Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:33 (315676): wrapper (7.7.26015): starting
07:46:33 (315676): wrapper: running run_atlas (--nthreads 4)
[2025-02-25 07:46:33] Arguments: --nthreads 4
[2025-02-25 07:46:33] Threads: 4
[2025-02-25 07:46:33] Checking for CVMFS
[2025-02-25 07:46:33] No cvmfs_config command found, will try listing directly
[2025-02-25 07:46:33] CVMFS is ok
[2025-02-25 07:46:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 07:46:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 07:46:33] Further information can be found at the LHC@home message board.
[2025-02-25 07:46:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 07:46:33] Checking for apptainer binary...
[2025-02-25 07:46:33] which: no apptainer in ((null))
[2025-02-25 07:46:33] apptainer is not installed, using version from CVMFS
[2025-02-25 07:46:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 07:46:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-02-25 07:46:33] apptainer works
[2025-02-25 07:46:33] Set ATHENA_PROC_NUMBER=4
[2025-02-25 07:46:33] Set ATHENA_CORE_NUMBER=4
[2025-02-25 07:46:34] Starting ATLAS job with PandaID=6522756263
[2025-02-25 07:46:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 13:42:43]  *** The last 200 lines of the pilot log: ***
[2025-02-25 13:42:43] 2025-02-25 12:41:51,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 13:42:43] 2025-02-25 12:41:51,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 13:42:43] 2025-02-25 12:41:51,053 | INFO     | fitting pss+swap vs Time
[2025-02-25 13:42:43] 2025-02-25 12:41:51,054 | INFO     | model: linear, x: [1740466042.0, 1740466103.0, 1740466164.0, 1740466225.0, 1740466286.0, 1740466347.0, 1740466408.0, 1740466469.0, 1740466530.0, 1740466591.0, 1740
[2025-02-25 13:42:43] 2025-02-25 12:41:51,054 | INFO     | sum of square deviations: 13181084350.0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,057 | INFO     | sum of deviations: 151023598212.0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,058 | INFO     | mean x: 1740476656.0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,058 | INFO     | mean y: 2320623.4498567334
[2025-02-25 13:42:43] 2025-02-25 12:41:51,058 | INFO     | -- intersect: -19939365524.178
[2025-02-25 13:42:43] 2025-02-25 12:41:51,058 | INFO     | intersect: -19939365524.178
[2025-02-25 13:42:43] 2025-02-25 12:41:51,058 | INFO     | chi2: 4.767169027222863
[2025-02-25 13:42:43] 2025-02-25 12:41:51,059 | INFO     | model: linear, x: [1740466042.0, 1740466103.0, 1740466164.0, 1740466225.0, 1740466286.0, 1740466347.0, 1740466408.0, 1740466469.0, 1740466530.0, 1740466591.0, 1740
[2025-02-25 13:42:43] 2025-02-25 12:41:51,059 | INFO     | sum of square deviations: 12622636670.0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,062 | INFO     | sum of deviations: 169553198186.0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,062 | INFO     | mean x: 1740476503.5
[2025-02-25 13:42:43] 2025-02-25 12:41:51,062 | INFO     | mean y: 2325617.1627906975
[2025-02-25 13:42:43] 2025-02-25 12:41:51,062 | INFO     | -- intersect: -23376574152.43755
[2025-02-25 13:42:43] 2025-02-25 12:41:51,062 | INFO     | intersect: -23376574152.43755
[2025-02-25 13:42:43] 2025-02-25 12:41:51,063 | INFO     | chi2: 4.074981503269361
[2025-02-25 13:42:43] 2025-02-25 12:41:51,063 | INFO     | current chi2=4.074981503269361 (change=14.519886330876327 %)
[2025-02-25 13:42:43] 2025-02-25 12:41:51,063 | INFO     | right removable region: 343
[2025-02-25 13:42:43] 2025-02-25 12:41:51,063 | INFO     | model: linear, x: [1740466347.0, 1740466408.0, 1740466469.0, 1740466530.0, 1740466591.0, 1740466652.0, 1740466713.0, 1740466774.0, 1740466835.0, 1740466896.0, 1740
[2025-02-25 13:42:43] 2025-02-25 12:41:51,065 | INFO     | sum of square deviations: 12622636670.0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,068 | INFO     | sum of deviations: 67827095874.5
[2025-02-25 13:42:43] 2025-02-25 12:41:51,068 | INFO     | mean x: 1740476808.5
[2025-02-25 13:42:43] 2025-02-25 12:41:51,068 | INFO     | mean y: 2343303.4215116277
[2025-02-25 13:42:43] 2025-02-25 12:41:51,068 | INFO     | -- intersect: -9350020267.1821
[2025-02-25 13:42:43] 2025-02-25 12:41:51,068 | INFO     | intersect: -9350020267.1821
[2025-02-25 13:42:43] 2025-02-25 12:41:51,069 | INFO     | chi2: 2.264617486145873
[2025-02-25 13:42:43] 2025-02-25 12:41:51,069 | INFO     | current chi2=2.264617486145873 (change=52.49554875831334 %)
[2025-02-25 13:42:43] 2025-02-25 12:41:51,069 | INFO     | model: linear, x: [1740466652.0, 1740466713.0, 1740466774.0, 1740466835.0, 1740466896.0, 1740466957.0, 1740467018.0, 1740467079.0, 1740467140.0, 1740467201.0, 1740
[2025-02-25 13:42:43] 2025-02-25 12:41:51,069 | INFO     | sum of square deviations: 12080189290.0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,072 | INFO     | sum of deviations: 1942000269.9999924
[2025-02-25 13:42:43] 2025-02-25 12:41:51,072 | INFO     | mean x: 1740476961.0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,072 | INFO     | mean y: 2361826.297935103
[2025-02-25 13:42:43] 2025-02-25 12:41:51,073 | INFO     | -- intersect: -277435670.83141375
[2025-02-25 13:42:43] 2025-02-25 12:41:51,073 | INFO     | intersect: -277435670.83141375
[2025-02-25 13:42:43] 2025-02-25 12:41:51,073 | INFO     | chi2: 0.8234860234275734
[2025-02-25 13:42:43] 2025-02-25 12:41:51,073 | INFO     | current chi2=0.8234860234275734 (change=63.63686015561706 %)
[2025-02-25 13:42:43] 2025-02-25 12:41:51,073 | INFO     | model: linear, x: [1740466957.0, 1740467018.0, 1740467079.0, 1740467140.0, 1740467201.0, 1740467262.0, 1740467323.0, 1740467384.0, 1740467445.0, 1740467506.0, 1740
[2025-02-25 13:42:43] 2025-02-25 12:41:51,074 | INFO     | sum of square deviations: 11553509647.5
[2025-02-25 13:42:43] 2025-02-25 12:41:51,076 | INFO     | sum of deviations: -12679839481.0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,077 | INFO     | mean x: 1740477113.5
[2025-02-25 13:42:43] 2025-02-25 12:41:51,077 | INFO     | mean y: 2366041.7125748503
[2025-02-25 13:42:43] 2025-02-25 12:41:51,077 | INFO     | -- intersect: 1912518981.6298063
[2025-02-25 13:42:43] 2025-02-25 12:41:51,077 | INFO     | intersect: 1912518981.6298063
[2025-02-25 13:42:43] 2025-02-25 12:41:51,077 | INFO     | chi2: 0.7276793305173526
[2025-02-25 13:42:43] 2025-02-25 12:41:51,077 | INFO     | current chi2=0.7276793305173526 (change=11.63428281532299 %)
[2025-02-25 13:42:43] 2025-02-25 12:41:51,077 | INFO     | left removable region: 30
[2025-02-25 13:42:43] 2025-02-25 12:41:51,078 | INFO     | model: linear, x: [1740467872.0, 1740467933.0, 1740467994.0, 1740468055.0, 1740468116.0, 1740468177.0, 1740468238.0, 1740468299.0, 1740468360.0, 1740468421.0, 1740
[2025-02-25 13:42:43] 2025-02-25 12:41:51,078 | INFO     | sum of square deviations: 9508390372.0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,080 | INFO     | sum of deviations: 3084969104.0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,080 | INFO     | mean x: 1740477388.0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,081 | INFO     | mean y: 2373232.2428115015
[2025-02-25 13:42:43] 2025-02-25 12:41:51,081 | INFO     | -- intersect: -562319503.1335163
[2025-02-25 13:42:43] 2025-02-25 12:41:51,081 | INFO     | intersect: -562319503.1335163
[2025-02-25 13:42:43] 2025-02-25 12:41:51,081 | INFO     | chi2: 0.003192453261126915
[2025-02-25 13:42:43] 2025-02-25 12:41:51,081 | INFO     | -- intersect: -562319503.1335163
[2025-02-25 13:42:43] 2025-02-25 12:41:51,081 | INFO     | current memory leak: 0.32 B/s (using 313 data points, chi2=0.00)
[2025-02-25 13:42:43] 2025-02-25 12:41:51,082 | INFO     | ..............................
[2025-02-25 13:42:43] 2025-02-25 12:41:51,082 | INFO     | . Timing measurements:
[2025-02-25 13:42:43] 2025-02-25 12:41:51,082 | INFO     | . get job = 0 s
[2025-02-25 13:42:43] 2025-02-25 12:41:51,082 | INFO     | . initial setup = 1 s
[2025-02-25 13:42:43] 2025-02-25 12:41:51,083 | INFO     | . payload setup = 8 s
[2025-02-25 13:42:43] 2025-02-25 12:41:51,083 | INFO     | . stage-in = 0 s
[2025-02-25 13:42:43] 2025-02-25 12:41:51,083 | INFO     | . payload execution = 21260 s
[2025-02-25 13:42:43] 2025-02-25 12:41:51,083 | INFO     | . stage-out = 1 s
[2025-02-25 13:42:43] 2025-02-25 12:41:51,083 | INFO     | . log creation = 0 s
[2025-02-25 13:42:43] 2025-02-25 12:41:51,083 | INFO     | ..............................
[2025-02-25 13:42:43] 2025-02-25 12:41:51,384 | INFO     | 
[2025-02-25 13:42:43] 2025-02-25 12:41:51,384 | INFO     | job summary report
[2025-02-25 13:42:43] 2025-02-25 12:41:51,384 | INFO     | --------------------------------------------------
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | PanDA job id: 6522756263
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | task id: 43205075
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | errors: (none)
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | pilot state: finished 
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | transexitcode: 0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | exeerrorcode: 0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | exeerrordiag: 
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | exitcode: 0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | exitmsg: OK
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | cpuconsumptiontime: 80906 s
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | nevents: 400
[2025-02-25 13:42:43] 2025-02-25 12:41:51,385 | INFO     | neventsw: 0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,386 | INFO     | pid: 366565
[2025-02-25 13:42:43] 2025-02-25 12:41:51,386 | INFO     | pgrp: 366565
[2025-02-25 13:42:43] 2025-02-25 12:41:51,386 | INFO     | corecount: 4
[2025-02-25 13:42:43] 2025-02-25 12:41:51,386 | INFO     | event service: False
[2025-02-25 13:42:43] 2025-02-25 12:41:51,386 | INFO     | sizes: {0: 2382488, 1: 2383356, 8: 2383562, 12: 2383590, 21272: 2416770, 21274: 2426632, 21277: 2426816, 21285: 2426986}
[2025-02-25 13:42:43] 2025-02-25 12:41:51,386 | INFO     | --------------------------------------------------
[2025-02-25 13:42:43] 2025-02-25 12:41:51,386 | INFO     | 
[2025-02-25 13:42:43] 2025-02-25 12:41:51,386 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-02-25 13:42:43] 2025-02-25 12:41:51,418 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,419 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,419 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,419 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,419 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,419 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,419 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,419 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,420 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,420 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 13:42:43] 2025-02-25 12:41:51,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,420 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 13:42:43] 2025-02-25 12:41:51,421 | INFO     | job 6522756263 has completed (purged errors)
[2025-02-25 13:42:43] 2025-02-25 12:41:51,421 | INFO     | overall cleanup function is called
[2025-02-25 13:42:43] 2025-02-25 12:41:52,430 | INFO     | --- collectZombieJob: --- 10, [366565]
[2025-02-25 13:42:43] 2025-02-25 12:41:52,431 | INFO     | zombie collector waiting for pid 366565
[2025-02-25 13:42:43] 2025-02-25 12:41:52,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 13:42:43] 2025-02-25 12:41:52,431 | INFO     | collected zombie processes
[2025-02-25 13:42:43] 2025-02-25 12:41:52,431 | INFO     | will attempt to kill all subprocesses of pid=366565
[2025-02-25 13:42:43] 2025-02-25 12:41:52,776 | INFO     | process IDs to be killed: [366565] (in reverse order)
[2025-02-25 13:42:43] 2025-02-25 12:41:53,021 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 13:42:43] 2025-02-25 12:41:53,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 13:42:43] 2025-02-25 12:41:53,045 | INFO     | did not find any defunct processes belonging to 366565
[2025-02-25 13:42:43] 2025-02-25 12:41:53,066 | INFO     | did not find any defunct processes belonging to 366565
[2025-02-25 13:42:43] 2025-02-25 12:41:53,066 | INFO     | ready for new job
[2025-02-25 13:42:43] 2025-02-25 12:41:53,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 13:42:43] 2025-02-25 12:41:53,069 | INFO     | **************************************
[2025-02-25 13:42:43] 2025-02-25 12:41:53,069 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 13:42:43] 2025-02-25 12:41:53,069 | INFO     | **************************************
[2025-02-25 13:42:43] 2025-02-25 12:41:53,069 | INFO     | 
[2025-02-25 13:42:43] 2025-02-25 12:41:53,078 | INFO     | architecture information:
[2025-02-25 13:42:43] 2025-02-25 12:41:53,078 | INFO     | executing command: cat /etc/os-release
[2025-02-25 13:42:43] 2025-02-25 12:41:53,101 | INFO     | cat /etc/os-release:
[2025-02-25 13:42:43] NAME="CentOS Linux"
[2025-02-25 13:42:43] VERSION="7 (Core)"
[2025-02-25 13:42:43] ID="centos"
[2025-02-25 13:42:43] ID_LIKE="rhel fedora"
[2025-02-25 13:42:43] VERSION_ID="7"
[2025-02-25 13:42:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 13:42:43] ANSI_COLOR="0;31"
[2025-02-25 13:42:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 13:42:43] HOME_URL="https://www.centos.org/"
[2025-02-25 13:42:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 13:42:43] 
[2025-02-25 13:42:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 13:42:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 13:42:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 13:42:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 13:42:43] 
[2025-02-25 13:42:43] 2025-02-25 12:41:53,102 | INFO     | **************************************
[2025-02-25 13:42:43] 2025-02-25 12:41:53,605 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-02-25 13:42:43] 2025-02-25 12:41:53,633 | INFO     | sufficient remaining disk space (3228201648128 B)
[2025-02-25 13:42:43] 2025-02-25 12:41:53,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 13:42:43] 2025-02-25 12:41:53,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 13:42:43] 2025-02-25 12:41:53,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 13:42:43] 2025-02-25 12:41:53,634 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 13:42:43] 2025-02-25 12:41:53,635 | INFO     | aborting loop
[2025-02-25 13:42:43] 2025-02-25 12:41:53,727 | INFO     | all data control threads have been joined
[2025-02-25 13:42:43] 2025-02-25 12:41:53,739 | INFO     | all job control threads have been joined
