Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-22 16:02:03 (17600): Detected: vboxwrapper 26206
2025-02-22 16:02:03 (17600): Detected: BOINC client v8.0.2
2025-02-22 16:02:03 (17600): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-02-22 16:02:04 (17600): Successfully copied 'init_data.xml' to the shared directory.
2025-02-22 16:02:04 (17600): Create VM. (boinc_40851944352a4a21, slot#9)
2025-02-22 16:02:05 (17600): Setting Memory Size for VM. (4300MB)
2025-02-22 16:02:05 (17600): Setting CPU Count for VM. (3)
2025-02-22 16:02:05 (17600): Setting Chipset Options for VM.
2025-02-22 16:02:05 (17600): Setting Graphics Controller Options for VM.
2025-02-22 16:02:06 (17600): Setting Boot Options for VM.
2025-02-22 16:02:06 (17600): Setting Network Configuration for NAT.
2025-02-22 16:02:06 (17600): Enabling VM Network Access.
2025-02-22 16:02:06 (17600): Disabling USB Support for VM.
2025-02-22 16:02:07 (17600): Disabling COM Port Support for VM.
2025-02-22 16:02:07 (17600): Disabling LPT Port Support for VM.
2025-02-22 16:02:07 (17600): Disabling Audio Support for VM.
2025-02-22 16:02:07 (17600): Disabling Clipboard Support for VM.
2025-02-22 16:02:08 (17600): Disabling Drag and Drop Support for VM.
2025-02-22 16:02:08 (17600): Adding storage controller(s) to VM.
2025-02-22 16:02:08 (17600): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-22 16:02:09 (17600): Adding VirtualBox Guest Additions to VM.
2025-02-22 16:02:09 (17600): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-22 16:02:09 (17600): forwarding host port 56275 to guest port 80
2025-02-22 16:02:10 (17600): Enabling remote desktop for VM.
2025-02-22 16:02:10 (17600): Enabling shared directory for VM.
2025-02-22 16:02:11 (17600): Starting VM using VBoxManage interface. (boinc_40851944352a4a21, slot#9)
2025-02-22 16:02:16 (17600): Successfully started VM. (PID = '27100')
2025-02-22 16:02:16 (17600): Reporting VM Process ID to BOINC.
2025-02-22 16:02:16 (17600): Guest Log: BIOS: VirtualBox 7.0.22
2025-02-22 16:02:16 (17600): Guest Log: CPUID EDX: 0x178bfbff
2025-02-22 16:02:16 (17600): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-22 16:02:16 (17600): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-22 16:02:16 (17600): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-22 16:02:16 (17600): Detected: Web Application Enabled (http://localhost:56275)
2025-02-22 16:02:16 (17600): Detected: Remote Desktop Enabled (localhost:56276)
2025-02-22 16:02:16 (17600): Preference change detected
2025-02-22 16:02:16 (17600): Setting CPU throttle for VM. (90%)
2025-02-22 16:02:16 (17600): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-22 16:02:18 (17600): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-22 16:02:18 (17600): Guest Log: BIOS: Booting from Hard Disk...
2025-02-22 16:02:20 (17600): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-22 16:02:20 (17600): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-22 16:02:20 (17600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-22 16:02:25 (17600): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-22 16:02:25 (17600): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-22 16:02:29 (17600): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-22 16:02:29 (17600): Guest Log: 00:00:00.000087 main     Log opened 2025-02-22T16:02:27.172973000Z
2025-02-22 16:02:29 (17600): Guest Log: 00:00:00.000194 main     OS Product: Linux
2025-02-22 16:02:29 (17600): Guest Log: 00:00:00.000216 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-22 16:02:29 (17600): Guest Log: 00:00:00.000231 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-22 16:02:29 (17600): Guest Log: 00:00:00.000246 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-22 16:02:29 (17600): Guest Log: 00:00:00.000247 main     Process ID: 1283
2025-02-22 16:02:29 (17600): Guest Log: 00:00:00.000247 main     Package type: LINUX_64BITS_GENERIC
2025-02-22 16:02:29 (17600): Guest Log: 00:00:00.000754 main     5.2.32 r132073 started. Verbose level = 0
2025-02-22 16:02:29 (17600): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-22 16:02:29 (17600): Guest Log: [INFO] Mounting shared directory
2025-02-22 16:02:29 (17600): Guest Log: [INFO] Checking for init_data.xml
2025-02-22 16:02:39 (17600): Guest Log: 00:00:10.002352 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 771 041 000ns (GuestNow=1 740 236 558 403 576 000 ns GuestLast=1 740 240 147 174 617 000 ns fSetTimeLastLoop=true )
2025-02-22 16:02:45 (17600): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-22 16:02:45 (17600): Guest Log: [INFO] Detected branch: prod
2025-02-22 16:02:45 (17600): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-22 16:02:45 (17600): Guest Log: Copying input files
2025-02-22 16:02:46 (17600): Guest Log: Copied input files into RunAtlas.
2025-02-22 16:02:46 (17600): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-22 16:02:46 (17600): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-22 16:02:46 (17600): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-22 16:02:46 (17600): Guest Log: Further information can be found at the LHC@home message board.
2025-02-22 16:02:56 (17600): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-22 16:02:56 (17600): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-22 16:02:56 (17600): Guest Log: 2.6.3.0 1561 0 30128 142943 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-22 16:02:56 (17600): Guest Log: copied the webapp to /var/www
2025-02-22 16:02:56 (17600): Guest Log: ATHENA_PROC_NUMBER=3
2025-02-22 16:02:56 (17600): Guest Log: ATHENA_CORE_NUMBER=3
2025-02-22 16:02:59 (17600): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-22 16:02:59 (17600): Guest Log:  *** Starting ATLAS job. (PandaID=6522629368 taskID=43205094) ***
2025-02-22 16:49:45 (17600): Preference change detected
2025-02-22 16:49:45 (17600): Setting CPU throttle for VM. (75%)
2025-02-22 16:49:45 (17600): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-22 16:50:58 (17600): Preference change detected
2025-02-22 16:50:58 (17600): Setting CPU throttle for VM. (60%)
2025-02-22 16:50:58 (17600): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-22 16:51:09 (17600): Preference change detected
2025-02-22 16:51:09 (17600): Setting CPU throttle for VM. (60%)
2025-02-22 16:51:09 (17600): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-22 17:42:19 (17600): Status Report: Elapsed Time: '6000.000000'
2025-02-22 17:42:19 (17600): Status Report: CPU Time: '297.390625'
2025-02-22 19:22:22 (17600): Status Report: Elapsed Time: '12000.000000'
2025-02-22 19:22:22 (17600): Status Report: CPU Time: '5800.593750'
2025-02-22 21:02:25 (17600): Status Report: Elapsed Time: '18000.000000'
2025-02-22 21:02:25 (17600): Status Report: CPU Time: '16630.937500'
2025-02-22 22:42:28 (17600): Status Report: Elapsed Time: '24000.000000'
2025-02-22 22:42:28 (17600): Status Report: CPU Time: '27460.421875'
2025-02-23 00:22:31 (17600): Status Report: Elapsed Time: '30000.000000'
2025-02-23 00:22:31 (17600): Status Report: CPU Time: '38294.765625'
2025-02-23 02:02:34 (17600): Status Report: Elapsed Time: '36000.000000'
2025-02-23 02:02:34 (17600): Status Report: CPU Time: '49129.640625'
2025-02-23 03:01:17 (17600): Guest Log:  *** Job finished ***
2025-02-23 03:01:17 (17600): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:31,981 | INFO     | [data] queue_monitor thread has finished
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:36,085 | INFO     | job.realtimelogging is not enabled
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:37,085 | INFO     | [payload] run_realtimelog thread has finished
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:37,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516642977600)>', '<ExcThread(monitor, started 140515534161664)>']
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:37,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:37,742 | INFO     | [monitor] control thread has ended
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:42,617 | INFO     | all workflow threads have been joined
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:42,617 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:42,618 | INFO     | traces error code: 0
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:42,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:42,710 [wrapper] ==== pilot stdout END ====
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:42,713 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:42,716 [wrapper] pilotpid: 6525
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:42,719 [wrapper] Pilot exit status: 0
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:43,138 [wrapper] pandaids: 6522629368
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:43,153 [wrapper] cleanup supervisor_pilot 16233 6526
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:43,156 [wrapper] Test setup, not cleaning
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:43,161 [wrapper] apfmon messages muted
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:43,163 [wrapper] ==== wrapper stdout END ====
2025-02-23 03:01:17 (17600): Guest Log: 2025-02-23 02:01:43,166 [wrapper] ==== wrapper stderr END ====
2025-02-23 03:01:17 (17600): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 03:01:17 (17600): Guest Log:     "exeErrorCode": 0,
2025-02-23 03:01:17 (17600): Guest Log:     "exeErrorDiag": "",
2025-02-23 03:01:17 (17600): Guest Log:     "pilotErrorCode": 0,
2025-02-23 03:01:17 (17600): Guest Log:     "pilotErrorDiag": "",
2025-02-23 03:01:17 (17600): Guest Log:  *** Listing of results directory ***
2025-02-23 03:01:17 (17600): Guest Log: total 324784
2025-02-23 03:01:17 (17600): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 22 02:00 pilot3.tar.gz
2025-02-23 03:01:17 (17600): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 22 02:15 queuedata.json
2025-02-23 03:01:17 (17600): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 22 02:16 runpilot2-wrapper.sh
2025-02-23 03:01:17 (17600): Guest Log: -rwxr-xr-x. 1 atlas atlas      9068 Feb 22 15:02 init_data.xml
2025-02-23 03:01:17 (17600): Guest Log: -rwxr-xr-x. 1 atlas atlas    503556 Feb 22 15:02 input.tar.gz
2025-02-23 03:01:17 (17600): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 22 15:02 start_atlas.sh
2025-02-23 03:01:17 (17600): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 22 15:02 EVNT.43092757._001768.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 03:01:17 (17600): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Feb 22 15:02 pandaJob.out
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas       424 Feb 22 15:13 setup.sh.local
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas    987736 Feb 22 15:54 agis_schedconf.cvmfs.json
2025-02-23 03:01:17 (17600): Guest Log: drwx------. 4 atlas atlas      4096 Feb 22 15:54 pilot3
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas        96 Feb 23 02:00 pilot_heartbeat.json
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas 322384540 Feb 23 02:00 HITS.43205094._034827.pool.root.1
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas      1026 Feb 23 02:01 memory_monitor_summary.json
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 23 02:01 agis_ddmendpoints.agis.ALL.json
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas    492695 Feb 23 02:01 log.43205094._034827.job.log.tgz.1
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas      7717 Feb 23 02:01 heartbeat.json
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas      4470 Feb 23 02:01 pilotlog.txt
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas   2731610 Feb 23 02:01 log.43205094._034827.job.log.1
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas       357 Feb 23 02:01 output.list
2025-02-23 03:01:17 (17600): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 23 02:01 runtime_log
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas   3246080 Feb 23 02:01 result.tar.gz
2025-02-23 03:01:17 (17600): Guest Log: -rw-r--r--. 1 atlas atlas     10912 Feb 23 02:01 runtime_log.err
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas       649 Feb 23 02:01 86fMDmsEu56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmTLtKDmPn4d2n.diag
2025-02-23 03:01:17 (17600): Guest Log: Looking for outputfile HITS.43205094._034827.pool.root.1
2025-02-23 03:01:17 (17600): Guest Log: HITS file was successfully produced
2025-02-23 03:01:17 (17600): Guest Log: -rw-------. 1 atlas atlas 322384540 Feb 23 02:00 /home/atlas/RunAtlas/HITS.43205094._034827.pool.root.1
2025-02-23 03:01:18 (17600): Guest Log: Successfully finished the ATLAS job!
2025-02-23 03:01:18 (17600): Guest Log: Copying the results back to the shared directory!
2025-02-23 03:01:18 (17600): Guest Log:  *** Contents of shared directory: ***
2025-02-23 03:01:18 (17600): Guest Log: total 653056
2025-02-23 03:01:18 (17600): Guest Log: -rwxrwxrwx. 1 root root 342554958 Feb 22 15:02 ATLAS.root_0
2025-02-23 03:01:18 (17600): Guest Log: -rwxrwxrwx. 1 root root 322384540 Feb 23 02:01 HITS.pool.root.1
2025-02-23 03:01:18 (17600): Guest Log: -rwxrwxrwx. 1 root root      9068 Feb 22 15:02 init_data.xml
2025-02-23 03:01:18 (17600): Guest Log: -rwxrwxrwx. 1 root root    503556 Feb 22 14:03 input.tar.gz
2025-02-23 03:01:18 (17600): Guest Log: -rwxrwxrwx. 1 root root   3246080 Feb 23 02:01 result.tar.gz
2025-02-23 03:01:18 (17600): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 22 14:03 start_atlas.sh
2025-02-23 03:01:18 (17600): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 03:01:18 (17600): VM Completion File Detected.
2025-02-23 03:01:18 (17600): Powering off VM.
2025-02-23 03:01:18 (17600): Successfully stopped VM.
2025-02-23 03:01:18 (17600): Deregistering VM. (boinc_40851944352a4a21, slot#9)
2025-02-23 03:01:18 (17600): Removing network bandwidth throttle group from VM.
2025-02-23 03:01:19 (17600): Removing VM from VirtualBox.
03:01:24 (17600): called boinc_finish(0)

</stderr_txt>
]]>

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