Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:44:36 (25385): wrapper (7.7.26015): starting
03:44:36 (25385): wrapper: running run_atlas (--nthreads 12)
[2025-02-22 03:44:36] Arguments: --nthreads 12
[2025-02-22 03:44:36] Threads: 12
[2025-02-22 03:44:36] Checking for CVMFS
[2025-02-22 03:44:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-22 03:44:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-22 03:44:36] Running cvmfs_config stat atlas.cern.ch
[2025-02-22 03:44:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-22 03:44:36] 2.11.2.0 22679 290316 155100 142933 3 55 16748689 20275201 1 130560 0 20808507 99.985 6822090 40216 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-22 03:44:36] CVMFS is ok
[2025-02-22 03:44:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 03:44:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 03:44:36] Further information can be found at the LHC@home message board.
[2025-02-22 03:44:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 03:44:36] Checking for apptainer binary...
[2025-02-22 03:44:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-22 03:44:36] Running /usr/bin/apptainer --version
[2025-02-22 03:44:37] apptainer version 1.3.2-1.el7
[2025-02-22 03:44:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 03:44:38] c-205-11.aglt2.org
[2025-02-22 03:44:38] apptainer works
[2025-02-22 03:44:38] Set ATHENA_PROC_NUMBER=12
[2025-02-22 03:44:38] Set ATHENA_CORE_NUMBER=12
[2025-02-22 03:44:38] Starting ATLAS job with PandaID=6522294256
[2025-02-22 03:44:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 06:27:27]  *** The last 200 lines of the pilot log: ***
[2025-02-22 06:27:27] 2025-02-22 11:27:07,930 | INFO     | mean x: 1740219655.0
[2025-02-22 06:27:27] 2025-02-22 11:27:07,930 | INFO     | mean y: 2776155.589147287
[2025-02-22 06:27:27] 2025-02-22 11:27:07,930 | INFO     | -- intersect: -4656950123.265131
[2025-02-22 06:27:27] 2025-02-22 11:27:07,930 | INFO     | intersect: -4656950123.265131
[2025-02-22 06:27:27] 2025-02-22 11:27:07,930 | INFO     | chi2: 0.010773844329739218
[2025-02-22 06:27:27] 2025-02-22 11:27:07,931 | INFO     | current chi2=0.010773844329739218 (change=77.81023592528189 %)
[2025-02-22 06:27:27] 2025-02-22 11:27:07,931 | INFO     | model: linear, x: [1740216056.0, 1740216117.0, 1740216178.0, 1740216239.0, 1740216300.0, 1740216361.0, 1740216422.0, 1740216483.0, 1740216544.0, 1740216605.0, 1740
[2025-02-22 06:27:27] 2025-02-22 11:27:07,931 | INFO     | sum of square deviations: 591173875.0
[2025-02-22 06:27:27] 2025-02-22 11:27:07,932 | INFO     | sum of deviations: 2325498303.0
[2025-02-22 06:27:27] 2025-02-22 11:27:07,932 | INFO     | mean x: 1740219807.5
[2025-02-22 06:27:27] 2025-02-22 11:27:07,932 | INFO     | mean y: 2775116.5967741935
[2025-02-22 06:27:27] 2025-02-22 11:27:07,932 | INFO     | -- intersect: -6842720566.358155
[2025-02-22 06:27:27] 2025-02-22 11:27:07,932 | INFO     | intersect: -6842720566.358155
[2025-02-22 06:27:27] 2025-02-22 11:27:07,932 | INFO     | chi2: 0.00039390776334238586
[2025-02-22 06:27:27] 2025-02-22 11:27:07,932 | INFO     | current chi2=0.00039390776334238586 (change=96.34385135624174 %)
[2025-02-22 06:27:27] 2025-02-22 11:27:07,933 | INFO     | model: linear, x: [1740216361.0, 1740216422.0, 1740216483.0, 1740216544.0, 1740216605.0, 1740216666.0, 1740216727.0, 1740216788.0, 1740216849.0, 1740216910.0, 1740
[2025-02-22 06:27:27] 2025-02-22 11:27:07,933 | INFO     | sum of square deviations: 522502820.0
[2025-02-22 06:27:27] 2025-02-22 11:27:07,933 | INFO     | sum of deviations: 1762529852.0
[2025-02-22 06:27:27] 2025-02-22 11:27:07,933 | INFO     | mean x: 1740219960.0
[2025-02-22 06:27:27] 2025-02-22 11:27:07,934 | INFO     | mean y: 2776365.487394958
[2025-02-22 06:27:27] 2025-02-22 11:27:07,934 | INFO     | -- intersect: -5867411337.128728
[2025-02-22 06:27:27] 2025-02-22 11:27:07,934 | INFO     | intersect: -5867411337.128728
[2025-02-22 06:27:27] 2025-02-22 11:27:07,934 | INFO     | chi2: 0.00020681797882296903
[2025-02-22 06:27:27] 2025-02-22 11:27:07,934 | INFO     | current chi2=0.00020681797882296903 (change=47.495835809866435 %)
[2025-02-22 06:27:27] 2025-02-22 11:27:07,934 | INFO     | model: linear, x: [1740216666.0, 1740216727.0, 1740216788.0, 1740216849.0, 1740216910.0, 1740216971.0, 1740217032.0, 1740217093.0, 1740217154.0, 1740217215.0, 1740
[2025-02-22 06:27:27] 2025-02-22 11:27:07,934 | INFO     | sum of square deviations: 459366752.5
[2025-02-22 06:27:27] 2025-02-22 11:27:07,935 | INFO     | sum of deviations: 1289137339.0
[2025-02-22 06:27:27] 2025-02-22 11:27:07,935 | INFO     | mean x: 1740220112.5
[2025-02-22 06:27:27] 2025-02-22 11:27:07,935 | INFO     | mean y: 2777507.403508772
[2025-02-22 06:27:27] 2025-02-22 11:27:07,935 | INFO     | -- intersect: -4880864403.756639
[2025-02-22 06:27:27] 2025-02-22 11:27:07,935 | INFO     | intersect: -4880864403.756639
[2025-02-22 06:27:27] 2025-02-22 11:27:07,936 | INFO     | chi2: 4.475802979358742e-05
[2025-02-22 06:27:27] 2025-02-22 11:27:07,936 | INFO     | current chi2=4.475802979358742e-05 (change=78.35873358384418 %)
[2025-02-22 06:27:27] 2025-02-22 11:27:07,936 | INFO     | model: linear, x: [1740216971.0, 1740217032.0, 1740217093.0, 1740217154.0, 1740217215.0, 1740217276.0, 1740217337.0, 1740217398.0, 1740217459.0, 1740217520.0, 1740
[2025-02-22 06:27:27] 2025-02-22 11:27:07,936 | INFO     | sum of square deviations: 401533110.0
[2025-02-22 06:27:27] 2025-02-22 11:27:07,937 | INFO     | sum of deviations: 1138619412.0
[2025-02-22 06:27:27] 2025-02-22 11:27:07,937 | INFO     | mean x: 1740220265.0
[2025-02-22 06:27:27] 2025-02-22 11:27:07,937 | INFO     | mean y: 2777904.220183486
[2025-02-22 06:27:27] 2025-02-22 11:27:07,937 | INFO     | -- intersect: -4931929908.255815
[2025-02-22 06:27:27] 2025-02-22 11:27:07,937 | INFO     | intersect: -4931929908.255815
[2025-02-22 06:27:27] 2025-02-22 11:27:07,937 | INFO     | chi2: 4.4399882578649324e-05
[2025-02-22 06:27:27] 2025-02-22 11:27:07,937 | INFO     | current chi2=4.4399882578649324e-05 (change=0.8001853892804883 %)
[2025-02-22 06:27:27] 2025-02-22 11:27:07,938 | INFO     | left removable region: 100
[2025-02-22 06:27:27] 2025-02-22 11:27:07,938 | INFO     | model: linear, x: [1740220021.0, 1740220082.0, 1740220143.0, 1740220204.0, 1740220265.0, 1740220326.0, 1740220387.0, 1740220448.0, 1740220509.0, 1740220570.0, 1740
[2025-02-22 06:27:27] 2025-02-22 11:27:07,938 | INFO     | sum of square deviations: 46147842.0
[2025-02-22 06:27:27] 2025-02-22 11:27:07,938 | INFO     | sum of deviations: 163432481.00000006
[2025-02-22 06:27:27] 2025-02-22 11:27:07,938 | INFO     | mean x: 1740221607.0
[2025-02-22 06:27:27] 2025-02-22 11:27:07,938 | INFO     | mean y: 2781343.754716981
[2025-02-22 06:27:27] 2025-02-22 11:27:07,938 | INFO     | -- intersect: -6160209652.049964
[2025-02-22 06:27:27] 2025-02-22 11:27:07,938 | INFO     | intersect: -6160209652.049964
[2025-02-22 06:27:27] 2025-02-22 11:27:07,939 | INFO     | chi2: 1.5156991242494141e-05
[2025-02-22 06:27:27] 2025-02-22 11:27:07,939 | INFO     | -- intersect: -6160209652.049964
[2025-02-22 06:27:27] 2025-02-22 11:27:07,939 | INFO     | current memory leak: 3.54 B/s (using 53 data points, chi2=0.00)
[2025-02-22 06:27:27] 2025-02-22 11:27:07,939 | INFO     | ..............................
