Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:01:02 (3326827): wrapper (7.7.26015): starting
02:01:02 (3326827): wrapper: running run_atlas (--nthreads 4)
[2025-02-25 02:01:02] Arguments: --nthreads 4
[2025-02-25 02:01:02] Threads: 4
[2025-02-25 02:01:02] Checking for CVMFS
[2025-02-25 02:01:02] No cvmfs_config command found, will try listing directly
[2025-02-25 02:01:02] CVMFS is ok
[2025-02-25 02:01:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 02:01:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 02:01:02] Further information can be found at the LHC@home message board.
[2025-02-25 02:01:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 02:01:02] Checking for apptainer binary...
[2025-02-25 02:01:02] which: no apptainer in ((null))
[2025-02-25 02:01:02] apptainer is not installed, using version from CVMFS
[2025-02-25 02:01:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 02:01:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-02-25 02:01:02] apptainer works
[2025-02-25 02:01:02] Set ATHENA_PROC_NUMBER=4
[2025-02-25 02:01:02] Set ATHENA_CORE_NUMBER=4
[2025-02-25 02:01:02] Starting ATLAS job with PandaID=6522811827
[2025-02-25 02:01:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 08:03:31]  *** The last 200 lines of the pilot log: ***
[2025-02-25 08:03:31] 2025-02-25 06:59:24,584 | INFO     | sum of square deviations: 13523929848.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,587 | INFO     | sum of deviations: 136702486936.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,587 | INFO     | mean x: 1740456014.5
[2025-02-25 08:03:31] 2025-02-25 06:59:24,587 | INFO     | mean y: 2335852.471590909
[2025-02-25 08:03:31] 2025-02-25 06:59:24,587 | INFO     | -- intersect: -17590528666.86445
[2025-02-25 08:03:31] 2025-02-25 06:59:24,588 | INFO     | intersect: -17590528666.86445
[2025-02-25 08:03:31] 2025-02-25 06:59:24,588 | INFO     | chi2: 5.182569323445931
[2025-02-25 08:03:31] 2025-02-25 06:59:24,588 | INFO     | model: linear, x: [1740445309.0, 1740445370.0, 1740445431.0, 1740445492.0, 1740445553.0, 1740445614.0, 1740445675.0, 1740445736.0, 1740445797.0, 1740445858.0, 1740
[2025-02-25 08:03:31] 2025-02-25 06:59:24,589 | INFO     | sum of square deviations: 12955770358.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,592 | INFO     | sum of deviations: 157322487797.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,592 | INFO     | mean x: 1740455862.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,592 | INFO     | mean y: 2341316.6772334296
[2025-02-25 08:03:31] 2025-02-25 06:59:24,592 | INFO     | -- intersect: -21132090565.37883
[2025-02-25 08:03:31] 2025-02-25 06:59:24,592 | INFO     | intersect: -21132090565.37883
[2025-02-25 08:03:31] 2025-02-25 06:59:24,593 | INFO     | chi2: 4.389135496937387
[2025-02-25 08:03:31] 2025-02-25 06:59:24,593 | INFO     | current chi2=4.389135496937387 (change=15.309661617434653 %)
[2025-02-25 08:03:31] 2025-02-25 06:59:24,593 | INFO     | right removable region: 346
[2025-02-25 08:03:31] 2025-02-25 06:59:24,593 | INFO     | model: linear, x: [1740445614.0, 1740445675.0, 1740445736.0, 1740445797.0, 1740445858.0, 1740445919.0, 1740445980.0, 1740446041.0, 1740446102.0, 1740446163.0, 1740
[2025-02-25 08:03:31] 2025-02-25 06:59:24,596 | INFO     | sum of square deviations: 12955770358.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,599 | INFO     | sum of deviations: 50516488760.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,599 | INFO     | mean x: 1740456167.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,599 | INFO     | mean y: 2358949.250720461
