Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:17:05 (1042062): wrapper (7.7.26015): starting
18:17:05 (1042062): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 18:17:05] Arguments: --nthreads 4
[2025-02-24 18:17:05] Threads: 4
[2025-02-24 18:17:05] Checking for CVMFS
[2025-02-24 18:17:05] No cvmfs_config command found, will try listing directly
[2025-02-24 18:17:05] CVMFS is ok
[2025-02-24 18:17:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 18:17:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 18:17:05] Further information can be found at the LHC@home message board.
[2025-02-24 18:17:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 18:17:05] Checking for apptainer binary...
[2025-02-24 18:17:05] which: no apptainer in ((null))
[2025-02-24 18:17:05] apptainer is not installed, using version from CVMFS
[2025-02-24 18:17:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 18:17:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-02-24 18:17:06] apptainer works
[2025-02-24 18:17:06] Set ATHENA_PROC_NUMBER=4
[2025-02-24 18:17:06] Set ATHENA_CORE_NUMBER=4
[2025-02-24 18:17:06] Starting ATLAS job with PandaID=6522372761
[2025-02-24 18:17:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 00:29:45]  *** The last 200 lines of the pilot log: ***
[2025-02-25 00:29:45] 2025-02-24 23:28:24,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 00:29:45] 2025-02-24 23:28:24,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 00:29:45] 2025-02-24 23:28:24,800 | INFO     | fitting pss+swap vs Time
[2025-02-25 00:29:45] 2025-02-24 23:28:24,800 | INFO     | model: linear, x: [1740417461.0, 1740417522.0, 1740417583.0, 1740417644.0, 1740417705.0, 1740417766.0, 1740417827.0, 1740417888.0, 1740417949.0, 1740418010.0, 1740
[2025-02-25 00:29:45] 2025-02-24 23:28:24,801 | INFO     | sum of square deviations: 15078347830.0
[2025-02-25 00:29:45] 2025-02-24 23:28:24,804 | INFO     | sum of deviations: 64619870906.000015
[2025-02-25 00:29:45] 2025-02-24 23:28:24,804 | INFO     | mean x: 1740428563.0
[2025-02-25 00:29:45] 2025-02-24 23:28:24,804 | INFO     | mean y: 2390295.4493150683
[2025-02-25 00:29:45] 2025-02-24 23:28:24,804 | INFO     | -- intersect: -7456402294.439833
[2025-02-25 00:29:45] 2025-02-24 23:28:24,804 | INFO     | intersect: -7456402294.439833
[2025-02-25 00:29:45] 2025-02-24 23:28:24,805 | INFO     | chi2: 3.689045508650601
[2025-02-25 00:29:45] 2025-02-24 23:28:24,805 | INFO     | model: linear, x: [1740417461.0, 1740417522.0, 1740417583.0, 1740417644.0, 1740417705.0, 1740417766.0, 1740417827.0, 1740417888.0, 1740417949.0, 1740418010.0, 1740
[2025-02-25 00:29:45] 2025-02-24 23:28:24,806 | INFO     | sum of square deviations: 14467136370.0
[2025-02-25 00:29:45] 2025-02-24 23:28:24,809 | INFO     | sum of deviations: 86276349881.49998
[2025-02-25 00:29:45] 2025-02-24 23:28:24,809 | INFO     | mean x: 1740428410.5
[2025-02-25 00:29:45] 2025-02-24 23:28:24,809 | INFO     | mean y: 2395639.6027777777
[2025-02-25 00:29:45] 2025-02-24 23:28:24,809 | INFO     | -- intersect: -10376839521.225452
[2025-02-25 00:29:45] 2025-02-24 23:28:24,809 | INFO     | intersect: -10376839521.225452
[2025-02-25 00:29:45] 2025-02-24 23:28:24,810 | INFO     | chi2: 3.0339788848448617
[2025-02-25 00:29:45] 2025-02-24 23:28:24,810 | INFO     | current chi2=3.0339788848448617 (change=17.757076248304486 %)
[2025-02-25 00:29:45] 2025-02-24 23:28:24,810 | INFO     | right removable region: 359
[2025-02-25 00:29:45] 2025-02-24 23:28:24,811 | INFO     | model: linear, x: [1740417766.0, 1740417827.0, 1740417888.0, 1740417949.0, 1740418010.0, 1740418071.0, 1740418132.0, 1740418193.0, 1740418254.0, 1740418315.0, 1740
