Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:17:34 (26921): wrapper (7.7.26015): starting
09:17:34 (26921): wrapper: running run_atlas (--nthreads 8)
[2025-02-22 09:17:34] Arguments: --nthreads 8
[2025-02-22 09:17:34] Threads: 8
[2025-02-22 09:17:34] Checking for CVMFS
[2025-02-22 09:17:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-22 09:17:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-22 09:17:34] Running cvmfs_config stat atlas.cern.ch
[2025-02-22 09:17:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-22 09:17:34] 2.11.2.0 2827 76154 103184 142942 1 55 16477347 20275201 1 130560 0 18212587 99.930 7433562 30673 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-22 09:17:34] CVMFS is ok
[2025-02-22 09:17:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 09:17:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 09:17:34] Further information can be found at the LHC@home message board.
[2025-02-22 09:17:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 09:17:34] Checking for apptainer binary...
[2025-02-22 09:17:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-22 09:17:34] Running /usr/bin/apptainer --version
[2025-02-22 09:17:34] apptainer version 1.3.2-1.el7
[2025-02-22 09:17:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 09:17:36] c-204-5.aglt2.org
[2025-02-22 09:17:36] apptainer works
[2025-02-22 09:17:36] Set ATHENA_PROC_NUMBER=8
[2025-02-22 09:17:36] Set ATHENA_CORE_NUMBER=8
[2025-02-22 09:17:36] Starting ATLAS job with PandaID=6522547392
[2025-02-22 09:17:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 13:59:14]  *** The last 200 lines of the pilot log: ***
[2025-02-22 13:59:14] 2025-02-22 18:58:54,355 | INFO     | mean x: 1740242441.0
[2025-02-22 13:59:14] 2025-02-22 18:58:54,355 | INFO     | mean y: 2561372.2029520296
[2025-02-22 13:59:14] 2025-02-22 18:58:54,355 | INFO     | -- intersect: -12192052470.858435
[2025-02-22 13:59:14] 2025-02-22 18:58:54,355 | INFO     | intersect: -12192052470.858435
[2025-02-22 13:59:14] 2025-02-22 18:58:54,356 | INFO     | chi2: 2.2212508741925543
[2025-02-22 13:59:14] 2025-02-22 18:58:54,356 | INFO     | current chi2=2.2212508741925543 (change=55.21868318952748 %)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,356 | INFO     | model: linear, x: [1740234511.0, 1740234572.0, 1740234633.0, 1740234694.0, 1740234755.0, 1740234816.0, 1740234877.0, 1740234938.0, 1740234999.0, 1740235060.0, 1740
[2025-02-22 13:59:14] 2025-02-22 18:58:54,356 | INFO     | sum of square deviations: 5836025702.5
[2025-02-22 13:59:14] 2025-02-22 18:58:54,358 | INFO     | sum of deviations: -10417815002.5
[2025-02-22 13:59:14] 2025-02-22 18:58:54,358 | INFO     | mean x: 1740242593.5
[2025-02-22 13:59:14] 2025-02-22 18:58:54,359 | INFO     | mean y: 2585777.9962406014
[2025-02-22 13:59:14] 2025-02-22 18:58:54,359 | INFO     | -- intersect: 3109070622.7746997
[2025-02-22 13:59:14] 2025-02-22 18:58:54,359 | INFO     | intersect: 3109070622.7746997
[2025-02-22 13:59:14] 2025-02-22 18:58:54,359 | INFO     | chi2: 0.8384084375452884
[2025-02-22 13:59:14] 2025-02-22 18:58:54,360 | INFO     | current chi2=0.8384084375452884 (change=62.255121774569574 %)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,360 | INFO     | model: linear, x: [1740234816.0, 1740234877.0, 1740234938.0, 1740234999.0, 1740235060.0, 1740235121.0, 1740235182.0, 1740235243.0, 1740235304.0, 1740235365.0, 1740
[2025-02-22 13:59:14] 2025-02-22 18:58:54,360 | INFO     | sum of square deviations: 5513070810.0
[2025-02-22 13:59:14] 2025-02-22 18:58:54,362 | INFO     | sum of deviations: -41072360790.0
[2025-02-22 13:59:14] 2025-02-22 18:58:54,363 | INFO     | mean x: 1740242746.0
[2025-02-22 13:59:14] 2025-02-22 18:58:54,363 | INFO     | mean y: 2600162.1187739465
[2025-02-22 13:59:14] 2025-02-22 18:58:54,363 | INFO     | -- intersect: 12967403334.289953
[2025-02-22 13:59:14] 2025-02-22 18:58:54,363 | INFO     | intersect: 12967403334.289953
[2025-02-22 13:59:14] 2025-02-22 18:58:54,364 | INFO     | chi2: 0.19850175477131626
[2025-02-22 13:59:14] 2025-02-22 18:58:54,364 | INFO     | current chi2=0.19850175477131626 (change=76.32397935396568 %)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,364 | INFO     | model: linear, x: [1740235121.0, 1740235182.0, 1740235243.0, 1740235304.0, 1740235365.0, 1740235426.0, 1740235487.0, 1740235548.0, 1740235609.0, 1740235670.0, 1740
[2025-02-22 13:59:14] 2025-02-22 18:58:54,365 | INFO     | sum of square deviations: 5202255680.0
[2025-02-22 13:59:14] 2025-02-22 18:58:54,367 | INFO     | sum of deviations: -43333488873.5
[2025-02-22 13:59:14] 2025-02-22 18:58:54,367 | INFO     | mean x: 1740242898.5
[2025-02-22 13:59:14] 2025-02-22 18:58:54,368 | INFO     | mean y: 2601243.96484375
[2025-02-22 13:59:14] 2025-02-22 18:58:54,368 | INFO     | -- intersect: 14498389401.639006
[2025-02-22 13:59:14] 2025-02-22 18:58:54,368 | INFO     | intersect: 14498389401.639006
[2025-02-22 13:59:14] 2025-02-22 18:58:54,368 | INFO     | chi2: 0.17219295134594334
[2025-02-22 13:59:14] 2025-02-22 18:58:54,369 | INFO     | current chi2=0.17219295134594334 (change=13.253688087383383 %)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,369 | INFO     | left removable region: 40
[2025-02-22 13:59:14] 2025-02-22 18:58:54,369 | INFO     | model: linear, x: [1740236341.0, 1740236402.0, 1740236463.0, 1740236524.0, 1740236585.0, 1740236646.0, 1740236707.0, 1740236768.0, 1740236829.0, 1740236890.0, 1740
[2025-02-22 13:59:14] 2025-02-22 18:58:54,369 | INFO     | sum of square deviations: 3772712597.5
[2025-02-22 13:59:14] 2025-02-22 18:58:54,372 | INFO     | sum of deviations: -10669246175.0
[2025-02-22 13:59:14] 2025-02-22 18:58:54,372 | INFO     | mean x: 1740243325.5
[2025-02-22 13:59:14] 2025-02-22 18:58:54,372 | INFO     | mean y: 2583301.6695652176
[2025-02-22 13:59:14] 2025-02-22 18:58:54,372 | INFO     | -- intersect: 4923998321.849924
[2025-02-22 13:59:14] 2025-02-22 18:58:54,372 | INFO     | intersect: 4923998321.849924
[2025-02-22 13:59:14] 2025-02-22 18:58:54,373 | INFO     | chi2: 0.08192725349182728
[2025-02-22 13:59:14] 2025-02-22 18:58:54,373 | INFO     | -- intersect: 4923998321.849924
[2025-02-22 13:59:14] 2025-02-22 18:58:54,373 | INFO     | current memory leak: -2.83 B/s (using 230 data points, chi2=0.08)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,374 | INFO     | ..............................
[2025-02-22 13:59:14] 2025-02-22 18:58:54,374 | INFO     | . Timing measurements:
[2025-02-22 13:59:14] 2025-02-22 18:58:54,374 | INFO     | . get job = 0 s
[2025-02-22 13:59:14] 2025-02-22 18:58:54,374 | INFO     | . initial setup = 2 s
[2025-02-22 13:59:14] 2025-02-22 18:58:54,374 | INFO     | . payload setup = 8 s
[2025-02-22 13:59:14] 2025-02-22 18:58:54,375 | INFO     | . stage-in = 0 s
[2025-02-22 13:59:14] 2025-02-22 18:58:54,375 | INFO     | . payload execution = 16824 s
[2025-02-22 13:59:14] 2025-02-22 18:58:54,375 | INFO     | . stage-out = 2 s
[2025-02-22 13:59:14] 2025-02-22 18:58:54,375 | INFO     | . log creation = 0 s
[2025-02-22 13:59:14] 2025-02-22 18:58:54,375 | INFO     | ..............................
[2025-02-22 13:59:14] 2025-02-22 18:58:54,415 | WARNING  | process 4829 can no longer be monitored (due to stat problems) - aborting
[2025-02-22 13:59:14] 2025-02-22 18:58:54,420 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6522547392/memory_monitor_summary.json (trf name=prmon)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,426 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6522547392/memory_monitor_summary.json (trf name=prmon)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,444 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3782440 B
[2025-02-22 13:59:14] 2025-02-22 18:58:54,459 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16743 B
[2025-02-22 13:59:14] 2025-02-22 18:58:54,470 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-22 13:59:14] 2025-02-22 18:58:54,509 | INFO     | sufficient remaining disk space (18253611008 B)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,510 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,511 | INFO     | 
[2025-02-22 13:59:14] 2025-02-22 18:58:54,511 | INFO     | job summary report
[2025-02-22 13:59:14] 2025-02-22 18:58:54,511 | INFO     | --------------------------------------------------
[2025-02-22 13:59:14] 2025-02-22 18:58:54,511 | INFO     | PanDA job id: 6522547392
[2025-02-22 13:59:14] 2025-02-22 18:58:54,512 | INFO     | task id: 43078919
[2025-02-22 13:59:14] 2025-02-22 18:58:54,512 | INFO     | errors: (none)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,512 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 13:59:14] 2025-02-22 18:58:54,512 | INFO     | pilot state: finished 
[2025-02-22 13:59:14] 2025-02-22 18:58:54,513 | INFO     | transexitcode: 0
[2025-02-22 13:59:14] 2025-02-22 18:58:54,513 | INFO     | exeerrorcode: 0
[2025-02-22 13:59:14] 2025-02-22 18:58:54,513 | INFO     | exeerrordiag: 
[2025-02-22 13:59:14] 2025-02-22 18:58:54,513 | INFO     | exitcode: 0
[2025-02-22 13:59:14] 2025-02-22 18:58:54,514 | INFO     | exitmsg: OK
[2025-02-22 13:59:14] 2025-02-22 18:58:54,514 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6522547392: 4163412 B (within 2537553920 B limit)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,514 | INFO     | cpuconsumptiontime: 124045 s
[2025-02-22 13:59:14] 2025-02-22 18:58:54,514 | INFO     | nevents: 400
[2025-02-22 13:59:14] 2025-02-22 18:58:54,515 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6522547392/HITS.43078919._085931.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,515 | INFO     | neventsw: 0
[2025-02-22 13:59:14] 2025-02-22 18:58:54,515 | INFO     | total size of present files: 0 B (workdir size: 4163412 B)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,515 | INFO     | pid: 4829
[2025-02-22 13:59:14] 2025-02-22 18:58:54,516 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6522547392/HITS.43078919._085931.pool.root.1 since it does not exist
[2025-02-22 13:59:14] 2025-02-22 18:58:54,516 | INFO     | pgrp: 4829
[2025-02-22 13:59:14] 2025-02-22 18:58:54,520 | INFO     | corecount: 8
[2025-02-22 13:59:14] 2025-02-22 18:58:54,521 | INFO     | event service: False
[2025-02-22 13:59:14] 2025-02-22 18:58:54,521 | INFO     | sizes: {0: 2383311, 6: 2383517, 11: 2383545, 16836: 2414950, 16839: 2423947, 16848: 2424061}
[2025-02-22 13:59:14] 2025-02-22 18:58:54,521 | INFO     | --------------------------------------------------
[2025-02-22 13:59:14] 2025-02-22 18:58:54,521 | INFO     | 
[2025-02-22 13:59:14] 2025-02-22 18:58:54,521 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-22 13:59:14] 2025-02-22 18:58:54,552 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,553 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,553 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,553 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,553 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,553 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,553 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,554 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,554 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,554 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,554 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,555 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,556 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 13:59:14] 2025-02-22 18:58:54,556 | INFO     | job 6522547392 has completed (purged errors)
[2025-02-22 13:59:14] 2025-02-22 18:58:54,556 | INFO     | overall cleanup function is called
[2025-02-22 13:59:14] 2025-02-22 18:58:54,586 | INFO     | number of running child processes to parent process 4829: 1
[2025-02-22 13:59:14] 2025-02-22 18:58:54,587 | INFO     | maximum number of monitored processes: 6
[2025-02-22 13:59:14] 2025-02-22 18:58:54,587 | INFO     | aborting job monitoring since job object (job id=6522547392) has expired
[2025-02-22 13:59:14] 2025-02-22 18:58:55,565 | INFO     | --- collectZombieJob: --- 10, [4829]
[2025-02-22 13:59:14] 2025-02-22 18:58:55,565 | INFO     | zombie collector waiting for pid 4829
[2025-02-22 13:59:14] 2025-02-22 18:58:55,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 13:59:14] 2025-02-22 18:58:55,565 | INFO     | collected zombie processes
[2025-02-22 13:59:14] 2025-02-22 18:58:55,566 | INFO     | will attempt to kill all subprocesses of pid=4829
[2025-02-22 13:59:14] 2025-02-22 18:58:55,635 | INFO     | process IDs to be killed: [4829] (in reverse order)
[2025-02-22 13:59:14] 2025-02-22 18:58:55,690 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 13:59:14] 2025-02-22 18:58:55,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 13:59:14] 2025-02-22 18:58:55,695 | INFO     | did not find any defunct processes belonging to 4829
[2025-02-22 13:59:14] 2025-02-22 18:58:55,699 | INFO     | did not find any defunct processes belonging to 4829
[2025-02-22 13:59:14] 2025-02-22 18:58:55,700 | INFO     | ready for new job
[2025-02-22 13:59:14] 2025-02-22 18:58:55,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 13:59:14] 2025-02-22 18:58:55,702 | INFO     | **************************************
[2025-02-22 13:59:14] 2025-02-22 18:58:55,702 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 13:59:14] 2025-02-22 18:58:55,702 | INFO     | **************************************
[2025-02-22 13:59:14] 2025-02-22 18:58:55,702 | INFO     | 
[2025-02-22 13:59:14] 2025-02-22 18:58:55,703 | INFO     | architecture information:
[2025-02-22 13:59:14] 2025-02-22 18:58:55,704 | INFO     | executing command: cat /etc/os-release
[2025-02-22 13:59:14] 2025-02-22 18:58:55,721 | INFO     | cat /etc/os-release:
[2025-02-22 13:59:14] NAME="CentOS Linux"
[2025-02-22 13:59:14] VERSION="7 (Core)"
[2025-02-22 13:59:14] ID="centos"
[2025-02-22 13:59:14] ID_LIKE="rhel fedora"
[2025-02-22 13:59:14] VERSION_ID="7"
[2025-02-22 13:59:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 13:59:14] ANSI_COLOR="0;31"
[2025-02-22 13:59:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 13:59:14] HOME_URL="https://www.centos.org/"
[2025-02-22 13:59:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 13:59:14] 
[2025-02-22 13:59:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 13:59:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 13:59:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 13:59:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 13:59:14] 
[2025-02-22 13:59:14] 2025-02-22 18:58:55,722 | INFO     | **************************************
[2025-02-22 13:59:14] 2025-02-22 18:58:56,225 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-22 13:59:14] 2025-02-22 18:58:56,246 | INFO     | sufficient remaining disk space (18258853888 B)
[2025-02-22 13:59:14] 2025-02-22 18:58:56,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 13:59:14] 2025-02-22 18:58:56,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 13:59:14] 2025-02-22 18:58:56,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 13:59:14] 2025-02-22 18:58:56,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 13:59:14] 2025-02-22 18:58:56,248 | INFO     | aborting loop
[2025-02-22 13:59:14] 2025-02-22 18:58:56,248 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 13:59:14] 2025-02-22 18:58:56,481 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 13:59:14] 2025-02-22 18:58:56,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 13:59:14] 2025-02-22 18:58:56,482 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 13:59:14] 2025-02-22 18:58:56,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 13:59:14] 2025-02-22 18:58:56,686 | INFO     | all data control threads have been joined
[2025-02-22 13:59:14] 2025-02-22 18:58:56,702 | INFO     | all payload control threads have been joined
[2025-02-22 13:59:14] 2025-02-22 18:58:57,252 | INFO     | [job] retrieve thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:57,254 | INFO     | [job] queue monitor thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:57,254 | INFO     | [job] job monitor thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:57,397 | INFO     | all job control threads have been joined
[2025-02-22 13:59:14] 2025-02-22 18:58:57,439 | INFO     | [data] copytool_in thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:57,443 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:57,686 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:57,692 | INFO     | [data] control thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:57,703 | INFO     | [payload] control thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:57,880 | INFO     | [payload] failed_post thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:57,947 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:58,254 | INFO     | [data] copytool_out thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:58,376 | INFO     | [job] validate thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:58,402 | INFO     | [job] control thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:58:58,756 | INFO     | [payload] validate_post thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:59:00,658 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:59:06,696 | INFO     | job.realtimelogging is not enabled
[2025-02-22 13:59:14] 2025-02-22 18:59:07,702 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 13:59:14] 2025-02-22 18:59:09,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139704206370624)>', '<ExcThread(monitor, started 139703391082240)>']
[2025-02-22 13:59:14] 2025-02-22 18:59:09,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 13:59:14] 2025-02-22 18:59:09,544 | INFO     | [monitor] control thread has ended
[2025-02-22 13:59:14] 2025-02-22 18:59:14,373 | INFO     | all workflow threads have been joined
[2025-02-22 13:59:14] 2025-02-22 18:59:14,373 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 13:59:14] 2025-02-22 18:59:14,374 | INFO     | traces error code: 0
[2025-02-22 13:59:14] 2025-02-22 18:59:14,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 13:59:14] 2025-02-22 18:59:14,487 [wrapper] ==== pilot stdout END ====
[2025-02-22 13:59:14] 2025-02-22 18:59:14,492 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 13:59:14] 2025-02-22 18:59:14,496 [wrapper] pilotpid: 30596
[2025-02-22 13:59:14] 2025-02-22 18:59:14,500 [wrapper] Pilot exit status: 0
[2025-02-22 13:59:14] 2025-02-22 18:59:14,517 [wrapper] pandaids: 6522547392
[2025-02-22 13:59:14] 2025-02-22 18:59:14,559 [wrapper] cleanup supervisor_pilot 21293 30597
[2025-02-22 13:59:14] 2025-02-22 18:59:14,564 [wrapper] Test setup, not cleaning
[2025-02-22 13:59:14] 2025-02-22 18:59:14,574 [wrapper] apfmon messages muted
[2025-02-22 13:59:14] 2025-02-22 18:59:14,578 [wrapper] ==== wrapper stdout END ====
[2025-02-22 13:59:14] 2025-02-22 18:59:14,582 [wrapper] ==== wrapper stderr END ====
[2025-02-22 13:59:14]  *** Error codes and diagnostics ***
[2025-02-22 13:59:14]     "exeErrorCode": 0,
[2025-02-22 13:59:14]     "exeErrorDiag": "",
[2025-02-22 13:59:14]     "pilotErrorCode": 0,
[2025-02-22 13:59:14]     "pilotErrorDiag": "",
[2025-02-22 13:59:14]  *** Listing of results directory ***
[2025-02-22 13:59:14] total 665024
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas    491065 Feb 21 18:14 pilot3.tar.gz
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas      5118 Feb 21 18:33 queuedata.json
[2025-02-22 13:59:14] -rwx------ 1 boincer umatlas     35865 Feb 21 18:36 runpilot2-wrapper.sh
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas       100 Feb 22 09:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 13:59:14] -rwxr-xr-x 1 boincer umatlas      7986 Feb 22 09:17 run_atlas
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas       105 Feb 22 09:17 job.xml
[2025-02-22 13:59:14] -rw-r--r-- 2 boincer umatlas 343625815 Feb 22 09:17 EVNT.43078917._002602.pool.root.1
[2025-02-22 13:59:14] -rw-r--r-- 2 boincer umatlas     17569 Feb 22 09:17 start_atlas.sh
[2025-02-22 13:59:14] drwxrwx--x 2 boincer umatlas      4096 Feb 22 09:17 shared
[2025-02-22 13:59:14] -rw-r--r-- 2 boincer umatlas    503559 Feb 22 09:17 input.tar.gz
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas         0 Feb 22 09:17 boinc_lockfile
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas      2546 Feb 22 09:17 pandaJob.out
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas       424 Feb 22 09:17 setup.sh.local
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas    988072 Feb 22 09:17 agis_schedconf.cvmfs.json
[2025-02-22 13:59:14] drwx------ 4 boincer umatlas      4096 Feb 22 09:17 pilot3
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas      5826 Feb 22 13:57 init_data.xml
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas 329247757 Feb 22 13:57 HITS.43078919._085931.pool.root.1
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas       533 Feb 22 13:57 boinc_task_state.xml
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas      1050 Feb 22 13:58 memory_monitor_summary.json
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas   1582569 Feb 22 13:58 agis_ddmendpoints.agis.ALL.json
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas    452106 Feb 22 13:58 log.43078919._085931.job.log.tgz.1
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas        95 Feb 22 13:58 pilot_heartbeat.json
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas      7766 Feb 22 13:58 heartbeat.json
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas        29 Feb 22 13:59 wrapper_checkpoint.txt
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas      8192 Feb 22 13:59 boinc_mmap_file
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas      4287 Feb 22 13:59 pilotlog.txt
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas   1703126 Feb 22 13:59 log.43078919._085931.job.log.1
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas       357 Feb 22 13:59 output.list
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas       620 Feb 22 13:59 runtime_log
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas   2170880 Feb 22 13:59 result.tar.gz
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas     11009 Feb 22 13:59 runtime_log.err
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas       662 Feb 22 13:59 Ac5MDm7jr56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmY9sKDmdBV0Fo.diag
[2025-02-22 13:59:14] -rw-r--r-- 1 boincer umatlas     21941 Feb 22 13:59 stderr.txt
[2025-02-22 13:59:14] HITS file was successfully produced:
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas 329247757 Feb 22 13:57 shared/HITS.pool.root.1
[2025-02-22 13:59:14]  *** Contents of shared directory: ***
[2025-02-22 13:59:14] total 659744
[2025-02-22 13:59:14] -rw-r--r-- 2 boincer umatlas 343625815 Feb 22 09:17 ATLAS.root_0
[2025-02-22 13:59:14] -rw-r--r-- 2 boincer umatlas     17569 Feb 22 09:17 start_atlas.sh
[2025-02-22 13:59:14] -rw-r--r-- 2 boincer umatlas    503559 Feb 22 09:17 input.tar.gz
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas 329247757 Feb 22 13:57 HITS.pool.root.1
[2025-02-22 13:59:14] -rw------- 1 boincer umatlas   2170880 Feb 22 13:59 result.tar.gz
13:59:16 (26921): run_atlas exited; CPU time 123764.394624
13:59:16 (26921): called boinc_finish(0)

</stderr_txt>
]]>

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