[2025-02-25 08:03:31] 2025-02-25 06:59:24,599 | INFO     | -- intersect: -6783940280.207125
[2025-02-25 08:03:31] 2025-02-25 06:59:24,599 | INFO     | intersect: -6783940280.207125
[2025-02-25 08:03:31] 2025-02-25 06:59:24,600 | INFO     | chi2: 2.5702727515431
[2025-02-25 08:03:31] 2025-02-25 06:59:24,600 | INFO     | current chi2=2.5702727515431 (change=50.40543423287765 %)
[2025-02-25 08:03:31] 2025-02-25 06:59:24,601 | INFO     | model: linear, x: [1740445919.0, 1740445980.0, 1740446041.0, 1740446102.0, 1740446163.0, 1740446224.0, 1740446285.0, 1740446346.0, 1740446407.0, 1740446468.0, 1740
[2025-02-25 08:03:31] 2025-02-25 06:59:24,601 | INFO     | sum of square deviations: 12403750705.5
[2025-02-25 08:03:31] 2025-02-25 06:59:24,604 | INFO     | sum of deviations: -18894155067.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,604 | INFO     | mean x: 1740456319.5
[2025-02-25 08:03:31] 2025-02-25 06:59:24,604 | INFO     | mean y: 2378124.8830409357
[2025-02-25 08:03:31] 2025-02-25 06:59:24,604 | INFO     | -- intersect: 2653548111.183367
[2025-02-25 08:03:31] 2025-02-25 06:59:24,604 | INFO     | intersect: 2653548111.183367
[2025-02-25 08:03:31] 2025-02-25 06:59:24,605 | INFO     | chi2: 0.995229186177848
[2025-02-25 08:03:31] 2025-02-25 06:59:24,605 | INFO     | current chi2=0.995229186177848 (change=61.279238338407936 %)
[2025-02-25 08:03:31] 2025-02-25 06:59:24,605 | INFO     | model: linear, x: [1740446224.0, 1740446285.0, 1740446346.0, 1740446407.0, 1740446468.0, 1740446529.0, 1740446590.0, 1740446651.0, 1740446712.0, 1740446773.0, 1740
[2025-02-25 08:03:31] 2025-02-25 06:59:24,605 | INFO     | sum of square deviations: 11867638328.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,608 | INFO     | sum of deviations: -36082981141.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,608 | INFO     | mean x: 1740456472.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,609 | INFO     | mean y: 2382996.178041543
[2025-02-25 08:03:31] 2025-02-25 06:59:24,609 | INFO     | -- intersect: 5294156836.954578
[2025-02-25 08:03:31] 2025-02-25 06:59:24,609 | INFO     | intersect: 5294156836.954578
[2025-02-25 08:03:31] 2025-02-25 06:59:24,609 | INFO     | chi2: 0.8667225427331542
[2025-02-25 08:03:31] 2025-02-25 06:59:24,609 | INFO     | current chi2=0.8667225427331542 (change=12.912266363310767 %)
[2025-02-25 08:03:31] 2025-02-25 06:59:24,609 | INFO     | left removable region: 30
[2025-02-25 08:03:31] 2025-02-25 06:59:24,610 | INFO     | model: linear, x: [1740447139.0, 1740447200.0, 1740447261.0, 1740447322.0, 1740447383.0, 1740447444.0, 1740447505.0, 1740447566.0, 1740447627.0, 1740447688.0, 1740
[2025-02-25 08:03:31] 2025-02-25 06:59:24,610 | INFO     | sum of square deviations: 9784425315.0
[2025-02-25 08:03:31] 2025-02-25 06:59:24,613 | INFO     | sum of deviations: -15994911046.499998
[2025-02-25 08:03:31] 2025-02-25 06:59:24,613 | INFO     | mean x: 1740456746.5
[2025-02-25 08:03:31] 2025-02-25 06:59:24,613 | INFO     | mean y: 2389996.9588607596
[2025-02-25 08:03:31] 2025-02-25 06:59:24,613 | INFO     | -- intersect: 2847569958.409494
[2025-02-25 08:03:31] 2025-02-25 06:59:24,613 | INFO     | intersect: 2847569958.409494
[2025-02-25 08:03:31] 2025-02-25 06:59:24,613 | INFO     | chi2: 0.018657194376833715
[2025-02-25 08:03:31] 2025-02-25 06:59:24,613 | INFO     | -- intersect: 2847569958.409494
[2025-02-25 08:03:31] 2025-02-25 06:59:24,613 | INFO     | current memory leak: -1.63 B/s (using 316 data points, chi2=0.02)
[2025-02-25 08:03:31] 2025-02-25 06:59:24,614 | INFO     | ..............................
[2025-02-25 08:03:31] 2025-02-25 06:59:24,614 | INFO     | . Timing measurements:
[2025-02-25 08:03:31] 2025-02-25 06:59:24,615 | INFO     | . get job = 0 s
[2025-02-25 08:03:31] 2025-02-25 06:59:24,615 | INFO     | . initial setup = 1 s
[2025-02-25 08:03:31] 2025-02-25 06:59:24,615 | INFO     | . payload setup = 8 s
[2025-02-25 08:03:31] 2025-02-25 06:59:24,615 | INFO     | . stage-in = 0 s
[2025-02-25 08:03:31] 2025-02-25 06:59:24,615 | INFO     | . payload execution = 21451 s
[2025-02-25 08:03:31] 2025-02-25 06:59:24,615 | INFO     | . stage-out = 1 s
[2025-02-25 08:03:31] 2025-02-25 06:59:24,615 | INFO     | . log creation = 0 s
[2025-02-25 08:03:31] 2025-02-25 06:59:24,615 | INFO     | ..............................
[2025-02-25 08:03:31] 2025-02-25 06:59:25,049 | INFO     | 
[2025-02-25 08:03:31] 2025-02-25 06:59:25,050 | INFO     | job summary report
[2025-02-25 08:03:31] 2025-02-25 06:59:25,050 | INFO     | --------------------------------------------------
[2025-02-25 08:03:31] 2025-02-25 06:59:25,050 | INFO     | PanDA job id: 6522811827
[2025-02-25 08:03:31] 2025-02-25 06:59:25,050 | INFO     | task id: 43205075
[2025-02-25 08:03:31] 2025-02-25 06:59:25,050 | INFO     | errors: (none)
[2025-02-25 08:03:31] 2025-02-25 06:59:25,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 08:03:31] 2025-02-25 06:59:25,050 | INFO     | pilot state: finished 
[2025-02-25 08:03:31] 2025-02-25 06:59:25,050 | INFO     | transexitcode: 0
[2025-02-25 08:03:31] 2025-02-25 06:59:25,050 | INFO     | exeerrorcode: 0
[2025-02-25 08:03:31] 2025-02-25 06:59:25,050 | INFO     | exeerrordiag: 
[2025-02-25 08:03:31] 2025-02-25 06:59:25,050 | INFO     | exitcode: 0
[2025-02-25 08:03:31] 2025-02-25 06:59:25,051 | INFO     | exitmsg: OK
[2025-02-25 08:03:31] 2025-02-25 06:59:25,051 | INFO     | cpuconsumptiontime: 81446 s
[2025-02-25 08:03:31] 2025-02-25 06:59:25,051 | INFO     | nevents: 400
[2025-02-25 08:03:31] 2025-02-25 06:59:25,051 | INFO     | neventsw: 0
[2025-02-25 08:03:31] 2025-02-25 06:59:25,051 | INFO     | pid: 3340532
[2025-02-25 08:03:31] 2025-02-25 06:59:25,051 | INFO     | pgrp: 3340532
[2025-02-25 08:03:31] 2025-02-25 06:59:25,051 | INFO     | corecount: 4
[2025-02-25 08:03:31] 2025-02-25 06:59:25,051 | INFO     | event service: False
[2025-02-25 08:03:31] 2025-02-25 06:59:25,051 | INFO     | sizes: {0: 2383377, 7: 2383583, 11: 2383611, 21463: 2416955, 21465: 2426002, 21471: 2426116}
[2025-02-25 08:03:31] 2025-02-25 06:59:25,051 | INFO     | --------------------------------------------------
[2025-02-25 08:03:31] 2025-02-25 06:59:25,051 | INFO     | 
[2025-02-25 08:03:31] 2025-02-25 06:59:25,051 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2025-02-25 08:03:31] 2025-02-25 06:59:25,079 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,079 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,080 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,080 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,080 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,080 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,080 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,080 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,080 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,080 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,080 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,081 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 08:03:31] 2025-02-25 06:59:25,081 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,081 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 08:03:31] 2025-02-25 06:59:25,081 | INFO     | job 6522811827 has completed (purged errors)
[2025-02-25 08:03:31] 2025-02-25 06:59:25,081 | INFO     | overall cleanup function is called
[2025-02-25 08:03:31] 2025-02-25 06:59:26,090 | INFO     | --- collectZombieJob: --- 10, [3340532]