[2025-02-22 06:27:27] 2025-02-22 11:27:07,939 | INFO     | . Timing measurements:
[2025-02-22 06:27:27] 2025-02-22 11:27:07,940 | INFO     | . get job = 0 s
[2025-02-22 06:27:27] 2025-02-22 11:27:07,940 | INFO     | . initial setup = 2 s
[2025-02-22 06:27:27] 2025-02-22 11:27:07,940 | INFO     | . payload setup = 7 s
[2025-02-22 06:27:27] 2025-02-22 11:27:07,940 | INFO     | . stage-in = 0 s
[2025-02-22 06:27:27] 2025-02-22 11:27:07,940 | INFO     | . payload execution = 9698 s
[2025-02-22 06:27:27] 2025-02-22 11:27:07,940 | INFO     | . stage-out = 0 s
[2025-02-22 06:27:27] 2025-02-22 11:27:07,940 | INFO     | . log creation = 0 s
[2025-02-22 06:27:27] 2025-02-22 11:27:07,940 | INFO     | ..............................
[2025-02-22 06:27:27] 2025-02-22 11:27:07,982 | WARNING  | process 3316 can no longer be monitored (due to stat problems) - aborting
[2025-02-22 06:27:27] 2025-02-22 11:27:07,983 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6522294256/memory_monitor_summary.json (trf name=prmon)
[2025-02-22 06:27:27] 2025-02-22 11:27:08,087 | INFO     | number of running child processes to parent process 3316: 1
[2025-02-22 06:27:27] 2025-02-22 11:27:08,087 | INFO     | maximum number of monitored processes: 6
[2025-02-22 06:27:27] 2025-02-22 11:27:08,087 | INFO     | aborting job monitoring since job object (job id=6522294256) has expired
[2025-02-22 06:27:27] 2025-02-22 11:27:08,351 | INFO     | 
[2025-02-22 06:27:27] 2025-02-22 11:27:08,352 | INFO     | job summary report
[2025-02-22 06:27:27] 2025-02-22 11:27:08,358 | INFO     | --------------------------------------------------
[2025-02-22 06:27:27] 2025-02-22 11:27:08,358 | INFO     | PanDA job id: 6522294256
[2025-02-22 06:27:27] 2025-02-22 11:27:08,358 | INFO     | task id: 43078919
[2025-02-22 06:27:27] 2025-02-22 11:27:08,358 | INFO     | errors: (none)
[2025-02-22 06:27:27] 2025-02-22 11:27:08,358 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 06:27:27] 2025-02-22 11:27:08,358 | INFO     | pilot state: finished 
[2025-02-22 06:27:27] 2025-02-22 11:27:08,358 | INFO     | transexitcode: 0
[2025-02-22 06:27:27] 2025-02-22 11:27:08,359 | INFO     | exeerrorcode: 0
[2025-02-22 06:27:27] 2025-02-22 11:27:08,359 | INFO     | exeerrordiag: 
[2025-02-22 06:27:27] 2025-02-22 11:27:08,359 | INFO     | exitcode: 0
[2025-02-22 06:27:27] 2025-02-22 11:27:08,359 | INFO     | exitmsg: OK
[2025-02-22 06:27:27] 2025-02-22 11:27:08,359 | INFO     | cpuconsumptiontime: 101978 s
[2025-02-22 06:27:27] 2025-02-22 11:27:08,359 | INFO     | nevents: 400
[2025-02-22 06:27:27] 2025-02-22 11:27:08,359 | INFO     | neventsw: 0
[2025-02-22 06:27:27] 2025-02-22 11:27:08,359 | INFO     | pid: 3316
[2025-02-22 06:27:27] 2025-02-22 11:27:08,360 | INFO     | pgrp: 3316
[2025-02-22 06:27:27] 2025-02-22 11:27:08,360 | INFO     | corecount: 12
[2025-02-22 06:27:27] 2025-02-22 11:27:08,360 | INFO     | event service: False
[2025-02-22 06:27:27] 2025-02-22 11:27:08,360 | INFO     | sizes: {0: 2383359, 1: 2383359, 5: 2383593, 11: 2383649, 9710: 2411845, 9711: 2420786, 9713: 2420970, 9720: 2421140}
[2025-02-22 06:27:27] 2025-02-22 11:27:08,360 | INFO     | --------------------------------------------------
[2025-02-22 06:27:27] 2025-02-22 11:27:08,360 | INFO     | 
[2025-02-22 06:27:27] 2025-02-22 11:27:08,360 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-22 06:27:27] 2025-02-22 11:27:08,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,385 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,385 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,387 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,388 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,388 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 06:27:27] 2025-02-22 11:27:08,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,388 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 06:27:27] 2025-02-22 11:27:08,388 | INFO     | job 6522294256 has completed (purged errors)
[2025-02-22 06:27:27] 2025-02-22 11:27:08,388 | INFO     | overall cleanup function is called
[2025-02-22 06:27:27] 2025-02-22 11:27:09,396 | INFO     | --- collectZombieJob: --- 10, [3316]
[2025-02-22 06:27:27] 2025-02-22 11:27:09,397 | INFO     | zombie collector waiting for pid 3316
[2025-02-22 06:27:27] 2025-02-22 11:27:09,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 06:27:27] 2025-02-22 11:27:09,397 | INFO     | collected zombie processes
[2025-02-22 06:27:27] 2025-02-22 11:27:09,397 | INFO     | will attempt to kill all subprocesses of pid=3316
[2025-02-22 06:27:27] 2025-02-22 11:27:09,460 | INFO     | process IDs to be killed: [3316] (in reverse order)
[2025-02-22 06:27:27] 2025-02-22 11:27:09,514 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 06:27:27] 2025-02-22 11:27:09,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 06:27:27] 2025-02-22 11:27:09,517 | INFO     | did not find any defunct processes belonging to 3316
[2025-02-22 06:27:27] 2025-02-22 11:27:09,520 | INFO     | did not find any defunct processes belonging to 3316
[2025-02-22 06:27:27] 2025-02-22 11:27:09,520 | INFO     | ready for new job
[2025-02-22 06:27:27] 2025-02-22 11:27:09,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 06:27:27] 2025-02-22 11:27:09,521 | INFO     | **************************************
[2025-02-22 06:27:27] 2025-02-22 11:27:09,521 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 06:27:27] 2025-02-22 11:27:09,521 | INFO     | **************************************
[2025-02-22 06:27:27] 2025-02-22 11:27:09,521 | INFO     | 
[2025-02-22 06:27:27] 2025-02-22 11:27:09,522 | INFO     | architecture information:
[2025-02-22 06:27:27] 2025-02-22 11:27:09,523 | INFO     | executing command: cat /etc/os-release
[2025-02-22 06:27:27] 2025-02-22 11:27:09,540 | INFO     | cat /etc/os-release:
[2025-02-22 06:27:27] NAME="CentOS Linux"
[2025-02-22 06:27:27] VERSION="7 (Core)"
[2025-02-22 06:27:27] ID="centos"
[2025-02-22 06:27:27] ID_LIKE="rhel fedora"
[2025-02-22 06:27:27] VERSION_ID="7"
[2025-02-22 06:27:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 06:27:27] ANSI_COLOR="0;31"
[2025-02-22 06:27:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 06:27:27] HOME_URL="https://www.centos.org/"
[2025-02-22 06:27:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 06:27:27] 
[2025-02-22 06:27:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 06:27:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 06:27:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 06:27:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 06:27:27] 
[2025-02-22 06:27:27] 2025-02-22 11:27:09,540 | INFO     | **************************************
[2025-02-22 06:27:27] 2025-02-22 11:27:10,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-22 06:27:27] 2025-02-22 11:27:10,060 | INFO     | sufficient remaining disk space (29041360896 B)
[2025-02-22 06:27:27] 2025-02-22 11:27:10,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 06:27:27] 2025-02-22 11:27:10,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 06:27:27] 2025-02-22 11:27:10,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 06:27:27] 2025-02-22 11:27:10,061 | INFO     | aborting loop
[2025-02-22 06:27:27] 2025-02-22 11:27:10,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 06:27:27] 2025-02-22 11:27:10,062 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 06:27:27] 2025-02-22 11:27:10,062 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 06:27:27] 2025-02-22 11:27:10,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 06:27:27] 2025-02-22 11:27:10,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 06:27:27] 2025-02-22 11:27:10,493 | INFO     | all payload control threads have been joined
[2025-02-22 06:27:27] 2025-02-22 11:27:10,574 | INFO     | all job control threads have been joined
[2025-02-22 06:27:27] 2025-02-22 11:27:11,045 | INFO     | all data control threads have been joined
[2025-02-22 06:27:27] 2025-02-22 11:27:11,066 | INFO     | [job] retrieve thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:11,067 | INFO     | [job] job monitor thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:11,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 06:27:27] 2025-02-22 11:27:11,310 | INFO     | [job] validate thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:11,469 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:11,491 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:11,499 | INFO     | [payload] control thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:11,578 | INFO     | [job] control thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:11,616 | INFO     | [payload] validate_post thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:12,047 | INFO     | [data] control thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:12,068 | INFO     | [data] copytool_out thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:12,155 | INFO     | [data] copytool_in thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:12,202 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:12,431 | INFO     | [payload] failed_post thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:13,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 06:27:27] 2025-02-22 11:27:14,051 | INFO     | [job] queue monitor thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:15,274 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:20,399 | INFO     | job.realtimelogging is not enabled
[2025-02-22 06:27:27] 2025-02-22 11:27:21,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 06:27:27] 2025-02-22 11:27:22,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139802371241792)>', '<ExcThread(monitor, started 139801579742976)>']
[2025-02-22 06:27:27] 2025-02-22 11:27:22,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 06:27:27] 2025-02-22 11:27:22,124 | INFO     | [monitor] control thread has ended
[2025-02-22 06:27:27] 2025-02-22 11:27:27,129 | INFO     | all workflow threads have been joined
[2025-02-22 06:27:27] 2025-02-22 11:27:27,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 06:27:27] 2025-02-22 11:27:27,130 | INFO     | traces error code: 0
[2025-02-22 06:27:27] 2025-02-22 11:27:27,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 06:27:27] 2025-02-22 11:27:27,221 [wrapper] ==== pilot stdout END ====
[2025-02-22 06:27:27] 2025-02-22 11:27:27,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 06:27:27] 2025-02-22 11:27:27,229 [wrapper] pilotpid: 29035
[2025-02-22 06:27:27] 2025-02-22 11:27:27,233 [wrapper] Pilot exit status: 0
[2025-02-22 06:27:27] 2025-02-22 11:27:27,249 [wrapper] pandaids: 6522294256
[2025-02-22 06:27:27] 2025-02-22 11:27:27,288 [wrapper] cleanup supervisor_pilot 26292 29036
[2025-02-22 06:27:27] 2025-02-22 11:27:27,292 [wrapper] Test setup, not cleaning
[2025-02-22 06:27:27] 2025-02-22 11:27:27,300 [wrapper] apfmon messages muted
[2025-02-22 06:27:27] 2025-02-22 11:27:27,304 [wrapper] ==== wrapper stdout END ====
[2025-02-22 06:27:27] 2025-02-22 11:27:27,308 [wrapper] ==== wrapper stderr END ====
[2025-02-22 06:27:27]  *** Error codes and diagnostics ***
[2025-02-22 06:27:27]     "exeErrorCode": 0,
[2025-02-22 06:27:27]     "exeErrorDiag": "",
[2025-02-22 06:27:27]     "pilotErrorCode": 0,
[2025-02-22 06:27:27]     "pilotErrorDiag": "",
[2025-02-22 06:27:27]  *** Listing of results directory ***
[2025-02-22 06:27:27] total 659888
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas    491065 Feb 21 07:31 pilot3.tar.gz
[2025-02-22 06:27:27] -rwx------ 1 boincer umatlas     35865 Feb 21 07:43 runpilot2-wrapper.sh
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas      5118 Feb 21 07:43 queuedata.json
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas       100 Feb 22 03:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 06:27:27] -rwxr-xr-x 1 boincer umatlas      7986 Feb 22 03:44 run_atlas
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas       105 Feb 22 03:44 job.xml
[2025-02-22 06:27:27] -rw-r--r-- 2 boincer umatlas 342811536 Feb 22 03:44 EVNT.43078917._001634.pool.root.1
[2025-02-22 06:27:27] drwxrwx--x 2 boincer umatlas      4096 Feb 22 03:44 shared
[2025-02-22 06:27:27] -rw-r--r-- 2 boincer umatlas    503555 Feb 22 03:44 input.tar.gz
[2025-02-22 06:27:27] -rw-r--r-- 2 boincer umatlas     17569 Feb 22 03:44 start_atlas.sh
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas         0 Feb 22 03:44 boinc_lockfile
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas      2545 Feb 22 03:44 pandaJob.out
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas       424 Feb 22 03:44 setup.sh.local
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas    988009 Feb 22 03:44 agis_schedconf.cvmfs.json
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas   1582569 Feb 22 03:44 agis_ddmendpoints.agis.ALL.json
[2025-02-22 06:27:27] drwx------ 4 boincer umatlas      4096 Feb 22 03:44 pilot3
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas      5868 Feb 22 06:21 init_data.xml
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas 326302533 Feb 22 06:26 HITS.43078919._083336.pool.root.1
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas       531 Feb 22 06:26 boinc_task_state.xml
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas      1049 Feb 22 06:26 memory_monitor_summary.json
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas    429937 Feb 22 06:26 log.43078919._083336.job.log.tgz.1
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas        95 Feb 22 06:26 pilot_heartbeat.json
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas      8192 Feb 22 06:27 boinc_mmap_file
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas        28 Feb 22 06:27 wrapper_checkpoint.txt
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas      7767 Feb 22 06:27 heartbeat.json
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas      4410 Feb 22 06:27 pilotlog.txt
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas    973852 Feb 22 06:27 log.43078919._083336.job.log.1
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas       357 Feb 22 06:27 output.list
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas       620 Feb 22 06:27 runtime_log
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas   1423360 Feb 22 06:27 result.tar.gz
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas     11015 Feb 22 06:27 runtime_log.err
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas       662 Feb 22 06:27 OqRMDmXYh56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmaJsKDm1RY5Em.diag
[2025-02-22 06:27:27] -rw-r--r-- 1 boincer umatlas     21609 Feb 22 06:27 stderr.txt
[2025-02-22 06:27:27] HITS file was successfully produced:
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas 326302533 Feb 22 06:26 shared/HITS.pool.root.1
[2025-02-22 06:27:27]  *** Contents of shared directory: ***
[2025-02-22 06:27:27] total 655344
[2025-02-22 06:27:27] -rw-r--r-- 2 boincer umatlas 342811536 Feb 22 03:44 ATLAS.root_0
[2025-02-22 06:27:27] -rw-r--r-- 2 boincer umatlas    503555 Feb 22 03:44 input.tar.gz
[2025-02-22 06:27:27] -rw-r--r-- 2 boincer umatlas     17569 Feb 22 03:44 start_atlas.sh
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas 326302533 Feb 22 06:26 HITS.pool.root.1
[2025-02-22 06:27:27] -rw------- 1 boincer umatlas   1423360 Feb 22 06:27 result.tar.gz
06:27:28 (25385): run_atlas exited; CPU time 101834.757083
06:27:28 (25385): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN