Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:00:25 (3623637): wrapper (7.7.26015): starting
19:00:25 (3623637): wrapper: running run_atlas (--nthreads 4)
[2025-02-25 19:00:25] Arguments: --nthreads 4
[2025-02-25 19:00:25] Threads: 4
[2025-02-25 19:00:25] Checking for CVMFS
[2025-02-25 19:00:25] No cvmfs_config command found, will try listing directly
[2025-02-25 19:00:25] CVMFS is ok
[2025-02-25 19:00:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 19:00:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 19:00:25] Further information can be found at the LHC@home message board.
[2025-02-25 19:00:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 19:00:25] Checking for apptainer binary...
[2025-02-25 19:00:25] which: no apptainer in ((null))
[2025-02-25 19:00:25] apptainer is not installed, using version from CVMFS
[2025-02-25 19:00:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 19:00:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-02-25 19:00:25] apptainer works
[2025-02-25 19:00:25] Set ATHENA_PROC_NUMBER=4
[2025-02-25 19:00:25] Set ATHENA_CORE_NUMBER=4
[2025-02-25 19:00:25] Starting ATLAS job with PandaID=6522547391
[2025-02-25 19:00:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 00:03:47]  *** The last 200 lines of the pilot log: ***
[2025-02-26 00:03:47] 2025-02-25 23:03:03,064 | INFO     | current chi2=3.794815381779211 (change=0.005836733449015667 %)
[2025-02-26 00:03:47] 2025-02-25 23:03:03,064 | INFO     | right removable region: 291
[2025-02-26 00:03:47] 2025-02-25 23:03:03,064 | INFO     | model: linear, x: [1740506771.0, 1740506832.0, 1740506893.0, 1740506954.0, 1740507015.0, 1740507076.0, 1740507137.0, 1740507198.0, 1740507259.0, 1740507320.0, 1740
[2025-02-26 00:03:47] 2025-02-25 23:03:03,067 | INFO     | sum of square deviations: 7720081493.0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,069 | INFO     | sum of deviations: 75252058544.00002
[2025-02-26 00:03:47] 2025-02-25 23:03:03,069 | INFO     | mean x: 1740515646.5
[2025-02-26 00:03:47] 2025-02-25 23:03:03,069 | INFO     | mean y: 2348121.095890411
[2025-02-26 00:03:47] 2025-02-25 23:03:03,069 | INFO     | -- intersect: -16963455341.720749
[2025-02-26 00:03:47] 2025-02-25 23:03:03,069 | INFO     | intersect: -16963455341.720749
[2025-02-26 00:03:47] 2025-02-25 23:03:03,069 | INFO     | chi2: 1.395113890890888
[2025-02-26 00:03:47] 2025-02-25 23:03:03,070 | INFO     | current chi2=1.395113890890888 (change=63.23846296950285 %)
[2025-02-26 00:03:47] 2025-02-25 23:03:03,070 | INFO     | model: linear, x: [1740507076.0, 1740507137.0, 1740507198.0, 1740507259.0, 1740507320.0, 1740507381.0, 1740507442.0, 1740507503.0, 1740507564.0, 1740507625.0, 1740
[2025-02-26 00:03:47] 2025-02-25 23:03:03,070 | INFO     | sum of square deviations: 7330250928.0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,072 | INFO     | sum of deviations: 21233188659.999985
[2025-02-26 00:03:47] 2025-02-25 23:03:03,072 | INFO     | mean x: 1740515799.0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,072 | INFO     | mean y: 2369253.6027874565
[2025-02-26 00:03:47] 2025-02-25 23:03:03,072 | INFO     | -- intersect: -5039299945.566217
[2025-02-26 00:03:47] 2025-02-25 23:03:03,072 | INFO     | intersect: -5039299945.566217
[2025-02-26 00:03:47] 2025-02-25 23:03:03,073 | INFO     | chi2: 0.06448614194666445
[2025-02-26 00:03:47] 2025-02-25 23:03:03,073 | INFO     | current chi2=0.06448614194666445 (change=95.37771486846245 %)
[2025-02-26 00:03:47] 2025-02-25 23:03:03,073 | INFO     | model: linear, x: [1740507381.0, 1740507442.0, 1740507503.0, 1740507564.0, 1740507625.0, 1740507686.0, 1740507747.0, 1740507808.0, 1740507869.0, 1740507930.0, 1740
[2025-02-26 00:03:47] 2025-02-25 23:03:03,073 | INFO     | sum of square deviations: 6953769450.5
[2025-02-26 00:03:47] 2025-02-25 23:03:03,075 | INFO     | sum of deviations: 11080851208.5
[2025-02-26 00:03:47] 2025-02-25 23:03:03,075 | INFO     | mean x: 1740515951.5
[2025-02-26 00:03:47] 2025-02-25 23:03:03,075 | INFO     | mean y: 2373351.9468085105
[2025-02-26 00:03:47] 2025-02-25 23:03:03,075 | INFO     | -- intersect: -2771143719.891911
[2025-02-26 00:03:47] 2025-02-25 23:03:03,075 | INFO     | intersect: -2771143719.891911
[2025-02-26 00:03:47] 2025-02-25 23:03:03,076 | INFO     | chi2: 0.0007978312336369034
[2025-02-26 00:03:47] 2025-02-25 23:03:03,076 | INFO     | current chi2=0.0007978312336369034 (change=98.76278653125694 %)
[2025-02-26 00:03:47] 2025-02-25 23:03:03,076 | INFO     | model: linear, x: [1740507686.0, 1740507747.0, 1740507808.0, 1740507869.0, 1740507930.0, 1740507991.0, 1740508052.0, 1740508113.0, 1740508174.0, 1740508235.0, 1740
[2025-02-26 00:03:47] 2025-02-25 23:03:03,076 | INFO     | sum of square deviations: 6590404498.0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,078 | INFO     | sum of deviations: 10113664396.999998
[2025-02-26 00:03:47] 2025-02-25 23:03:03,078 | INFO     | mean x: 1740516104.0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,078 | INFO     | mean y: 2373755.368231047
[2025-02-26 00:03:47] 2025-02-25 23:03:03,078 | INFO     | -- intersect: -2668630089.5053205
[2025-02-26 00:03:47] 2025-02-25 23:03:03,079 | INFO     | intersect: -2668630089.5053205
[2025-02-26 00:03:47] 2025-02-25 23:03:03,079 | INFO     | chi2: 0.000537340109780165
[2025-02-26 00:03:47] 2025-02-25 23:03:03,079 | INFO     | current chi2=0.000537340109780165 (change=32.649902996313266 %)
[2025-02-26 00:03:47] 2025-02-25 23:03:03,079 | INFO     | model: linear, x: [1740507991.0, 1740508052.0, 1740508113.0, 1740508174.0, 1740508235.0, 1740508296.0, 1740508357.0, 1740508418.0, 1740508479.0, 1740508540.0, 1740
[2025-02-26 00:03:47] 2025-02-25 23:03:03,079 | INFO     | sum of square deviations: 6239923508.0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,081 | INFO     | sum of deviations: 9783260001.5
[2025-02-26 00:03:47] 2025-02-25 23:03:03,081 | INFO     | mean x: 1740516256.5
[2025-02-26 00:03:47] 2025-02-25 23:03:03,081 | INFO     | mean y: 2373899.099264706
[2025-02-26 00:03:47] 2025-02-25 23:03:03,082 | INFO     | -- intersect: -2726493378.2553415
[2025-02-26 00:03:47] 2025-02-25 23:03:03,082 | INFO     | intersect: -2726493378.2553415
[2025-02-26 00:03:47] 2025-02-25 23:03:03,082 | INFO     | chi2: 0.0005138825686795055
[2025-02-26 00:03:47] 2025-02-25 23:03:03,082 | INFO     | current chi2=0.0005138825686795055 (change=4.365492296909742 %)
[2025-02-26 00:03:47] 2025-02-25 23:03:03,082 | INFO     | left removable region: 50
[2025-02-26 00:03:47] 2025-02-25 23:03:03,082 | INFO     | model: linear, x: [1740509516.0, 1740509577.0, 1740509638.0, 1740509699.0, 1740509760.0, 1740509821.0, 1740509882.0, 1740509943.0, 1740510004.0, 1740510065.0, 1740
[2025-02-26 00:03:47] 2025-02-25 23:03:03,085 | INFO     | sum of square deviations: 4340323240.0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,086 | INFO     | sum of deviations: 7028784413.999999
[2025-02-26 00:03:47] 2025-02-25 23:03:03,086 | INFO     | mean x: 1740516836.0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,086 | INFO     | mean y: 2374803.0456431536
[2025-02-26 00:03:47] 2025-02-25 23:03:03,087 | INFO     | -- intersect: -2816244210.4961667
[2025-02-26 00:03:47] 2025-02-25 23:03:03,087 | INFO     | intersect: -2816244210.4961667
[2025-02-26 00:03:47] 2025-02-25 23:03:03,087 | INFO     | chi2: 0.0004388588304788154
[2025-02-26 00:03:47] 2025-02-25 23:03:03,087 | INFO     | -- intersect: -2816244210.4961667
[2025-02-26 00:03:47] 2025-02-25 23:03:03,087 | INFO     | current memory leak: 1.62 B/s (using 241 data points, chi2=0.00)
[2025-02-26 00:03:47] 2025-02-25 23:03:03,088 | INFO     | ..............................
[2025-02-26 00:03:47] 2025-02-25 23:03:03,088 | INFO     | . Timing measurements:
[2025-02-26 00:03:47] 2025-02-25 23:03:03,088 | INFO     | . get job = 0 s
[2025-02-26 00:03:47] 2025-02-25 23:03:03,088 | INFO     | . initial setup = 1 s
[2025-02-26 00:03:47] 2025-02-25 23:03:03,088 | INFO     | . payload setup = 7 s
[2025-02-26 00:03:47] 2025-02-25 23:03:03,088 | INFO     | . stage-in = 0 s
[2025-02-26 00:03:47] 2025-02-25 23:03:03,088 | INFO     | . payload execution = 18108 s
[2025-02-26 00:03:47] 2025-02-25 23:03:03,088 | INFO     | . stage-out = 1 s
[2025-02-26 00:03:47] 2025-02-25 23:03:03,089 | INFO     | . log creation = 0 s
[2025-02-26 00:03:47] 2025-02-25 23:03:03,089 | INFO     | ..............................
[2025-02-26 00:03:47] 2025-02-25 23:03:03,303 | INFO     | 
[2025-02-26 00:03:47] 2025-02-25 23:03:03,304 | INFO     | job summary report
[2025-02-26 00:03:47] 2025-02-25 23:03:03,304 | INFO     | --------------------------------------------------
[2025-02-26 00:03:47] 2025-02-25 23:03:03,304 | INFO     | PanDA job id: 6522547391
[2025-02-26 00:03:47] 2025-02-25 23:03:03,304 | INFO     | task id: 43078919
[2025-02-26 00:03:47] 2025-02-25 23:03:03,304 | INFO     | errors: (none)
[2025-02-26 00:03:47] 2025-02-25 23:03:03,304 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 00:03:47] 2025-02-25 23:03:03,304 | INFO     | pilot state: finished 
[2025-02-26 00:03:47] 2025-02-25 23:03:03,304 | INFO     | transexitcode: 0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,304 | INFO     | exeerrorcode: 0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,304 | INFO     | exeerrordiag: 
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | exitcode: 0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | exitmsg: OK
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | cpuconsumptiontime: 69660 s
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | nevents: 400
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | neventsw: 0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | pid: 3635015
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | pgrp: 3635015
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | corecount: 4
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | event service: False
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | sizes: {0: 2376788, 1: 2376987, 6: 2377193, 11: 2377221, 18118: 2409265, 18121: 2419311, 18130: 2419425}
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | --------------------------------------------------
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | 
[2025-02-26 00:03:47] 2025-02-25 23:03:03,305 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2025-02-26 00:03:47] 2025-02-25 23:03:03,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,334 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,334 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,336 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,336 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,336 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 00:03:47] 2025-02-25 23:03:03,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,336 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 00:03:47] 2025-02-25 23:03:03,336 | INFO     | job 6522547391 has completed (purged errors)
[2025-02-26 00:03:47] 2025-02-25 23:03:03,336 | INFO     | overall cleanup function is called
[2025-02-26 00:03:47] 2025-02-25 23:03:04,345 | INFO     | --- collectZombieJob: --- 10, [3635015]
[2025-02-26 00:03:47] 2025-02-25 23:03:04,346 | INFO     | zombie collector waiting for pid 3635015
[2025-02-26 00:03:47] 2025-02-25 23:03:04,346 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 00:03:47] 2025-02-25 23:03:04,346 | INFO     | collected zombie processes
[2025-02-26 00:03:47] 2025-02-25 23:03:04,346 | INFO     | will attempt to kill all subprocesses of pid=3635015
[2025-02-26 00:03:47] 2025-02-25 23:03:04,688 | INFO     | process IDs to be killed: [3635015] (in reverse order)
[2025-02-26 00:03:47] 2025-02-25 23:03:04,924 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 00:03:47] 2025-02-25 23:03:04,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 00:03:47] 2025-02-25 23:03:04,950 | INFO     | did not find any defunct processes belonging to 3635015
[2025-02-26 00:03:47] 2025-02-25 23:03:04,981 | INFO     | did not find any defunct processes belonging to 3635015
[2025-02-26 00:03:47] 2025-02-25 23:03:04,981 | INFO     | ready for new job
[2025-02-26 00:03:47] 2025-02-25 23:03:04,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 00:03:47] 2025-02-25 23:03:04,984 | INFO     | **************************************
[2025-02-26 00:03:47] 2025-02-25 23:03:04,985 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 00:03:47] 2025-02-25 23:03:04,985 | INFO     | **************************************
[2025-02-26 00:03:47] 2025-02-25 23:03:04,985 | INFO     | 
[2025-02-26 00:03:47] 2025-02-25 23:03:04,992 | INFO     | architecture information:
[2025-02-26 00:03:47] 2025-02-25 23:03:04,992 | INFO     | executing command: cat /etc/os-release
[2025-02-26 00:03:47] 2025-02-25 23:03:05,014 | INFO     | cat /etc/os-release:
[2025-02-26 00:03:47] NAME="CentOS Linux"
[2025-02-26 00:03:47] VERSION="7 (Core)"
[2025-02-26 00:03:47] ID="centos"
[2025-02-26 00:03:47] ID_LIKE="rhel fedora"
[2025-02-26 00:03:47] VERSION_ID="7"
[2025-02-26 00:03:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 00:03:47] ANSI_COLOR="0;31"
[2025-02-26 00:03:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 00:03:47] HOME_URL="https://www.centos.org/"
[2025-02-26 00:03:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 00:03:47] 
[2025-02-26 00:03:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 00:03:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 00:03:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 00:03:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 00:03:47] 
[2025-02-26 00:03:47] 2025-02-25 23:03:05,014 | INFO     | **************************************
[2025-02-26 00:03:47] 2025-02-25 23:03:05,517 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2025-02-26 00:03:47] 2025-02-25 23:03:05,540 | INFO     | sufficient remaining disk space (3214266073088 B)
[2025-02-26 00:03:47] 2025-02-25 23:03:05,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 00:03:47] 2025-02-25 23:03:05,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 00:03:47] 2025-02-25 23:03:05,541 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 00:03:47] 2025-02-25 23:03:05,541 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 00:03:47] 2025-02-25 23:03:05,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 00:03:47] 2025-02-25 23:03:05,542 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 00:03:47] 2025-02-25 23:03:05,543 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 00:03:47] 2025-02-25 23:03:05,543 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 00:03:47] 2025-02-25 23:03:05,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 00:03:47] 2025-02-25 23:03:05,888 | INFO     | aborting loop
[2025-02-26 00:03:47] 2025-02-25 23:03:05,948 | INFO     | all job control threads have been joined
[2025-02-26 00:03:47] 2025-02-25 23:03:06,172 | INFO     | all payload control threads have been joined
[2025-02-26 00:03:47] 2025-02-25 23:03:06,545 | INFO     | [job] retrieve thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:06,629 | INFO     | all data control threads have been joined
[2025-02-26 00:03:47] 2025-02-25 23:03:06,892 | INFO     | [job] job monitor thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:06,954 | INFO     | [job] control thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:07,095 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:07,177 | INFO     | [payload] control thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:07,434 | INFO     | [payload] validate_post thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:07,547 | INFO     | [data] copytool_out thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:07,635 | INFO     | [data] control thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:07,695 | INFO     | [payload] failed_post thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:07,782 | INFO     | [job] validate thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:07,933 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:07,982 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:07,987 | INFO     | [data] copytool_in thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:08,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 00:03:47] 2025-02-25 23:03:09,191 | INFO     | [job] queue monitor thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:09,548 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:16,508 | INFO     | job.realtimelogging is not enabled
[2025-02-26 00:03:47] 2025-02-25 23:03:17,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 00:03:47] 2025-02-25 23:03:18,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23452241979200)>', '<ExcThread(monitor, started 23451393849088)>']
[2025-02-26 00:03:47] 2025-02-25 23:03:18,603 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 00:03:47] 2025-02-25 23:03:18,603 | INFO     | [monitor] control thread has ended
[2025-02-26 00:03:47] 2025-02-25 23:03:23,238 | INFO     | all workflow threads have been joined
[2025-02-26 00:03:47] 2025-02-25 23:03:23,238 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 00:03:47] 2025-02-25 23:03:23,239 | INFO     | traces error code: 0
[2025-02-26 00:03:47] 2025-02-25 23:03:23,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 00:03:47] 2025-02-25 23:03:23,397 [wrapper] ==== pilot stdout END ====
[2025-02-26 00:03:47] 2025-02-25 23:03:23,401 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 00:03:47] 2025-02-25 23:03:23,404 [wrapper] pilotpid: 3627581
[2025-02-26 00:03:47] 2025-02-25 23:03:23,408 [wrapper] Pilot exit status: 0
[2025-02-26 00:03:47] 2025-02-25 23:03:23,421 [wrapper] pandaids: 6522547391
[2025-02-26 00:03:47] 2025-02-25 23:03:23,563 [wrapper] cleanup supervisor_pilot  482417 3627582
[2025-02-26 00:03:47] 2025-02-25 23:03:23,566 [wrapper] Test setup, not cleaning
[2025-02-26 00:03:47] 2025-02-25 23:03:23,573 [wrapper] apfmon messages muted
[2025-02-26 00:03:47] 2025-02-25 23:03:23,576 [wrapper] ==== wrapper stdout END ====
[2025-02-26 00:03:47] 2025-02-25 23:03:23,579 [wrapper] ==== wrapper stderr END ====
[2025-02-26 00:03:47]  *** Error codes and diagnostics ***
[2025-02-26 00:03:47]     "exeErrorCode": 0,
[2025-02-26 00:03:47]     "exeErrorDiag": "",
[2025-02-26 00:03:47]     "pilotErrorCode": 0,
[2025-02-26 00:03:47]     "pilotErrorDiag": "",
[2025-02-26 00:03:47]  *** Listing of results directory ***
[2025-02-26 00:03:47] total 657948
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc    491065 Feb 22 00:14 pilot3.tar.gz
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc      5118 Feb 22 00:33 queuedata.json
[2025-02-26 00:03:47] -rwx------ 1 boinc boinc     35865 Feb 22 00:35 runpilot2-wrapper.sh
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc       100 Feb 25 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 00:03:47] -rwxr-xr-x 1 boinc boinc      7986 Feb 25 19:00 run_atlas
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc       105 Feb 25 19:00 job.xml
[2025-02-26 00:03:47] -rw-r--r-- 2 boinc boinc 343625815 Feb 25 19:00 EVNT.43078917._002602.pool.root.1
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc      6672 Feb 25 19:00 init_data.xml
[2025-02-26 00:03:47] drwxrwx--x 2 boinc boinc      4096 Feb 25 19:00 shared
[2025-02-26 00:03:47] -rw-r--r-- 2 boinc boinc    503556 Feb 25 19:00 input.tar.gz
[2025-02-26 00:03:47] -rw-r--r-- 2 boinc boinc     17569 Feb 25 19:00 start_atlas.sh
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc         0 Feb 25 19:00 boinc_lockfile
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc      2546 Feb 25 19:00 pandaJob.out
[2025-02-26 00:03:47] -rw------- 1 boinc boinc       424 Feb 25 19:00 setup.sh.local
[2025-02-26 00:03:47] -rw------- 1 boinc boinc    988274 Feb 25 19:00 agis_schedconf.cvmfs.json
[2025-02-26 00:03:47] drwx------ 4 boinc boinc      4096 Feb 25 19:00 pilot3
[2025-02-26 00:03:47] -rw------- 1 boinc boinc        95 Feb 26 00:02 pilot_heartbeat.json
[2025-02-26 00:03:47] -rw------- 1 boinc boinc 321504834 Feb 26 00:02 HITS.43078919._085930.pool.root.1
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc       530 Feb 26 00:02 boinc_task_state.xml
[2025-02-26 00:03:47] -rw------- 1 boinc boinc      1032 Feb 26 00:02 memory_monitor_summary.json
[2025-02-26 00:03:47] -rw------- 1 boinc boinc   1573632 Feb 26 00:02 agis_ddmendpoints.agis.ALL.json
[2025-02-26 00:03:47] -rw------- 1 boinc boinc    413609 Feb 26 00:02 log.43078919._085930.job.log.tgz.1
[2025-02-26 00:03:47] -rw------- 1 boinc boinc      7706 Feb 26 00:03 heartbeat.json
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc        27 Feb 26 00:03 wrapper_checkpoint.txt
[2025-02-26 00:03:47] -rw------- 1 boinc boinc      4421 Feb 26 00:03 pilotlog.txt
[2025-02-26 00:03:47] -rw------- 1 boinc boinc   1993964 Feb 26 00:03 log.43078919._085930.job.log.1
[2025-02-26 00:03:47] -rw------- 1 boinc boinc       357 Feb 26 00:03 output.list
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc       620 Feb 26 00:03 runtime_log
[2025-02-26 00:03:47] -rw------- 1 boinc boinc   2426880 Feb 26 00:03 result.tar.gz
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc     11424 Feb 26 00:03 runtime_log.err
[2025-02-26 00:03:47] -rw------- 1 boinc boinc       666 Feb 26 00:03 njkKDmbjr56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmX9sKDm323PKn.diag
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc      8192 Feb 26 00:03 boinc_mmap_file
[2025-02-26 00:03:47] -rw-r--r-- 1 boinc boinc     12344 Feb 26 00:03 stderr.txt
[2025-02-26 00:03:47] HITS file was successfully produced:
[2025-02-26 00:03:47] -rw------- 1 boinc boinc 321504834 Feb 26 00:02 shared/HITS.pool.root.1
[2025-02-26 00:03:47]  *** Contents of shared directory: ***
[2025-02-26 00:03:47] total 652440
[2025-02-26 00:03:47] -rw-r--r-- 2 boinc boinc 343625815 Feb 25 19:00 ATLAS.root_0
[2025-02-26 00:03:47] -rw-r--r-- 2 boinc boinc    503556 Feb 25 19:00 input.tar.gz
[2025-02-26 00:03:47] -rw-r--r-- 2 boinc boinc     17569 Feb 25 19:00 start_atlas.sh
[2025-02-26 00:03:47] -rw------- 1 boinc boinc 321504834 Feb 26 00:02 HITS.pool.root.1
[2025-02-26 00:03:47] -rw------- 1 boinc boinc   2426880 Feb 26 00:03 result.tar.gz
00:03:48 (3623637): run_atlas exited; CPU time 69444.163815
00:03:48 (3623637): called boinc_finish(0)

</stderr_txt>
]]>

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