[2025-02-25 00:29:45] 2025-02-24 23:28:24,812 | INFO     | sum of square deviations: 14467136370.0
[2025-02-25 00:29:45] 2025-02-24 23:28:24,815 | INFO     | sum of deviations: -13974152670.000015
[2025-02-25 00:29:45] 2025-02-24 23:28:24,815 | INFO     | mean x: 1740428715.5
[2025-02-25 00:29:45] 2025-02-24 23:28:24,815 | INFO     | mean y: 2409859.761111111
[2025-02-25 00:29:45] 2025-02-24 23:28:24,815 | INFO     | -- intersect: 1683531538.5532367
[2025-02-25 00:29:45] 2025-02-24 23:28:24,815 | INFO     | intersect: 1683531538.5532367
[2025-02-25 00:29:45] 2025-02-24 23:28:24,816 | INFO     | chi2: 1.6370374377481827
[2025-02-25 00:29:45] 2025-02-24 23:28:24,816 | INFO     | current chi2=1.6370374377481827 (change=55.62436316089288 %)
[2025-02-25 00:29:45] 2025-02-24 23:28:24,816 | INFO     | model: linear, x: [1740418071.0, 1740418132.0, 1740418193.0, 1740418254.0, 1740418315.0, 1740418376.0, 1740418437.0, 1740418498.0, 1740418559.0, 1740418620.0, 1740
[2025-02-25 00:29:45] 2025-02-24 23:28:24,817 | INFO     | sum of square deviations: 13872669410.0
[2025-02-25 00:29:45] 2025-02-24 23:28:24,820 | INFO     | sum of deviations: -68823931492.0
[2025-02-25 00:29:45] 2025-02-24 23:28:24,820 | INFO     | mean x: 1740428868.0
[2025-02-25 00:29:45] 2025-02-24 23:28:24,820 | INFO     | mean y: 2423930.1154929576
[2025-02-25 00:29:45] 2025-02-24 23:28:24,820 | INFO     | -- intersect: 8636894603.19204
[2025-02-25 00:29:45] 2025-02-24 23:28:24,820 | INFO     | intersect: 8636894603.19204
[2025-02-25 00:29:45] 2025-02-24 23:28:24,821 | INFO     | chi2: 0.7302495874674408
[2025-02-25 00:29:45] 2025-02-24 23:28:24,821 | INFO     | current chi2=0.7302495874674408 (change=55.392004444813956 %)
[2025-02-25 00:29:45] 2025-02-24 23:28:24,821 | INFO     | model: linear, x: [1740418376.0, 1740418437.0, 1740418498.0, 1740418559.0, 1740418620.0, 1740418681.0, 1740418742.0, 1740418803.0, 1740418864.0, 1740418925.0, 1740
[2025-02-25 00:29:45] 2025-02-24 23:28:24,821 | INFO     | sum of square deviations: 13294714387.5
[2025-02-25 00:29:45] 2025-02-24 23:28:24,824 | INFO     | sum of deviations: -72202818909.0
[2025-02-25 00:29:45] 2025-02-24 23:28:24,825 | INFO     | mean x: 1740429020.5
[2025-02-25 00:29:45] 2025-02-24 23:28:24,825 | INFO     | mean y: 2424802.6342857145
[2025-02-25 00:29:45] 2025-02-24 23:28:24,825 | INFO     | -- intersect: 9454593365.90044
[2025-02-25 00:29:45] 2025-02-24 23:28:24,825 | INFO     | intersect: 9454593365.90044
[2025-02-25 00:29:45] 2025-02-24 23:28:24,825 | INFO     | chi2: 0.6965318344617684
[2025-02-25 00:29:45] 2025-02-24 23:28:24,825 | INFO     | current chi2=0.6965318344617684 (change=4.61729161978826 %)
[2025-02-25 00:29:45] 2025-02-24 23:28:24,826 | INFO     | left removable region: 30
[2025-02-25 00:29:45] 2025-02-24 23:28:24,826 | INFO     | model: linear, x: [1740419291.0, 1740419352.0, 1740419413.0, 1740419474.0, 1740419535.0, 1740419596.0, 1740419657.0, 1740419718.0, 1740419779.0, 1740419840.0, 1740
[2025-02-25 00:29:45] 2025-02-24 23:28:24,827 | INFO     | sum of square deviations: 11042365180.0
[2025-02-25 00:29:45] 2025-02-24 23:28:24,830 | INFO     | sum of deviations: -33319040458.0
[2025-02-25 00:29:45] 2025-02-24 23:28:24,830 | INFO     | mean x: 1740429295.0
[2025-02-25 00:29:45] 2025-02-24 23:28:24,830 | INFO     | mean y: 2426375.708206687
[2025-02-25 00:29:45] 2025-02-24 23:28:24,830 | INFO     | -- intersect: 5253967431.371195
[2025-02-25 00:29:45] 2025-02-24 23:28:24,830 | INFO     | intersect: 5253967431.371195
[2025-02-25 00:29:45] 2025-02-24 23:28:24,831 | INFO     | chi2: 0.014731132096487293
[2025-02-25 00:29:45] 2025-02-24 23:28:24,831 | INFO     | -- intersect: 5253967431.371195
[2025-02-25 00:29:45] 2025-02-24 23:28:24,831 | INFO     | current memory leak: -3.02 B/s (using 329 data points, chi2=0.01)
[2025-02-25 00:29:45] 2025-02-24 23:28:24,832 | INFO     | ..............................
[2025-02-25 00:29:45] 2025-02-24 23:28:24,832 | INFO     | . Timing measurements:
[2025-02-25 00:29:45] 2025-02-24 23:28:24,832 | INFO     | . get job = 0 s
[2025-02-25 00:29:45] 2025-02-24 23:28:24,832 | INFO     | . initial setup = 1 s
[2025-02-25 00:29:45] 2025-02-24 23:28:24,832 | INFO     | . payload setup = 6 s
[2025-02-25 00:29:45] 2025-02-24 23:28:24,832 | INFO     | . stage-in = 0 s
[2025-02-25 00:29:45] 2025-02-24 23:28:24,832 | INFO     | . payload execution = 22232 s
[2025-02-25 00:29:45] 2025-02-24 23:28:24,832 | INFO     | . stage-out = 1 s
[2025-02-25 00:29:45] 2025-02-24 23:28:24,832 | INFO     | . log creation = 0 s
[2025-02-25 00:29:45] 2025-02-24 23:28:24,832 | INFO     | ..............................
[2025-02-25 00:29:45] 2025-02-24 23:28:25,359 | INFO     | 
[2025-02-25 00:29:45] 2025-02-24 23:28:25,359 | INFO     | job summary report
[2025-02-25 00:29:45] 2025-02-24 23:28:25,359 | INFO     | --------------------------------------------------
[2025-02-25 00:29:45] 2025-02-24 23:28:25,359 | INFO     | PanDA job id: 6522372761
[2025-02-25 00:29:45] 2025-02-24 23:28:25,359 | INFO     | task id: 43078919
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | errors: (none)
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | pilot state: finished 
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | transexitcode: 0
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | exeerrorcode: 0
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | exeerrordiag: 
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | exitcode: 0
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | exitmsg: OK
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | cpuconsumptiontime: 84570 s
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | nevents: 400
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | neventsw: 0
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | pid: 1052809
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | pgrp: 1052809
[2025-02-25 00:29:45] 2025-02-24 23:28:25,360 | INFO     | corecount: 4
[2025-02-25 00:29:45] 2025-02-24 23:28:25,361 | INFO     | event service: False
[2025-02-25 00:29:45] 2025-02-24 23:28:25,361 | INFO     | sizes: {0: 2383322, 5: 2383528, 11: 2383584, 22242: 2417827, 22244: 2426790, 22247: 2426846, 22254: 2427144}
[2025-02-25 00:29:45] 2025-02-24 23:28:25,361 | INFO     | --------------------------------------------------
[2025-02-25 00:29:45] 2025-02-24 23:28:25,361 | INFO     | 
[2025-02-25 00:29:45] 2025-02-24 23:28:25,361 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2025-02-25 00:29:45] 2025-02-24 23:28:25,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,382 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,382 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,382 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,382 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,382 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,383 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,383 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,383 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 00:29:45] 2025-02-24 23:28:25,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,384 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 00:29:45] 2025-02-24 23:28:25,384 | INFO     | job 6522372761 has completed (purged errors)
[2025-02-25 00:29:45] 2025-02-24 23:28:25,384 | INFO     | overall cleanup function is called
[2025-02-25 00:29:45] 2025-02-24 23:28:26,392 | INFO     | --- collectZombieJob: --- 10, [1052809]
[2025-02-25 00:29:45] 2025-02-24 23:28:26,392 | INFO     | zombie collector waiting for pid 1052809
[2025-02-25 00:29:45] 2025-02-24 23:28:26,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 00:29:45] 2025-02-24 23:28:26,392 | INFO     | collected zombie processes
[2025-02-25 00:29:45] 2025-02-24 23:28:26,392 | INFO     | will attempt to kill all subprocesses of pid=1052809
[2025-02-25 00:29:45] 2025-02-24 23:28:26,583 | INFO     | process IDs to be killed: [1052809] (in reverse order)
[2025-02-25 00:29:45] 2025-02-24 23:28:26,714 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 00:29:45] 2025-02-24 23:28:26,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 00:29:45] 2025-02-24 23:28:26,729 | INFO     | did not find any defunct processes belonging to 1052809
[2025-02-25 00:29:45] 2025-02-24 23:28:26,741 | INFO     | did not find any defunct processes belonging to 1052809
[2025-02-25 00:29:45] 2025-02-24 23:28:26,741 | INFO     | ready for new job
[2025-02-25 00:29:45] 2025-02-24 23:28:26,742 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 00:29:45] 2025-02-24 23:28:26,744 | INFO     | **************************************
[2025-02-25 00:29:45] 2025-02-24 23:28:26,745 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 00:29:45] 2025-02-24 23:28:26,745 | INFO     | **************************************
[2025-02-25 00:29:45] 2025-02-24 23:28:26,745 | INFO     | 
[2025-02-25 00:29:45] 2025-02-24 23:28:26,749 | INFO     | architecture information:
[2025-02-25 00:29:45] 2025-02-24 23:28:26,749 | INFO     | executing command: cat /etc/os-release
[2025-02-25 00:29:45] 2025-02-24 23:28:26,765 | INFO     | cat /etc/os-release:
[2025-02-25 00:29:45] NAME="CentOS Linux"
[2025-02-25 00:29:45] VERSION="7 (Core)"
[2025-02-25 00:29:45] ID="centos"
[2025-02-25 00:29:45] ID_LIKE="rhel fedora"
[2025-02-25 00:29:45] VERSION_ID="7"
[2025-02-25 00:29:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 00:29:45] ANSI_COLOR="0;31"
[2025-02-25 00:29:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 00:29:45] HOME_URL="https://www.centos.org/"
[2025-02-25 00:29:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 00:29:45] 
[2025-02-25 00:29:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 00:29:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 00:29:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 00:29:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 00:29:45] 
[2025-02-25 00:29:45] 2025-02-24 23:28:26,766 | INFO     | **************************************
[2025-02-25 00:29:45] 2025-02-24 23:28:27,268 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2025-02-25 00:29:45] 2025-02-24 23:28:27,286 | INFO     | sufficient remaining disk space (649701883904 B)
[2025-02-25 00:29:45] 2025-02-24 23:28:27,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 00:29:45] 2025-02-24 23:28:27,287 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 00:29:45] 2025-02-24 23:28:27,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 00:29:45] 2025-02-24 23:28:27,287 | INFO     | aborting loop
[2025-02-25 00:29:45] 2025-02-24 23:28:27,482 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 00:29:45] 2025-02-24 23:28:27,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 00:29:45] 2025-02-24 23:28:27,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 00:29:45] 2025-02-24 23:28:28,103 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 00:29:45] 2025-02-24 23:28:28,209 | INFO     | all payload control threads have been joined
[2025-02-25 00:29:45] 2025-02-24 23:28:28,224 | INFO     | all data control threads have been joined
[2025-02-25 00:29:45] 2025-02-24 23:28:28,292 | INFO     | [job] retrieve thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:28,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 00:29:45] 2025-02-24 23:28:28,293 | INFO     | [job] job monitor thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:28,468 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:28,506 | INFO     | [payload] validate_post thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:28,722 | INFO     | all job control threads have been joined
[2025-02-25 00:29:45] 2025-02-24 23:28:29,038 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:29,214 | INFO     | [payload] control thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:29,229 | INFO     | [data] control thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:29,418 | INFO     | [job] validate thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:29,487 | INFO     | [payload] failed_post thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:29,640 | INFO     | [data] copytool_in thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:29,677 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:29,727 | INFO     | [job] control thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:29,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 00:29:45] 2025-02-24 23:28:30,108 | INFO     | [data] copytool_out thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:30,953 | INFO     | [job] queue monitor thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:32,298 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:38,089 | INFO     | job.realtimelogging is not enabled
[2025-02-25 00:29:45] 2025-02-24 23:28:39,090 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 00:29:45] 2025-02-24 23:28:39,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22548447881024)>', '<ExcThread(monitor, started 22548207060736)>']
[2025-02-25 00:29:45] 2025-02-24 23:28:40,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 00:29:45] 2025-02-24 23:28:40,548 | INFO     | [monitor] control thread has ended
[2025-02-25 00:29:45] 2025-02-24 23:28:44,990 | INFO     | all workflow threads have been joined
[2025-02-25 00:29:45] 2025-02-24 23:28:44,990 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 00:29:45] 2025-02-24 23:28:44,991 | INFO     | traces error code: 0
[2025-02-25 00:29:45] 2025-02-24 23:28:44,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 00:29:45] 2025-02-24 23:28:45,204 [wrapper] ==== pilot stdout END ====
[2025-02-25 00:29:45] 2025-02-24 23:28:45,208 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 00:29:45] 2025-02-24 23:28:45,211 [wrapper] pilotpid: 1045819
[2025-02-25 00:29:45] 2025-02-24 23:28:45,213 [wrapper] Pilot exit status: 0
[2025-02-25 00:29:45] 2025-02-24 23:28:45,225 [wrapper] pandaids: 6522372761
[2025-02-25 00:29:45] 2025-02-24 23:28:45,294 [wrapper] cleanup supervisor_pilot 1794365 1045820
[2025-02-25 00:29:45] 2025-02-24 23:28:45,297 [wrapper] Test setup, not cleaning
[2025-02-25 00:29:45] 2025-02-24 23:28:45,301 [wrapper] apfmon messages muted
[2025-02-25 00:29:45] 2025-02-24 23:28:45,304 [wrapper] ==== wrapper stdout END ====
[2025-02-25 00:29:45] 2025-02-24 23:28:45,306 [wrapper] ==== wrapper stderr END ====
[2025-02-25 00:29:45]  *** Error codes and diagnostics ***
[2025-02-25 00:29:45]     "exeErrorCode": 0,
[2025-02-25 00:29:45]     "exeErrorDiag": "",
[2025-02-25 00:29:45]     "pilotErrorCode": 0,
[2025-02-25 00:29:45]     "pilotErrorDiag": "",
[2025-02-25 00:29:45]  *** Listing of results directory ***
[2025-02-25 00:29:45] total 666308
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc    491065 Feb 21 17:22 pilot3.tar.gz
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc      5118 Feb 21 17:30 queuedata.json
[2025-02-25 00:29:45] -rwx------ 1 boinc boinc     35865 Feb 21 17:30 runpilot2-wrapper.sh
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc       100 Feb 24 17:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 00:29:45] -rwxr-xr-x 1 boinc boinc      7986 Feb 24 17:29 run_atlas
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc       105 Feb 24 17:29 job.xml
[2025-02-25 00:29:45] -rw-r--r-- 2 boinc boinc 345384284 Feb 24 18:17 EVNT.43078917._002451.pool.root.1
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc      6635 Feb 24 18:17 init_data.xml
[2025-02-25 00:29:45] drwxrwx--x 2 boinc boinc      4096 Feb 24 18:17 shared
[2025-02-25 00:29:45] -rw-r--r-- 2 boinc boinc    503552 Feb 24 18:17 input.tar.gz
[2025-02-25 00:29:45] -rw-r--r-- 2 boinc boinc     17569 Feb 24 18:17 start_atlas.sh
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc         0 Feb 24 18:17 boinc_lockfile
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc      2546 Feb 24 18:17 pandaJob.out
[2025-02-25 00:29:45] -rw------- 1 boinc boinc       424 Feb 24 18:17 setup.sh.local
[2025-02-25 00:29:45] -rw------- 1 boinc boinc    987749 Feb 24 18:17 agis_schedconf.cvmfs.json
[2025-02-25 00:29:45] drwx------ 4 boinc boinc      4096 Feb 24 18:17 pilot3
[2025-02-25 00:29:45] -rw------- 1 boinc boinc 327222797 Feb 25 00:27 HITS.43078919._084430.pool.root.1
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc       530 Feb 25 00:27 boinc_task_state.xml
[2025-02-25 00:29:45] -rw------- 1 boinc boinc        95 Feb 25 00:28 pilot_heartbeat.json
[2025-02-25 00:29:45] -rw------- 1 boinc boinc      1037 Feb 25 00:28 memory_monitor_summary.json
[2025-02-25 00:29:45] -rw------- 1 boinc boinc   1582569 Feb 25 00:28 agis_ddmendpoints.agis.ALL.json
[2025-02-25 00:29:45] -rw------- 1 boinc boinc    462695 Feb 25 00:28 log.43078919._084430.job.log.tgz.1
[2025-02-25 00:29:45] -rw------- 1 boinc boinc      7746 Feb 25 00:28 heartbeat.json
[2025-02-25 00:29:45] -rw------- 1 boinc boinc      4297 Feb 25 00:28 pilotlog.txt
[2025-02-25 00:29:45] -rw------- 1 boinc boinc   2482111 Feb 25 00:28 log.43078919._084430.job.log.1
[2025-02-25 00:29:45] -rw------- 1 boinc boinc       357 Feb 25 00:28 output.list
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc       620 Feb 25 00:28 runtime_log
[2025-02-25 00:29:45] -rw------- 1 boinc boinc   2959360 Feb 25 00:28 result.tar.gz
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc     11424 Feb 25 00:28 runtime_log.err
[2025-02-25 00:29:45] -rw------- 1 boinc boinc       665 Feb 25 00:28 VgUMDma6k56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5csKDmzRkYHn.diag
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc        27 Feb 25 00:29 wrapper_checkpoint.txt
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc      8192 Feb 25 00:29 boinc_mmap_file
[2025-02-25 00:29:45] -rw-r--r-- 1 boinc boinc     21269 Feb 25 00:29 stderr.txt
[2025-02-25 00:29:45] HITS file was successfully produced:
[2025-02-25 00:29:45] -rw------- 1 boinc boinc 327222797 Feb 25 00:27 shared/HITS.pool.root.1
[2025-02-25 00:29:45]  *** Contents of shared directory: ***
[2025-02-25 00:29:45] total 660260
[2025-02-25 00:29:45] -rw-r--r-- 2 boinc boinc 345384284 Feb 24 18:17 ATLAS.root_0
[2025-02-25 00:29:45] -rw-r--r-- 2 boinc boinc    503552 Feb 24 18:17 input.tar.gz
[2025-02-25 00:29:45] -rw-r--r-- 2 boinc boinc     17569 Feb 24 18:17 start_atlas.sh
[2025-02-25 00:29:45] -rw------- 1 boinc boinc 327222797 Feb 25 00:27 HITS.pool.root.1
[2025-02-25 00:29:45] -rw------- 1 boinc boinc   2959360 Feb 25 00:28 result.tar.gz
00:29:47 (1042062): run_atlas exited; CPU time 84669.979288
00:29:47 (1042062): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN