): Status Report: Elapsed Time: '6000.991489'
2025-02-23 05:00:54 (13600): Status Report: CPU Time: '9138.437500'
2025-02-23 06:41:27 (13600): Status Report: Elapsed Time: '12001.454531'
2025-02-23 06:41:27 (13600): Status Report: CPU Time: '21154.890625'
2025-02-23 08:22:17 (13600): Status Report: Elapsed Time: '18001.688677'
2025-02-23 08:22:17 (13600): Status Report: CPU Time: '33155.640625'
2025-02-23 10:03:19 (13600): Status Report: Elapsed Time: '24002.473051'
2025-02-23 10:03:19 (13600): Status Report: CPU Time: '45180.484375'
2025-02-23 11:44:13 (13600): Status Report: Elapsed Time: '30003.371387'
2025-02-23 11:44:13 (13600): Status Report: CPU Time: '57199.531250'
2025-02-23 13:25:16 (13600): Status Report: Elapsed Time: '36004.073685'
2025-02-23 13:25:16 (13600): Status Report: CPU Time: '69221.109375'
2025-02-23 15:06:42 (13600): Status Report: Elapsed Time: '42004.465816'
2025-02-23 15:06:42 (13600): Status Report: CPU Time: '81291.828125'
2025-02-23 16:47:42 (13600): Status Report: Elapsed Time: '48004.547588'
2025-02-23 16:47:42 (13600): Status Report: CPU Time: '93290.828125'
2025-02-23 18:22:24 (13600): Guest Log:  *** Job finished ***
2025-02-23 18:22:24 (13600): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:41,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:42,422 | INFO     | [data] copytool_out thread has finished
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:45,711 | INFO     | [data] queue_monitor thread has finished
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:47,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139997956216640)>', '<ExcThread(monitor, started 139997009147648)>']
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:47,411 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:47,412 | INFO     | [monitor] control thread has ended
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,094 | INFO     | all workflow threads have been joined
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,094 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,095 | INFO     | traces error code: 0
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,208 [wrapper] ==== pilot stdout END ====
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,212 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,216 [wrapper] pilotpid: 5852
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,220 [wrapper] Pilot exit status: 0
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,671 [wrapper] pandaids: 6522973509
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,695 [wrapper] cleanup supervisor_pilot 10783 5853
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,699 [wrapper] Test setup, not cleaning
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,707 [wrapper] apfmon messages muted
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,711 [wrapper] ==== wrapper stdout END ====
2025-02-23 18:22:24 (13600): Guest Log: 2025-02-23 07:21:52,714 [wrapper] ==== wrapper stderr END ====
2025-02-23 18:22:24 (13600): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 18:22:24 (13600): Guest Log:     "exeErrorCode": 0,
2025-02-23 18:22:24 (13600): Guest Log:     "exeErrorDiag": "",
2025-02-23 18:22:24 (13600): Guest Log:     "pilotErrorCode": 0,
2025-02-23 18:22:24 (13600): Guest Log:     "pilotErrorDiag": "",
2025-02-23 18:22:24 (13600): Guest Log:  *** Listing of results directory ***
2025-02-23 18:22:24 (13600): Guest Log: total 343960
2025-02-23 18:22:24 (13600): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 22 11:36 pilot3.tar.gz
2025-02-23 18:22:24 (13600): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 22 11:49 queuedata.json
2025-02-23 18:22:24 (13600): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 22 11:49 runpilot2-wrapper.sh
2025-02-23 18:22:24 (13600): Guest Log: -rwxr-xr-x. 1 atlas atlas      9002 Feb 22 16:21 init_data.xml
2025-02-23 18:22:24 (13600): Guest Log: -rwxr-xr-x. 1 atlas atlas    503560 Feb 22 16:21 input.tar.gz
2025-02-23 18:22:24 (13600): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 22 16:21 start_atlas.sh
2025-02-23 18:22:24 (13600): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 22 16:21 EVNT.43092757._001821.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 18:22:24 (13600): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Feb 22 16:21 pandaJob.out
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas       424 Feb 22 16:21 setup.sh.local
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas    987736 Feb 22 16:23 agis_schedconf.cvmfs.json
2025-02-23 18:22:24 (13600): Guest Log: drwx------. 4 atlas atlas      4096 Feb 22 16:24 pilot3
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas 331858114 Feb 23 07:20 HITS.43205094._036128.pool.root.1
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas      1020 Feb 23 07:20 memory_monitor_summary.json
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 23 07:21 agis_ddmendpoints.agis.ALL.json
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas    785711 Feb 23 07:21 log.43205094._036128.job.log.tgz.1
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas        95 Feb 23 07:21 pilot_heartbeat.json
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas      7709 Feb 23 07:21 heartbeat.json
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 23 07:21 pilotlog.txt
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas   7524267 Feb 23 07:21 log.43205094._036128.job.log.1
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas       357 Feb 23 07:21 output.list
2025-02-23 18:22:24 (13600): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 23 07:21 runtime_log
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas   8325120 Feb 23 07:21 result.tar.gz
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas       669 Feb 23 07:21 XtVNDm5B356nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmxwtKDmBOlWXm.diag
2025-02-23 18:22:24 (13600): Guest Log: -rw-r--r--. 1 atlas atlas     10966 Feb 23 07:21 runtime_log.err
2025-02-23 18:22:24 (13600): Guest Log: Looking for outputfile HITS.43205094._036128.pool.root.1
2025-02-23 18:22:24 (13600): Guest Log: HITS file was successfully produced
2025-02-23 18:22:24 (13600): Guest Log: -rw-------. 1 atlas atlas 331858114 Feb 23 07:20 /home/atlas/RunAtlas/HITS.43205094._036128.pool.root.1
2025-02-23 18:22:26 (13600): Guest Log: Successfully finished the ATLAS job!
2025-02-23 18:22:26 (13600): Guest Log: Copying the results back to the shared directory!
2025-02-23 18:22:26 (13600): Guest Log:  *** Contents of shared directory: ***
2025-02-23 18:22:26 (13600): Guest Log: total 666620
2025-02-23 18:22:26 (13600): Guest Log: -rwxrwxrwx. 1 root root 341892608 Feb 22 16:19 ATLAS.root_0
2025-02-23 18:22:26 (13600): Guest Log: -rwxrwxrwx. 1 root root 331858114 Feb 23  2025 HITS.pool.root.1
2025-02-23 18:22:26 (13600): Guest Log: -rwxrwxrwx. 1 root root      9002 Feb 22 16:19 init_data.xml
2025-02-23 18:22:26 (13600): Guest Log: -rwxrwxrwx. 1 root root    503560 Feb 22 16:18 input.tar.gz
2025-02-23 18:22:26 (13600): Guest Log: -rwxrwxrwx. 1 root root   8325120 Feb 23  2025 result.tar.gz
2025-02-23 18:22:26 (13600): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 22 16:18 start_atlas.sh
2025-02-23 18:22:26 (13600): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 18:22:26 (13600): VM Completion File Detected.
2025-02-23 18:22:26 (13600): Powering off VM.
2025-02-23 18:22:27 (13600): Successfully stopped VM.
2025-02-23 18:22:27 (13600): Deregistering VM. (boinc_2304ba698989ef75, slot#0)
2025-02-23 18:22:27 (13600): Removing network bandwidth throttle group from VM.
2025-02-23 18:22:28 (13600): Removing VM from VirtualBox.
18:22:33 (13600): called boinc_finish(0)

</stderr_txt>
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