[2025-02-25 08:03:31] 2025-02-25 06:59:26,090 | INFO     | zombie collector waiting for pid 3340532
[2025-02-25 08:03:31] 2025-02-25 06:59:26,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 08:03:31] 2025-02-25 06:59:26,091 | INFO     | collected zombie processes
[2025-02-25 08:03:31] 2025-02-25 06:59:26,091 | INFO     | will attempt to kill all subprocesses of pid=3340532
[2025-02-25 08:03:31] 2025-02-25 06:59:26,442 | INFO     | process IDs to be killed: [3340532] (in reverse order)
[2025-02-25 08:03:31] 2025-02-25 06:59:26,687 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 08:03:31] 2025-02-25 06:59:26,687 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 08:03:31] 2025-02-25 06:59:26,746 | INFO     | did not find any defunct processes belonging to 3340532
[2025-02-25 08:03:31] 2025-02-25 06:59:26,804 | INFO     | did not find any defunct processes belonging to 3340532
[2025-02-25 08:03:31] 2025-02-25 06:59:26,805 | INFO     | ready for new job
[2025-02-25 08:03:31] 2025-02-25 06:59:26,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 08:03:31] 2025-02-25 06:59:26,808 | INFO     | **************************************
[2025-02-25 08:03:31] 2025-02-25 06:59:26,808 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 08:03:31] 2025-02-25 06:59:26,808 | INFO     | **************************************
[2025-02-25 08:03:31] 2025-02-25 06:59:26,808 | INFO     | 
[2025-02-25 08:03:31] 2025-02-25 06:59:26,819 | INFO     | architecture information:
[2025-02-25 08:03:31] 2025-02-25 06:59:26,820 | INFO     | executing command: cat /etc/os-release
[2025-02-25 08:03:31] 2025-02-25 06:59:26,845 | INFO     | cat /etc/os-release:
[2025-02-25 08:03:31] NAME="CentOS Linux"
[2025-02-25 08:03:31] VERSION="7 (Core)"
[2025-02-25 08:03:31] ID="centos"
[2025-02-25 08:03:31] ID_LIKE="rhel fedora"
[2025-02-25 08:03:31] VERSION_ID="7"
[2025-02-25 08:03:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 08:03:31] ANSI_COLOR="0;31"
[2025-02-25 08:03:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 08:03:31] HOME_URL="https://www.centos.org/"
[2025-02-25 08:03:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 08:03:31] 
[2025-02-25 08:03:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 08:03:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 08:03:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 08:03:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 08:03:31] 
[2025-02-25 08:03:31] 2025-02-25 06:59:26,845 | INFO     | **************************************
[2025-02-25 08:03:31] 2025-02-25 06:59:27,348 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2025-02-25 08:03:31] 2025-02-25 06:59:27,375 | INFO     | sufficient remaining disk space (3238022610944 B)
[2025-02-25 08:03:31] 2025-02-25 06:59:27,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 08:03:31] 2025-02-25 06:59:27,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 08:03:31] 2025-02-25 06:59:27,378 | INFO     | PID=3330781 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-02-25 08:03:31] 2025-02-25 06:59:27,379 | INFO     | .. there are 15 such processes running
[2025-02-25 08:03:31] 2025-02-25 06:59:27,379 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 08:03:31] 2025-02-25 06:59:27,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 08:03:31] 2025-02-25 06:59:27,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 08:03:31] 2025-02-25 06:59:27,456 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 08:03:31] 2025-02-25 06:59:27,457 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 08:03:31] 2025-02-25 06:59:27,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 08:03:31] 2025-02-25 06:59:27,457 | INFO     | will abort loop
[2025-02-25 08:03:31] 2025-02-25 06:59:27,973 | INFO     | all data control threads have been joined
[2025-02-25 08:03:31] 2025-02-25 06:59:28,060 | INFO     | all payload control threads have been joined
[2025-02-25 08:03:31] 2025-02-25 06:59:28,275 | INFO     | all job control threads have been joined
[2025-02-25 08:03:31] 2025-02-25 06:59:28,381 | INFO     | [job] retrieve thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:28,382 | INFO     | [payload] failed_post thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:28,462 | INFO     | [job] job monitor thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:28,843 | INFO     | [payload] validate_post thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:28,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 08:03:31] 2025-02-25 06:59:28,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 08:03:31] 2025-02-25 06:59:28,979 | INFO     | [data] control thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:28,982 | INFO     | [job] validate thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:29,066 | INFO     | [payload] control thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:29,280 | INFO     | [job] control thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:29,376 | INFO     | [data] copytool_in thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:29,481 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:29,485 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:29,648 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:29,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 08:03:31] 2025-02-25 06:59:30,728 | INFO     | [job] queue monitor thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:30,855 | INFO     | [data] copytool_out thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:32,958 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:38,182 | INFO     | job.realtimelogging is not enabled
[2025-02-25 08:03:31] 2025-02-25 06:59:39,185 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 08:03:31] 2025-02-25 06:59:39,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22506256353088)>', '<ExcThread(monitor, started 22505951565568)>']
[2025-02-25 08:03:31] 2025-02-25 06:59:39,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 08:03:31] 2025-02-25 06:59:39,439 | INFO     | [monitor] control thread has ended
[2025-02-25 08:03:31] 2025-02-25 06:59:44,323 | INFO     | all workflow threads have been joined
[2025-02-25 08:03:31] 2025-02-25 06:59:44,323 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 08:03:31] 2025-02-25 06:59:44,323 | INFO     | traces error code: 0
[2025-02-25 08:03:31] 2025-02-25 06:59:44,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 08:03:31] 2025-02-25 06:59:44,470 [wrapper] ==== pilot stdout END ====
[2025-02-25 08:03:31] 2025-02-25 06:59:44,475 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 08:03:31] 2025-02-25 06:59:44,479 [wrapper] pilotpid: 3330781
[2025-02-25 08:03:31] 2025-02-25 06:59:44,483 [wrapper] Pilot exit status: 0
[2025-02-25 08:03:31] 2025-02-25 06:59:44,498 [wrapper] pandaids: 6522811827
[2025-02-25 08:03:31] 2025-02-25 06:59:44,659 [wrapper] cleanup supervisor_pilot  166198 3330782
[2025-02-25 08:03:31] 2025-02-25 06:59:44,665 [wrapper] Test setup, not cleaning
[2025-02-25 08:03:31] 2025-02-25 06:59:44,673 [wrapper] apfmon messages muted
[2025-02-25 08:03:31] 2025-02-25 06:59:44,678 [wrapper] ==== wrapper stdout END ====
[2025-02-25 08:03:31] 2025-02-25 06:59:44,681 [wrapper] ==== wrapper stderr END ====
[2025-02-25 08:03:31]  *** Error codes and diagnostics ***
[2025-02-25 08:03:31]     "exeErrorCode": 0,
[2025-02-25 08:03:31]     "exeErrorDiag": "",
[2025-02-25 08:03:31]     "pilotErrorCode": 0,
[2025-02-25 08:03:31]     "pilotErrorDiag": "",
[2025-02-25 08:03:31]  *** Listing of results directory ***
[2025-02-25 08:03:31] total 661524
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc    491065 Feb 22 08:11 pilot3.tar.gz
[2025-02-25 08:03:31] -rwx------ 1 boinc boinc     35865 Feb 22 08:24 runpilot2-wrapper.sh
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc      5118 Feb 22 08:24 queuedata.json
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc       100 Feb 25 02:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 08:03:31] -rwxr-xr-x 1 boinc boinc      7986 Feb 25 02:00 run_atlas
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc       105 Feb 25 02:00 job.xml
[2025-02-25 08:03:31] -rw-r--r-- 2 boinc boinc 346646209 Feb 25 02:01 EVNT.43092757._000978.pool.root.1
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc      6676 Feb 25 02:01 init_data.xml
[2025-02-25 08:03:31] -rw-r--r-- 2 boinc boinc     17569 Feb 25 02:01 start_atlas.sh
[2025-02-25 08:03:31] drwxrwx--x 2 boinc boinc      4096 Feb 25 02:01 shared
[2025-02-25 08:03:31] -rw-r--r-- 2 boinc boinc    503554 Feb 25 02:01 input.tar.gz
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc         0 Feb 25 02:01 boinc_lockfile
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc      2554 Feb 25 02:01 pandaJob.out
[2025-02-25 08:03:31] -rw------- 1 boinc boinc       424 Feb 25 02:01 setup.sh.local
[2025-02-25 08:03:31] -rw------- 1 boinc boinc    988859 Feb 25 02:01 agis_schedconf.cvmfs.json
[2025-02-25 08:03:31] drwx------ 4 boinc boinc      4096 Feb 25 02:01 pilot3
[2025-02-25 08:03:31] -rw------- 1 boinc boinc 321435559 Feb 25 07:58 HITS.43205075._058381.pool.root.1
[2025-02-25 08:03:31] -rw------- 1 boinc boinc        95 Feb 25 07:58 pilot_heartbeat.json
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc       529 Feb 25 07:58 boinc_task_state.xml
[2025-02-25 08:03:31] -rw------- 1 boinc boinc      1031 Feb 25 07:59 memory_monitor_summary.json
[2025-02-25 08:03:31] -rw------- 1 boinc boinc   1582569 Feb 25 07:59 agis_ddmendpoints.agis.ALL.json
[2025-02-25 08:03:31] -rw------- 1 boinc boinc    422597 Feb 25 07:59 log.43205075._058381.job.log.tgz.1
[2025-02-25 08:03:31] -rw------- 1 boinc boinc      7705 Feb 25 07:59 heartbeat.json
[2025-02-25 08:03:31] -rw------- 1 boinc boinc      4880 Feb 25 07:59 pilotlog.txt
[2025-02-25 08:03:31] -rw------- 1 boinc boinc   2330005 Feb 25 07:59 log.43205075._058381.job.log.1
[2025-02-25 08:03:31] -rw------- 1 boinc boinc       357 Feb 25 07:59 output.list
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc       620 Feb 25 07:59 runtime_log
[2025-02-25 08:03:31] -rw------- 1 boinc boinc   2775040 Feb 25 07:59 result.tar.gz
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc     11424 Feb 25 07:59 runtime_log.err
[2025-02-25 08:03:31] -rw------- 1 boinc boinc       666 Feb 25 07:59 UrENDmP3y56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmFftKDm29eYOn.diag
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc        27 Feb 25 08:03 wrapper_checkpoint.txt
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc      8192 Feb 25 08:03 boinc_mmap_file
[2025-02-25 08:03:31] -rw-r--r-- 1 boinc boinc     21280 Feb 25 08:03 stderr.txt
[2025-02-25 08:03:31] HITS file was successfully produced:
[2025-02-25 08:03:31] -rw------- 1 boinc boinc 321435559 Feb 25 07:58 shared/HITS.pool.root.1
[2025-02-25 08:03:31]  *** Contents of shared directory: ***
[2025-02-25 08:03:31] total 655660
[2025-02-25 08:03:31] -rw-r--r-- 2 boinc boinc 346646209 Feb 25 02:01 ATLAS.root_0
[2025-02-25 08:03:31] -rw-r--r-- 2 boinc boinc     17569 Feb 25 02:01 start_atlas.sh
[2025-02-25 08:03:31] -rw-r--r-- 2 boinc boinc    503554 Feb 25 02:01 input.tar.gz
[2025-02-25 08:03:31] -rw------- 1 boinc boinc 321435559 Feb 25 07:58 HITS.pool.root.1
[2025-02-25 08:03:31] -rw------- 1 boinc boinc   2775040 Feb 25 07:59 result.tar.gz
08:03:32 (3326827): run_atlas exited; CPU time 81094.860987
08:03:32 (3326827): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN