Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:12:48 (29197): wrapper (7.7.26015): starting
09:12:48 (29197): wrapper: running run_atlas (--nthreads 12)
[2025-02-22 09:12:48] Arguments: --nthreads 12
[2025-02-22 09:12:48] Threads: 12
[2025-02-22 09:12:48] Checking for CVMFS
[2025-02-22 09:12:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-22 09:12:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-22 09:12:49] Running cvmfs_config stat atlas.cern.ch
[2025-02-22 09:12:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-22 09:12:49] 2.11.2.0 22679 290644 155220 142941 0 58 16980933 20275201 1 130560 0 21087962 99.985 6895587 40352 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-22 09:12:49] CVMFS is ok
[2025-02-22 09:12:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 09:12:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 09:12:49] Further information can be found at the LHC@home message board.
[2025-02-22 09:12:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 09:12:49] Checking for apptainer binary...
[2025-02-22 09:12:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-22 09:12:49] Running /usr/bin/apptainer --version
[2025-02-22 09:12:49] apptainer version 1.3.2-1.el7
[2025-02-22 09:12:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 09:12:50] c-205-11.aglt2.org
[2025-02-22 09:12:50] apptainer works
[2025-02-22 09:12:50] Set ATHENA_PROC_NUMBER=12
[2025-02-22 09:12:50] Set ATHENA_CORE_NUMBER=12
[2025-02-22 09:12:50] Starting ATLAS job with PandaID=6522671452
[2025-02-22 09:12:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:31:14 (24292): wrapper (7.7.26015): starting
10:31:14 (24292): wrapper: running run_atlas (--nthreads 12)
[2025-02-22 10:31:14] Arguments: --nthreads 12
[2025-02-22 10:31:14] Threads: 12
[2025-02-22 10:31:14] This job has been restarted, cleaning up previous attempt
[2025-02-22 10:31:14] Checking for CVMFS
[2025-02-22 10:31:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-22 10:31:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-22 10:31:15] Running cvmfs_config stat atlas.cern.ch
[2025-02-22 10:31:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-22 10:31:15] 2.11.2.0 22679 290722 154936 142944 2 15 16990004 20275201 1 130560 0 21176471 99.985 6899177 40353 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-22 10:31:15] CVMFS is ok
[2025-02-22 10:31:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 10:31:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 10:31:15] Further information can be found at the LHC@home message board.
[2025-02-22 10:31:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 10:31:15] Checking for apptainer binary...
[2025-02-22 10:31:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-22 10:31:15] Running /usr/bin/apptainer --version
[2025-02-22 10:31:15] apptainer version 1.3.2-1.el7
[2025-02-22 10:31:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 10:31:16] c-205-11.aglt2.org
[2025-02-22 10:31:16] apptainer works
[2025-02-22 10:31:16] Set ATHENA_PROC_NUMBER=12
[2025-02-22 10:31:16] Set ATHENA_CORE_NUMBER=12
[2025-02-22 10:31:16] Starting ATLAS job with PandaID=6522671452
[2025-02-22 10:31:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 13:13:45]  *** The last 200 lines of the pilot log: ***
[2025-02-22 13:13:45] 2025-02-22 18:13:25,564 | INFO     | model: linear, x: [1740238624.0, 1740238685.0, 1740238746.0, 1740238807.0, 1740238868.0, 1740238929.0, 1740238990.0, 1740239051.0, 1740239112.0, 1740239173.0, 1740
[2025-02-22 13:13:45] 2025-02-22 18:13:25,564 | INFO     | sum of square deviations: 1132458442.5
[2025-02-22 13:13:45] 2025-02-22 18:13:25,564 | INFO     | sum of deviations: 34762047979.0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,565 | INFO     | mean x: 1740243290.5
[2025-02-22 13:13:45] 2025-02-22 18:13:25,565 | INFO     | mean y: 2747869.74025974
[2025-02-22 13:13:45] 2025-02-22 18:13:25,565 | INFO     | -- intersect: -53415919420.113815
[2025-02-22 13:13:45] 2025-02-22 18:13:25,565 | INFO     | intersect: -53415919420.113815
[2025-02-22 13:13:45] 2025-02-22 18:13:25,565 | INFO     | chi2: 2.652874728205308
[2025-02-22 13:13:45] 2025-02-22 18:13:25,565 | INFO     | current chi2=2.652874728205308 (change=52.902763840416945 %)
[2025-02-22 13:13:45] 2025-02-22 18:13:25,566 | INFO     | model: linear, x: [1740238929.0, 1740238990.0, 1740239051.0, 1740239112.0, 1740239173.0, 1740239234.0, 1740239295.0, 1740239356.0, 1740239417.0, 1740239478.0, 1740
[2025-02-22 13:13:45] 2025-02-22 18:13:25,566 | INFO     | sum of square deviations: 1025693650.0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,566 | INFO     | sum of deviations: -111518736.000001
[2025-02-22 13:13:45] 2025-02-22 18:13:25,567 | INFO     | mean x: 1740243443.0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,567 | INFO     | mean y: 2797693.953020134
[2025-02-22 13:13:45] 2025-02-22 18:13:25,567 | INFO     | -- intersect: 192005991.2800532
[2025-02-22 13:13:45] 2025-02-22 18:13:25,567 | INFO     | intersect: 192005991.2800532
[2025-02-22 13:13:45] 2025-02-22 18:13:25,567 | INFO     | chi2: 1.0180584539217803
[2025-02-22 13:13:45] 2025-02-22 18:13:25,567 | INFO     | current chi2=1.0180584539217803 (change=61.624329897759424 %)
[2025-02-22 13:13:45] 2025-02-22 18:13:25,567 | INFO     | model: linear, x: [1740239234.0, 1740239295.0, 1740239356.0, 1740239417.0, 1740239478.0, 1740239539.0, 1740239600.0, 1740239661.0, 1740239722.0, 1740239783.0, 1740
[2025-02-22 13:13:45] 2025-02-22 18:13:25,568 | INFO     | sum of square deviations: 925859220.0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,568 | INFO     | sum of deviations: -21470855274.0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,568 | INFO     | mean x: 1740243595.5
[2025-02-22 13:13:45] 2025-02-22 18:13:25,569 | INFO     | mean y: 2830027.6944444445
[2025-02-22 13:13:45] 2025-02-22 18:13:25,569 | INFO     | -- intersect: 40359417264.01952
[2025-02-22 13:13:45] 2025-02-22 18:13:25,569 | INFO     | intersect: 40359417264.01952
[2025-02-22 13:13:45] 2025-02-22 18:13:25,569 | INFO     | chi2: 0.21250755022262174
[2025-02-22 13:13:45] 2025-02-22 18:13:25,569 | INFO     | current chi2=0.21250755022262174 (change=79.12619364791905 %)
[2025-02-22 13:13:45] 2025-02-22 18:13:25,569 | INFO     | model: linear, x: [1740239539.0, 1740239600.0, 1740239661.0, 1740239722.0, 1740239783.0, 1740239844.0, 1740239905.0, 1740239966.0, 1740240027.0, 1740240088.0, 1740
[2025-02-22 13:13:45] 2025-02-22 18:13:25,570 | INFO     | sum of square deviations: 832722590.0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,570 | INFO     | sum of deviations: -25979800448.000004
[2025-02-22 13:13:45] 2025-02-22 18:13:25,570 | INFO     | mean x: 1740243748.0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,570 | INFO     | mean y: 2837260.4388489206
[2025-02-22 13:13:45] 2025-02-22 18:13:25,571 | INFO     | -- intersect: 54296050686.91693
[2025-02-22 13:13:45] 2025-02-22 18:13:25,571 | INFO     | intersect: 54296050686.91693
[2025-02-22 13:13:45] 2025-02-22 18:13:25,571 | INFO     | chi2: 0.1152906163947134
[2025-02-22 13:13:45] 2025-02-22 18:13:25,571 | INFO     | current chi2=0.1152906163947134 (change=45.74751990038209 %)
[2025-02-22 13:13:45] 2025-02-22 18:13:25,571 | INFO     | model: linear, x: [1740239844.0, 1740239905.0, 1740239966.0, 1740240027.0, 1740240088.0, 1740240149.0, 1740240210.0, 1740240271.0, 1740240332.0, 1740240393.0, 1740
[2025-02-22 13:13:45] 2025-02-22 18:13:25,571 | INFO     | sum of square deviations: 746051197.5
[2025-02-22 13:13:45] 2025-02-22 18:13:25,572 | INFO     | sum of deviations: -22340335060.99999
[2025-02-22 13:13:45] 2025-02-22 18:13:25,572 | INFO     | mean x: 1740243900.5
[2025-02-22 13:13:45] 2025-02-22 18:13:25,572 | INFO     | mean y: 2830838.0597014925
[2025-02-22 13:13:45] 2025-02-22 18:13:25,572 | INFO     | -- intersect: 52114042448.348045
[2025-02-22 13:13:45] 2025-02-22 18:13:25,572 | INFO     | intersect: 52114042448.348045
[2025-02-22 13:13:45] 2025-02-22 18:13:25,573 | INFO     | chi2: 0.11364304259517481
[2025-02-22 13:13:45] 2025-02-22 18:13:25,573 | INFO     | current chi2=0.11364304259517481 (change=1.4290614891830316 %)
[2025-02-22 13:13:45] 2025-02-22 18:13:25,573 | INFO     | left removable region: 50
[2025-02-22 13:13:45] 2025-02-22 18:13:25,573 | INFO     | model: linear, x: [1740241369.0, 1740241430.0, 1740241491.0, 1740241552.0, 1740241613.0, 1740241674.0, 1740241735.0, 1740241796.0, 1740241857.0, 1740241918.0, 1740
[2025-02-22 13:13:45] 2025-02-22 18:13:25,573 | INFO     | sum of square deviations: 338804492.0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,574 | INFO     | sum of deviations: 845299813.9999999
[2025-02-22 13:13:45] 2025-02-22 18:13:25,574 | INFO     | mean x: 1740244480.0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,574 | INFO     | mean y: 2777856.7475728155
[2025-02-22 13:13:45] 2025-02-22 18:13:25,574 | INFO     | -- intersect: -4339042780.207047
[2025-02-22 13:13:45] 2025-02-22 18:13:25,574 | INFO     | intersect: -4339042780.207047
[2025-02-22 13:13:45] 2025-02-22 18:13:25,574 | INFO     | chi2: 6.505755009151497e-05
[2025-02-22 13:13:45] 2025-02-22 18:13:25,575 | INFO     | -- intersect: -4339042780.207047
[2025-02-22 13:13:45] 2025-02-22 18:13:25,575 | INFO     | current memory leak: 2.49 B/s (using 103 data points, chi2=0.00)
[2025-02-22 13:13:45] 2025-02-22 18:13:25,575 | INFO     | ..............................
[2025-02-22 13:13:45] 2025-02-22 18:13:25,575 | INFO     | . Timing measurements:
[2025-02-22 13:13:45] 2025-02-22 18:13:25,575 | INFO     | . get job = 0 s
[2025-02-22 13:13:45] 2025-02-22 18:13:25,575 | INFO     | . initial setup = 1 s
[2025-02-22 13:13:45] 2025-02-22 18:13:25,575 | INFO     | . payload setup = 7 s
[2025-02-22 13:13:45] 2025-02-22 18:13:25,576 | INFO     | . stage-in = 0 s
[2025-02-22 13:13:45] 2025-02-22 18:13:25,576 | INFO     | . payload execution = 9681 s
[2025-02-22 13:13:45] 2025-02-22 18:13:25,576 | INFO     | . stage-out = 1 s
[2025-02-22 13:13:45] 2025-02-22 18:13:25,576 | INFO     | . log creation = 0 s
[2025-02-22 13:13:45] 2025-02-22 18:13:25,576 | INFO     | ..............................
[2025-02-22 13:13:45] 2025-02-22 18:13:25,657 | INFO     | 
[2025-02-22 13:13:45] 2025-02-22 18:13:25,657 | INFO     | job summary report
[2025-02-22 13:13:45] 2025-02-22 18:13:25,658 | INFO     | --------------------------------------------------
[2025-02-22 13:13:45] 2025-02-22 18:13:25,658 | INFO     | PanDA job id: 6522671452
[2025-02-22 13:13:45] 2025-02-22 18:13:25,658 | INFO     | task id: 43205094
[2025-02-22 13:13:45] 2025-02-22 18:13:25,658 | INFO     | errors: (none)
[2025-02-22 13:13:45] 2025-02-22 18:13:25,658 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 13:13:45] 2025-02-22 18:13:25,659 | INFO     | pilot state: finished 
[2025-02-22 13:13:45] 2025-02-22 18:13:25,659 | INFO     | transexitcode: 0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,659 | INFO     | exeerrorcode: 0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,659 | INFO     | exeerrordiag: 
[2025-02-22 13:13:45] 2025-02-22 18:13:25,659 | INFO     | exitcode: 0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,659 | INFO     | exitmsg: OK
[2025-02-22 13:13:45] 2025-02-22 18:13:25,660 | INFO     | cpuconsumptiontime: 101446 s
[2025-02-22 13:13:45] 2025-02-22 18:13:25,660 | INFO     | nevents: 400
[2025-02-22 13:13:45] 2025-02-22 18:13:25,660 | INFO     | neventsw: 0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,660 | INFO     | pid: 2336
[2025-02-22 13:13:45] 2025-02-22 18:13:25,660 | INFO     | pgrp: 2336
[2025-02-22 13:13:45] 2025-02-22 18:13:25,660 | INFO     | corecount: 12
[2025-02-22 13:13:45] 2025-02-22 18:13:25,661 | INFO     | event service: False
[2025-02-22 13:13:45] 2025-02-22 18:13:25,661 | INFO     | sizes: {0: 2383357, 1: 2383385, 5: 2383591, 11: 2383647, 9689: 2411777, 9691: 2420718, 9695: 2420902, 9700: 2421072}
[2025-02-22 13:13:45] 2025-02-22 18:13:25,661 | INFO     | --------------------------------------------------
[2025-02-22 13:13:45] 2025-02-22 18:13:25,661 | INFO     | 
[2025-02-22 13:13:45] 2025-02-22 18:13:25,661 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-22 13:13:45] 2025-02-22 18:13:25,687 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,687 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,687 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,687 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,688 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,688 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,688 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,688 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,689 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,689 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,689 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,689 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,689 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,689 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,690 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,690 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 13:13:45] 2025-02-22 18:13:25,690 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,690 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 13:13:45] 2025-02-22 18:13:25,690 | INFO     | job 6522671452 has completed (purged errors)
[2025-02-22 13:13:45] 2025-02-22 18:13:25,691 | INFO     | overall cleanup function is called
[2025-02-22 13:13:45] 2025-02-22 18:13:26,699 | INFO     | --- collectZombieJob: --- 10, [2336]
[2025-02-22 13:13:45] 2025-02-22 18:13:26,699 | INFO     | zombie collector waiting for pid 2336
[2025-02-22 13:13:45] 2025-02-22 18:13:26,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 13:13:45] 2025-02-22 18:13:26,699 | INFO     | collected zombie processes
[2025-02-22 13:13:45] 2025-02-22 18:13:26,700 | INFO     | will attempt to kill all subprocesses of pid=2336
[2025-02-22 13:13:45] 2025-02-22 18:13:26,763 | INFO     | process IDs to be killed: [2336] (in reverse order)
[2025-02-22 13:13:45] 2025-02-22 18:13:26,810 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 13:13:45] 2025-02-22 18:13:26,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 13:13:45] 2025-02-22 18:13:26,814 | INFO     | did not find any defunct processes belonging to 2336
[2025-02-22 13:13:45] 2025-02-22 18:13:26,817 | INFO     | did not find any defunct processes belonging to 2336
[2025-02-22 13:13:45] 2025-02-22 18:13:26,818 | INFO     | ready for new job
[2025-02-22 13:13:45] 2025-02-22 18:13:26,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 13:13:45] 2025-02-22 18:13:26,819 | INFO     | **************************************
[2025-02-22 13:13:45] 2025-02-22 18:13:26,819 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 13:13:45] 2025-02-22 18:13:26,819 | INFO     | **************************************
[2025-02-22 13:13:45] 2025-02-22 18:13:26,819 | INFO     | 
[2025-02-22 13:13:45] 2025-02-22 18:13:26,820 | INFO     | architecture information:
[2025-02-22 13:13:45] 2025-02-22 18:13:26,820 | INFO     | executing command: cat /etc/os-release
[2025-02-22 13:13:45] 2025-02-22 18:13:26,834 | INFO     | cat /etc/os-release:
[2025-02-22 13:13:45] NAME="CentOS Linux"
[2025-02-22 13:13:45] VERSION="7 (Core)"
[2025-02-22 13:13:45] ID="centos"
[2025-02-22 13:13:45] ID_LIKE="rhel fedora"
[2025-02-22 13:13:45] VERSION_ID="7"
[2025-02-22 13:13:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 13:13:45] ANSI_COLOR="0;31"
[2025-02-22 13:13:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 13:13:45] HOME_URL="https://www.centos.org/"
[2025-02-22 13:13:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 13:13:45] 
[2025-02-22 13:13:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 13:13:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 13:13:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 13:13:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 13:13:45] 
[2025-02-22 13:13:45] 2025-02-22 18:13:26,835 | INFO     | **************************************
[2025-02-22 13:13:45] 2025-02-22 18:13:27,338 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-22 13:13:45] 2025-02-22 18:13:27,354 | INFO     | sufficient remaining disk space (29038215168 B)
[2025-02-22 13:13:45] 2025-02-22 18:13:27,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 13:13:45] 2025-02-22 18:13:27,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 13:13:45] 2025-02-22 18:13:27,354 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 13:13:45] 2025-02-22 18:13:27,355 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 13:13:45] 2025-02-22 18:13:27,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 13:13:45] 2025-02-22 18:13:27,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 13:13:45] 2025-02-22 18:13:27,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 13:13:45] 2025-02-22 18:13:27,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 13:13:45] 2025-02-22 18:13:27,400 | INFO     | all data control threads have been joined
[2025-02-22 13:13:45] 2025-02-22 18:13:27,467 | INFO     | all payload control threads have been joined
[2025-02-22 13:13:45] 2025-02-22 18:13:27,586 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-22 13:13:45] 2025-02-22 18:13:27,586 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-22 13:13:45] 2025-02-22 18:13:27,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 13:13:45] 2025-02-22 18:13:27,586 | INFO     | will abort loop
[2025-02-22 13:13:45] 2025-02-22 18:13:27,691 | INFO     | all job control threads have been joined
[2025-02-22 13:13:45] 2025-02-22 18:13:27,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 13:13:45] 2025-02-22 18:13:28,360 | INFO     | [job] retrieve thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:28,362 | INFO     | [job] queue monitor thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:28,406 | INFO     | [data] control thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:28,472 | INFO     | [payload] control thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:28,588 | INFO     | [job] job monitor thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:28,696 | INFO     | [job] control thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:28,895 | INFO     | [data] copytool_in thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:29,004 | INFO     | [payload] validate_post thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:29,174 | INFO     | [job] validate thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:29,367 | INFO     | [payload] failed_post thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:29,643 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:29,809 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:29,810 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:29,854 | INFO     | [data] copytool_out thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:31,362 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:37,797 | INFO     | job.realtimelogging is not enabled
[2025-02-22 13:13:45] 2025-02-22 18:13:38,803 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 13:13:45] 2025-02-22 18:13:40,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707845392192)>', '<ExcThread(monitor, started 140707239008000)>']
[2025-02-22 13:13:45] 2025-02-22 18:13:41,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 13:13:45] 2025-02-22 18:13:41,424 | INFO     | [monitor] control thread has ended
[2025-02-22 13:13:45] 2025-02-22 18:13:45,598 | INFO     | all workflow threads have been joined
[2025-02-22 13:13:45] 2025-02-22 18:13:45,598 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 13:13:45] 2025-02-22 18:13:45,598 | INFO     | traces error code: 0
[2025-02-22 13:13:45] 2025-02-22 18:13:45,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 13:13:45] 2025-02-22 18:13:45,683 [wrapper] ==== pilot stdout END ====
[2025-02-22 13:13:45] 2025-02-22 18:13:45,687 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 13:13:45] 2025-02-22 18:13:45,690 [wrapper] pilotpid: 28304
[2025-02-22 13:13:45] 2025-02-22 18:13:45,694 [wrapper] Pilot exit status: 0
[2025-02-22 13:13:45] 2025-02-22 18:13:45,708 [wrapper] pandaids: 6522671452 6522671452
[2025-02-22 13:13:45] 2025-02-22 18:13:45,752 [wrapper] cleanup supervisor_pilot 19181 28305
[2025-02-22 13:13:45] 2025-02-22 18:13:45,756 [wrapper] Test setup, not cleaning
[2025-02-22 13:13:45] 2025-02-22 18:13:45,763 [wrapper] apfmon messages muted
[2025-02-22 13:13:45] 2025-02-22 18:13:45,767 [wrapper] ==== wrapper stdout END ====
[2025-02-22 13:13:45] 2025-02-22 18:13:45,771 [wrapper] ==== wrapper stderr END ====
[2025-02-22 13:13:45]  *** Error codes and diagnostics ***
[2025-02-22 13:13:45]     "exeErrorCode": 0,
[2025-02-22 13:13:45]     "exeErrorDiag": "",
[2025-02-22 13:13:45]     "pilotErrorCode": 0,
[2025-02-22 13:13:45]     "pilotErrorDiag": "",
[2025-02-22 13:13:45]  *** Listing of results directory ***
[2025-02-22 13:13:45] total 996820
[2025-02-22 13:13:45] drwx------ 4 boincer umatlas      4096 Dec 18 06:03 pilot3
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas    491065 Feb 21 22:34 pilot3.tar.gz
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas      5118 Feb 21 23:00 queuedata.json
[2025-02-22 13:13:45] -rwx------ 1 boincer umatlas     35865 Feb 21 23:00 runpilot2-wrapper.sh
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas       100 Feb 22 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 13:13:45] -rwxr-xr-x 1 boincer umatlas      7986 Feb 22 09:12 run_atlas
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas       105 Feb 22 09:12 job.xml
[2025-02-22 13:13:45] -rw-r--r-- 3 boincer umatlas 343545991 Feb 22 09:12 EVNT.43092757._002090.pool.root.1
[2025-02-22 13:13:45] -rw-r--r-- 3 boincer umatlas 343545991 Feb 22 09:12 ATLAS.root_0
[2025-02-22 13:13:45] -rw-r--r-- 2 boincer umatlas     17569 Feb 22 09:12 start_atlas.sh
[2025-02-22 13:13:45] drwxrwx--x 2 boincer umatlas      4096 Feb 22 09:12 shared
[2025-02-22 13:13:45] -rw-r--r-- 2 boincer umatlas    503556 Feb 22 09:12 input.tar.gz
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas         0 Feb 22 09:12 boinc_lockfile
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas      2546 Feb 22 10:31 pandaJob.out
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas       424 Feb 22 10:31 setup.sh.local
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas    987736 Feb 22 10:31 agis_schedconf.cvmfs.json
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas      5871 Feb 22 13:09 init_data.xml
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas        96 Feb 22 13:12 pilot_heartbeat.json
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas 327159166 Feb 22 13:12 HITS.43205094._035303.pool.root.1
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas       533 Feb 22 13:12 boinc_task_state.xml
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas      1051 Feb 22 13:13 memory_monitor_summary.json
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas   1582569 Feb 22 13:13 agis_ddmendpoints.agis.ALL.json
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas    404636 Feb 22 13:13 log.43205094._035303.job.log.tgz.1
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas      7769 Feb 22 13:13 heartbeat.json
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas        29 Feb 22 13:13 wrapper_checkpoint.txt
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas      8192 Feb 22 13:13 boinc_mmap_file
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas      4596 Feb 22 13:13 pilotlog.txt
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas    939270 Feb 22 13:13 log.43205094._035303.job.log.1
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas       357 Feb 22 13:13 output.list
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas       620 Feb 22 13:13 runtime_log
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas   1361920 Feb 22 13:13 result.tar.gz
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas     11100 Feb 22 13:13 runtime_log.err
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas       787 Feb 22 13:13 Eq5KDmRsv56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmfQtKDmHn9yGo.diag
[2025-02-22 13:13:45] -rw-r--r-- 1 boincer umatlas     23752 Feb 22 13:13 stderr.txt
[2025-02-22 13:13:45] HITS file was successfully produced:
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas 327159166 Feb 22 13:12 shared/HITS.pool.root.1
[2025-02-22 13:13:45]  *** Contents of shared directory: ***
[2025-02-22 13:13:45] total 656836
[2025-02-22 13:13:45] -rw-r--r-- 3 boincer umatlas 343545991 Feb 22 09:12 ATLAS.root_0
[2025-02-22 13:13:45] -rw-r--r-- 2 boincer umatlas     17569 Feb 22 09:12 start_atlas.sh
[2025-02-22 13:13:45] -rw-r--r-- 2 boincer umatlas    503556 Feb 22 09:12 input.tar.gz
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas 327159166 Feb 22 13:12 HITS.pool.root.1
[2025-02-22 13:13:45] -rw------- 1 boincer umatlas   1361920 Feb 22 13:13 result.tar.gz
13:13:46 (24292): run_atlas exited; CPU time 101324.135670
13:13:46 (24292): called boinc_finish(0)

</stderr_txt>
]]>

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