[2025-02-25 13:42:43] 2025-02-25 12:41:54,006 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 13:42:43] 2025-02-25 12:41:54,584 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 13:42:43] 2025-02-25 12:41:54,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 13:42:43] 2025-02-25 12:41:54,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 13:42:43] 2025-02-25 12:41:54,639 | INFO     | [job] retrieve thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:54,640 | INFO     | [job] job monitor thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:54,733 | INFO     | [data] control thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:54,745 | INFO     | [job] control thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:54,758 | INFO     | all payload control threads have been joined
[2025-02-25 13:42:43] 2025-02-25 12:41:55,198 | INFO     | [payload] failed_post thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:55,376 | INFO     | [payload] validate_post thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:55,490 | INFO     | [job] validate thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:55,556 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:55,640 | INFO     | [data] copytool_out thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:55,676 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:55,763 | INFO     | [payload] control thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:55,791 | INFO     | [data] copytool_in thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:55,914 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:56,183 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 13:42:43] 2025-02-25 12:41:57,188 | INFO     | [job] queue monitor thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:41:58,011 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:42:04,643 | INFO     | job.realtimelogging is not enabled
[2025-02-25 13:42:43] 2025-02-25 12:42:05,648 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 13:42:43] 2025-02-25 12:42:07,607 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22907911485248)>', '<ExcThread(monitor, started 22907474405120)>']
[2025-02-25 13:42:43] 2025-02-25 12:42:07,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 13:42:43] 2025-02-25 12:42:07,651 | INFO     | [monitor] control thread has ended
[2025-02-25 13:42:43] 2025-02-25 12:42:12,632 | INFO     | all workflow threads have been joined
[2025-02-25 13:42:43] 2025-02-25 12:42:12,633 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 13:42:43] 2025-02-25 12:42:12,633 | INFO     | traces error code: 0
[2025-02-25 13:42:43] 2025-02-25 12:42:12,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 13:42:43] 2025-02-25 12:42:12,822 [wrapper] ==== pilot stdout END ====
[2025-02-25 13:42:43] 2025-02-25 12:42:12,827 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 13:42:43] 2025-02-25 12:42:12,831 [wrapper] pilotpid: 329486
[2025-02-25 13:42:43] 2025-02-25 12:42:12,835 [wrapper] Pilot exit status: 0
[2025-02-25 13:42:43] 2025-02-25 12:42:12,849 [wrapper] pandaids: 6522756263
[2025-02-25 13:42:43] 2025-02-25 12:42:12,998 [wrapper] cleanup supervisor_pilot 1422418 329487
[2025-02-25 13:42:43] 2025-02-25 12:42:13,003 [wrapper] Test setup, not cleaning
[2025-02-25 13:42:43] 2025-02-25 12:42:13,011 [wrapper] apfmon messages muted
[2025-02-25 13:42:43] 2025-02-25 12:42:13,015 [wrapper] ==== wrapper stdout END ====
[2025-02-25 13:42:43] 2025-02-25 12:42:13,019 [wrapper] ==== wrapper stderr END ====
[2025-02-25 13:42:43]  *** Error codes and diagnostics ***
[2025-02-25 13:42:43]     "exeErrorCode": 0,
[2025-02-25 13:42:43]     "exeErrorDiag": "",
[2025-02-25 13:42:43]     "pilotErrorCode": 0,
[2025-02-25 13:42:43]     "pilotErrorDiag": "",
[2025-02-25 13:42:43]  *** Listing of results directory ***
[2025-02-25 13:42:43] total 669516
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc    491065 Feb 22 07:14 pilot3.tar.gz
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc      5118 Feb 22 07:15 queuedata.json
[2025-02-25 13:42:43] -rwx------ 1 boinc boinc     35865 Feb 22 07:15 runpilot2-wrapper.sh
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc       100 Feb 25 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 13:42:43] -rwxr-xr-x 1 boinc boinc      7986 Feb 25 07:46 run_atlas
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc       105 Feb 25 07:46 job.xml
[2025-02-25 13:42:43] -rw-r--r-- 2 boinc boinc 344315754 Feb 25 07:46 EVNT.43092757._000968.pool.root.1
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc      6678 Feb 25 07:46 init_data.xml
[2025-02-25 13:42:43] -rw-r--r-- 2 boinc boinc     17569 Feb 25 07:46 start_atlas.sh
[2025-02-25 13:42:43] drwxrwx--x 2 boinc boinc      4096 Feb 25 07:46 shared
[2025-02-25 13:42:43] -rw-r--r-- 2 boinc boinc    503554 Feb 25 07:46 input.tar.gz
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc         0 Feb 25 07:46 boinc_lockfile
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc      2554 Feb 25 07:46 pandaJob.out
[2025-02-25 13:42:43] -rw------- 1 boinc boinc       424 Feb 25 07:46 setup.sh.local
[2025-02-25 13:42:43] -rw------- 1 boinc boinc    988867 Feb 25 07:46 agis_schedconf.cvmfs.json
[2025-02-25 13:42:43] drwx------ 4 boinc boinc      4096 Feb 25 07:46 pilot3
[2025-02-25 13:42:43] -rw------- 1 boinc boinc 331986674 Feb 25 13:40 HITS.43205075._058278.pool.root.1
[2025-02-25 13:42:43] -rw------- 1 boinc boinc        95 Feb 25 13:41 pilot_heartbeat.json
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc       529 Feb 25 13:41 boinc_task_state.xml
[2025-02-25 13:42:43] -rw------- 1 boinc boinc      1031 Feb 25 13:41 memory_monitor_summary.json
[2025-02-25 13:42:43] -rw------- 1 boinc boinc   1577983 Feb 25 13:41 agis_ddmendpoints.agis.ALL.json
[2025-02-25 13:42:43] -rw------- 1 boinc boinc    426519 Feb 25 13:41 log.43205075._058278.job.log.tgz.1
[2025-02-25 13:42:43] -rw------- 1 boinc boinc      7703 Feb 25 13:41 heartbeat.json
[2025-02-25 13:42:43] -rw------- 1 boinc boinc      4299 Feb 25 13:42 pilotlog.txt
[2025-02-25 13:42:43] -rw------- 1 boinc boinc   2310788 Feb 25 13:42 log.43205075._058278.job.log.1
[2025-02-25 13:42:43] -rw------- 1 boinc boinc       357 Feb 25 13:42 output.list
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc       620 Feb 25 13:42 runtime_log
[2025-02-25 13:42:43] -rw------- 1 boinc boinc   2754560 Feb 25 13:42 result.tar.gz
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc     11443 Feb 25 13:42 runtime_log.err
[2025-02-25 13:42:43] -rw------- 1 boinc boinc       667 Feb 25 13:42 fmALDmmyx56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmYatKDm0De6pm.diag
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc        26 Feb 25 13:42 wrapper_checkpoint.txt
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc      8192 Feb 25 13:42 boinc_mmap_file
[2025-02-25 13:42:43] -rw-r--r-- 1 boinc boinc     21261 Feb 25 13:42 stderr.txt
[2025-02-25 13:42:43] HITS file was successfully produced:
[2025-02-25 13:42:43] -rw------- 1 boinc boinc 331986674 Feb 25 13:40 shared/HITS.pool.root.1
[2025-02-25 13:42:43]  *** Contents of shared directory: ***
[2025-02-25 13:42:43] total 663668
[2025-02-25 13:42:43] -rw-r--r-- 2 boinc boinc 344315754 Feb 25 07:46 ATLAS.root_0
[2025-02-25 13:42:43] -rw-r--r-- 2 boinc boinc     17569 Feb 25 07:46 start_atlas.sh
[2025-02-25 13:42:43] -rw-r--r-- 2 boinc boinc    503554 Feb 25 07:46 input.tar.gz
[2025-02-25 13:42:43] -rw------- 1 boinc boinc 331986674 Feb 25 13:40 HITS.pool.root.1
[2025-02-25 13:42:43] -rw------- 1 boinc boinc   2754560 Feb 25 13:42 result.tar.gz
13:42:44 (315676): run_atlas exited; CPU time 80486.676470
13:42:44 (315676): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN