Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:51:12 (937520): wrapper (7.7.26015): starting
13:51:12 (937520): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 13:51:12] Arguments: --nthreads 4
[2025-02-24 13:51:12] Threads: 4
[2025-02-24 13:51:12] Checking for CVMFS
[2025-02-24 13:51:12] No cvmfs_config command found, will try listing directly
[2025-02-24 13:51:12] CVMFS is ok
[2025-02-24 13:51:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 13:51:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 13:51:12] Further information can be found at the LHC@home message board.
[2025-02-24 13:51:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 13:51:12] Checking for apptainer binary...
[2025-02-24 13:51:12] which: no apptainer in ((null))
[2025-02-24 13:51:12] apptainer is not installed, using version from CVMFS
[2025-02-24 13:51:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 13:51:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-02-24 13:51:13] apptainer works
[2025-02-24 13:51:13] Set ATHENA_PROC_NUMBER=4
[2025-02-24 13:51:13] Set ATHENA_CORE_NUMBER=4
[2025-02-24 13:51:13] Starting ATLAS job with PandaID=6522629371
[2025-02-24 13:51:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 19:51:52]  *** The last 200 lines of the pilot log: ***
[2025-02-24 19:51:52] 2025-02-24 18:51:40,240 | INFO     | sum of square deviations: 13755764892.5
[2025-02-24 19:51:52] 2025-02-24 18:51:40,243 | INFO     | sum of deviations: 143625249080.0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,243 | INFO     | mean x: 1740412283.5
[2025-02-24 19:51:52] 2025-02-24 18:51:40,243 | INFO     | mean y: 2345145.6327683614
[2025-02-24 19:51:52] 2025-02-24 18:51:40,243 | INFO     | -- intersect: -18169464977.108402
[2025-02-24 19:51:52] 2025-02-24 18:51:40,243 | INFO     | intersect: -18169464977.108402
[2025-02-24 19:51:52] 2025-02-24 18:51:40,244 | INFO     | chi2: 5.156006956246373
[2025-02-24 19:51:52] 2025-02-24 18:51:40,244 | INFO     | model: linear, x: [1740401517.0, 1740401578.0, 1740401639.0, 1740401700.0, 1740401761.0, 1740401822.0, 1740401883.0, 1740401944.0, 1740402005.0, 1740402066.0, 1740
[2025-02-24 19:51:52] 2025-02-24 18:51:40,245 | INFO     | sum of square deviations: 13181084350.0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,248 | INFO     | sum of deviations: 165192801066.00006
[2025-02-24 19:51:52] 2025-02-24 18:51:40,248 | INFO     | mean x: 1740412131.0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,248 | INFO     | mean y: 2350799.1203438397
[2025-02-24 19:51:52] 2025-02-24 18:51:40,248 | INFO     | -- intersect: -21809477977.253147
[2025-02-24 19:51:52] 2025-02-24 18:51:40,248 | INFO     | intersect: -21809477977.253147
[2025-02-24 19:51:52] 2025-02-24 18:51:40,248 | INFO     | chi2: 4.349224156012863
[2025-02-24 19:51:52] 2025-02-24 18:51:40,249 | INFO     | current chi2=4.349224156012863 (change=15.647434285481587 %)
[2025-02-24 19:51:52] 2025-02-24 18:51:40,249 | INFO     | right removable region: 348
[2025-02-24 19:51:52] 2025-02-24 18:51:40,249 | INFO     | model: linear, x: [1740401822.0, 1740401883.0, 1740401944.0, 1740402005.0, 1740402066.0, 1740402127.0, 1740402188.0, 1740402249.0, 1740402310.0, 1740402371.0, 1740
[2025-02-24 19:51:52] 2025-02-24 18:51:40,249 | INFO     | sum of square deviations: 13181084350.0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,252 | INFO     | sum of deviations: 56841730649.99999
[2025-02-24 19:51:52] 2025-02-24 18:51:40,252 | INFO     | mean x: 1740412436.0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,253 | INFO     | mean y: 2368139.0515759313
[2025-02-24 19:51:52] 2025-02-24 18:51:40,253 | INFO     | -- intersect: -7502936605.244545
[2025-02-24 19:51:52] 2025-02-24 18:51:40,253 | INFO     | intersect: -7502936605.244545
[2025-02-24 19:51:52] 2025-02-24 18:51:40,253 | INFO     | chi2: 2.5661107382519086
[2025-02-24 19:51:52] 2025-02-24 18:51:40,253 | INFO     | current chi2=2.5661107382519086 (change=50.23065794852876 %)
[2025-02-24 19:51:52] 2025-02-24 18:51:40,254 | INFO     | model: linear, x: [1740402127.0, 1740402188.0, 1740402249.0, 1740402310.0, 1740402371.0, 1740402432.0, 1740402493.0, 1740402554.0, 1740402615.0, 1740402676.0, 1740
[2025-02-24 19:51:52] 2025-02-24 18:51:40,255 | INFO     | sum of square deviations: 12622636670.0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,258 | INFO     | sum of deviations: -13710158608.499998
[2025-02-24 19:51:52] 2025-02-24 18:51:40,258 | INFO     | mean x: 1740412588.5
[2025-02-24 19:51:52] 2025-02-24 18:51:40,258 | INFO     | mean y: 2387405.648255814
[2025-02-24 19:51:52] 2025-02-24 18:51:40,258 | INFO     | -- intersect: 1892747815.7894945
[2025-02-24 19:51:52] 2025-02-24 18:51:40,258 | INFO     | intersect: 1892747815.7894945
[2025-02-24 19:51:52] 2025-02-24 18:51:40,259 | INFO     | chi2: 0.9782355717211089
[2025-02-24 19:51:52] 2025-02-24 18:51:40,259 | INFO     | current chi2=0.9782355717211089 (change=61.87866886884606 %)
[2025-02-24 19:51:52] 2025-02-24 18:51:40,259 | INFO     | model: linear, x: [1740402432.0, 1740402493.0, 1740402554.0, 1740402615.0, 1740402676.0, 1740402737.0, 1740402798.0, 1740402859.0, 1740402920.0, 1740402981.0, 1740
[2025-02-24 19:51:52] 2025-02-24 18:51:40,260 | INFO     | sum of square deviations: 12080189290.0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,263 | INFO     | sum of deviations: -31198478426.0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,263 | INFO     | mean x: 1740412741.0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,263 | INFO     | mean y: 2392303.8938053097
[2025-02-24 19:51:52] 2025-02-24 18:51:40,263 | INFO     | -- intersect: 4497208407.261671
[2025-02-24 19:51:52] 2025-02-24 18:51:40,263 | INFO     | intersect: 4497208407.261671
[2025-02-24 19:51:52] 2025-02-24 18:51:40,263 | INFO     | chi2: 0.8498799253074117
[2025-02-24 19:51:52] 2025-02-24 18:51:40,263 | INFO     | current chi2=0.8498799253074117 (change=13.12113872406705 %)
[2025-02-24 19:51:52] 2025-02-24 18:51:40,263 | INFO     | left removable region: 30
[2025-02-24 19:51:52] 2025-02-24 18:51:40,264 | INFO     | model: linear, x: [1740403347.0, 1740403408.0, 1740403469.0, 1740403530.0, 1740403591.0, 1740403652.0, 1740403713.0, 1740403774.0, 1740403835.0, 1740403896.0, 1740
[2025-02-24 19:51:52] 2025-02-24 18:51:40,264 | INFO     | sum of square deviations: 9971385099.5
[2025-02-24 19:51:52] 2025-02-24 18:51:40,267 | INFO     | sum of deviations: -13832328463.000002
[2025-02-24 19:51:52] 2025-02-24 18:51:40,267 | INFO     | mean x: 1740413015.5
[2025-02-24 19:51:52] 2025-02-24 18:51:40,267 | INFO     | mean y: 2400771.1383647798
[2025-02-24 19:51:52] 2025-02-24 18:51:40,267 | INFO     | -- intersect: 2416705729.9232244
[2025-02-24 19:51:52] 2025-02-24 18:51:40,267 | INFO     | intersect: 2416705729.9232244
[2025-02-24 19:51:52] 2025-02-24 18:51:40,267 | INFO     | chi2: 0.008654824593608473
[2025-02-24 19:51:52] 2025-02-24 18:51:40,267 | INFO     | -- intersect: 2416705729.9232244
[2025-02-24 19:51:52] 2025-02-24 18:51:40,268 | INFO     | current memory leak: -1.39 B/s (using 318 data points, chi2=0.01)
[2025-02-24 19:51:52] 2025-02-24 18:51:40,268 | INFO     | ..............................
[2025-02-24 19:51:52] 2025-02-24 18:51:40,268 | INFO     | . Timing measurements:
[2025-02-24 19:51:52] 2025-02-24 18:51:40,269 | INFO     | . get job = 0 s
[2025-02-24 19:51:52] 2025-02-24 18:51:40,269 | INFO     | . initial setup = 1 s
[2025-02-24 19:51:52] 2025-02-24 18:51:40,269 | INFO     | . payload setup = 7 s
[2025-02-24 19:51:52] 2025-02-24 18:51:40,269 | INFO     | . stage-in = 0 s
[2025-02-24 19:51:52] 2025-02-24 18:51:40,269 | INFO     | . payload execution = 21572 s
[2025-02-24 19:51:52] 2025-02-24 18:51:40,269 | INFO     | . stage-out = 1 s
[2025-02-24 19:51:52] 2025-02-24 18:51:40,269 | INFO     | . log creation = 0 s
[2025-02-24 19:51:52] 2025-02-24 18:51:40,269 | INFO     | ..............................
[2025-02-24 19:51:52] 2025-02-24 18:51:40,366 | INFO     | 
[2025-02-24 19:51:52] 2025-02-24 18:51:40,367 | INFO     | job summary report
[2025-02-24 19:51:52] 2025-02-24 18:51:40,367 | INFO     | --------------------------------------------------
[2025-02-24 19:51:52] 2025-02-24 18:51:40,367 | INFO     | PanDA job id: 6522629371
[2025-02-24 19:51:52] 2025-02-24 18:51:40,367 | INFO     | task id: 43205094
[2025-02-24 19:51:52] 2025-02-24 18:51:40,367 | INFO     | errors: (none)
[2025-02-24 19:51:52] 2025-02-24 18:51:40,367 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 19:51:52] 2025-02-24 18:51:40,367 | INFO     | pilot state: finished 
[2025-02-24 19:51:52] 2025-02-24 18:51:40,367 | INFO     | transexitcode: 0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,367 | INFO     | exeerrorcode: 0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,367 | INFO     | exeerrordiag: 
[2025-02-24 19:51:52] 2025-02-24 18:51:40,367 | INFO     | exitcode: 0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,368 | INFO     | exitmsg: OK
[2025-02-24 19:51:52] 2025-02-24 18:51:40,368 | INFO     | cpuconsumptiontime: 82330 s
[2025-02-24 19:51:52] 2025-02-24 18:51:40,368 | INFO     | nevents: 400
[2025-02-24 19:51:52] 2025-02-24 18:51:40,368 | INFO     | neventsw: 0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,368 | INFO     | pid: 949420
[2025-02-24 19:51:52] 2025-02-24 18:51:40,368 | INFO     | pgrp: 949420
[2025-02-24 19:51:52] 2025-02-24 18:51:40,368 | INFO     | corecount: 4
[2025-02-24 19:51:52] 2025-02-24 18:51:40,368 | INFO     | event service: False
[2025-02-24 19:51:52] 2025-02-24 18:51:40,368 | INFO     | sizes: {0: 2383149, 1: 2383348, 7: 2383554, 11: 2383582, 21584: 2416901, 21586: 2425864, 21590: 2426048, 21598: 2426218}
[2025-02-24 19:51:52] 2025-02-24 18:51:40,368 | INFO     | --------------------------------------------------
[2025-02-24 19:51:52] 2025-02-24 18:51:40,368 | INFO     | 
[2025-02-24 19:51:52] 2025-02-24 18:51:40,369 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-02-24 19:51:52] 2025-02-24 18:51:40,402 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,402 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,402 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,404 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 19:51:52] 2025-02-24 18:51:40,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,404 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 19:51:52] 2025-02-24 18:51:40,404 | INFO     | job 6522629371 has completed (purged errors)
[2025-02-24 19:51:52] 2025-02-24 18:51:40,405 | INFO     | overall cleanup function is called
[2025-02-24 19:51:52] 2025-02-24 18:51:41,414 | INFO     | --- collectZombieJob: --- 10, [949420]
[2025-02-24 19:51:52] 2025-02-24 18:51:41,415 | INFO     | zombie collector waiting for pid 949420
[2025-02-24 19:51:52] 2025-02-24 18:51:41,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 19:51:52] 2025-02-24 18:51:41,415 | INFO     | collected zombie processes
[2025-02-24 19:51:52] 2025-02-24 18:51:41,415 | INFO     | will attempt to kill all subprocesses of pid=949420
[2025-02-24 19:51:52] 2025-02-24 18:51:41,773 | INFO     | process IDs to be killed: [949420] (in reverse order)
[2025-02-24 19:51:52] 2025-02-24 18:51:41,788 | INFO     | PID=941554 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-24 19:51:52] 2025-02-24 18:51:41,789 | INFO     | .. there are 23 such processes running
[2025-02-24 19:51:52] 2025-02-24 18:51:42,041 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 19:51:52] 2025-02-24 18:51:42,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 19:51:52] 2025-02-24 18:51:42,067 | INFO     | did not find any defunct processes belonging to 949420
[2025-02-24 19:51:52] 2025-02-24 18:51:42,088 | INFO     | did not find any defunct processes belonging to 949420
[2025-02-24 19:51:52] 2025-02-24 18:51:42,088 | INFO     | ready for new job
[2025-02-24 19:51:52] 2025-02-24 18:51:42,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 19:51:52] 2025-02-24 18:51:42,091 | INFO     | **************************************
[2025-02-24 19:51:52] 2025-02-24 18:51:42,091 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 19:51:52] 2025-02-24 18:51:42,091 | INFO     | **************************************
[2025-02-24 19:51:52] 2025-02-24 18:51:42,091 | INFO     | 
[2025-02-24 19:51:52] 2025-02-24 18:51:42,100 | INFO     | architecture information:
[2025-02-24 19:51:52] 2025-02-24 18:51:42,100 | INFO     | executing command: cat /etc/os-release
[2025-02-24 19:51:52] 2025-02-24 18:51:42,121 | INFO     | cat /etc/os-release:
[2025-02-24 19:51:52] NAME="CentOS Linux"
[2025-02-24 19:51:52] VERSION="7 (Core)"
[2025-02-24 19:51:52] ID="centos"
[2025-02-24 19:51:52] ID_LIKE="rhel fedora"
[2025-02-24 19:51:52] VERSION_ID="7"
[2025-02-24 19:51:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 19:51:52] ANSI_COLOR="0;31"
[2025-02-24 19:51:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 19:51:52] HOME_URL="https://www.centos.org/"
[2025-02-24 19:51:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 19:51:52] 
[2025-02-24 19:51:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 19:51:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 19:51:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 19:51:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 19:51:52] 
[2025-02-24 19:51:52] 2025-02-24 18:51:42,121 | INFO     | **************************************
[2025-02-24 19:51:52] 2025-02-24 18:51:42,624 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-02-24 19:51:52] 2025-02-24 18:51:42,641 | INFO     | sufficient remaining disk space (3246588428288 B)
[2025-02-24 19:51:52] 2025-02-24 18:51:42,641 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 19:51:52] 2025-02-24 18:51:42,641 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 19:51:52] 2025-02-24 18:51:42,641 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-24 19:51:52] 2025-02-24 18:51:42,642 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 19:51:52] 2025-02-24 18:51:42,642 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 19:51:52] 2025-02-24 18:51:42,642 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 19:51:52] 2025-02-24 18:51:42,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 19:51:52] 2025-02-24 18:51:42,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 19:51:52] 2025-02-24 18:51:43,003 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-24 19:51:52] 2025-02-24 18:51:43,004 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-24 19:51:52] 2025-02-24 18:51:43,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 19:51:52] 2025-02-24 18:51:43,004 | INFO     | will abort loop
[2025-02-24 19:51:52] 2025-02-24 18:51:43,355 | INFO     | all payload control threads have been joined
[2025-02-24 19:51:52] 2025-02-24 18:51:43,643 | INFO     | [job] retrieve thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:43,651 | INFO     | [payload] validate_post thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:43,662 | INFO     | all job control threads have been joined
[2025-02-24 19:51:52] 2025-02-24 18:51:43,688 | INFO     | all data control threads have been joined
[2025-02-24 19:51:52] 2025-02-24 18:51:43,896 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:43,934 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:44,009 | INFO     | [job] job monitor thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:44,123 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:44,361 | INFO     | [payload] control thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:44,422 | INFO     | [data] copytool_in thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:44,635 | INFO     | [payload] failed_post thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:44,644 | INFO     | [data] copytool_out thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:44,668 | INFO     | [job] control thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:44,694 | INFO     | [data] control thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:44,855 | INFO     | [job] validate thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:44,866 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:45,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 19:51:52] 2025-02-24 18:51:46,382 | INFO     | [job] queue monitor thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:46,649 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 19:51:52] 2025-02-24 18:51:47,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22548274886464)>', '<ExcThread(monitor, started 22547699582720)>']
[2025-02-24 19:51:52] 2025-02-24 18:51:47,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 19:51:52] 2025-02-24 18:51:47,660 | INFO     | [monitor] control thread has ended
[2025-02-24 19:51:52] 2025-02-24 18:51:52,098 | INFO     | all workflow threads have been joined
[2025-02-24 19:51:52] 2025-02-24 18:51:52,099 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 19:51:52] 2025-02-24 18:51:52,099 | INFO     | traces error code: 0
[2025-02-24 19:51:52] 2025-02-24 18:51:52,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 19:51:52] 2025-02-24 18:51:52,243 [wrapper] ==== pilot stdout END ====
[2025-02-24 19:51:52] 2025-02-24 18:51:52,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 19:51:52] 2025-02-24 18:51:52,252 [wrapper] pilotpid: 941554
[2025-02-24 19:51:52] 2025-02-24 18:51:52,254 [wrapper] Pilot exit status: 0
[2025-02-24 19:51:52] 2025-02-24 18:51:52,267 [wrapper] pandaids: 6522629371
[2025-02-24 19:51:52] 2025-02-24 18:51:52,416 [wrapper] cleanup supervisor_pilot 2357797 941555
[2025-02-24 19:51:52] 2025-02-24 18:51:52,420 [wrapper] Test setup, not cleaning
[2025-02-24 19:51:52] 2025-02-24 18:51:52,427 [wrapper] apfmon messages muted
[2025-02-24 19:51:52] 2025-02-24 18:51:52,430 [wrapper] ==== wrapper stdout END ====
[2025-02-24 19:51:52] 2025-02-24 18:51:52,433 [wrapper] ==== wrapper stderr END ====
[2025-02-24 19:51:52]  *** Error codes and diagnostics ***
[2025-02-24 19:51:52]     "exeErrorCode": 0,
[2025-02-24 19:51:52]     "exeErrorDiag": "",
[2025-02-24 19:51:52]     "pilotErrorCode": 0,
[2025-02-24 19:51:52]     "pilotErrorDiag": "",
[2025-02-24 19:51:52]  *** Listing of results directory ***
[2025-02-24 19:51:52] total 663200
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc    491065 Feb 22 03:00 pilot3.tar.gz
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc      5118 Feb 22 03:18 queuedata.json
[2025-02-24 19:51:52] -rwx------ 1 boinc boinc     35865 Feb 22 03:19 runpilot2-wrapper.sh
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc       100 Feb 24 12:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 19:51:52] -rwxr-xr-x 1 boinc boinc      7986 Feb 24 12:38 run_atlas
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc       105 Feb 24 12:38 job.xml
[2025-02-24 19:51:52] -rw-r--r-- 2 boinc boinc 341556290 Feb 24 13:51 EVNT.43092757._001769.pool.root.1
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc      6677 Feb 24 13:51 init_data.xml
[2025-02-24 19:51:52] -rw-r--r-- 2 boinc boinc     17569 Feb 24 13:51 start_atlas.sh
[2025-02-24 19:51:52] drwxrwx--x 2 boinc boinc      4096 Feb 24 13:51 shared
[2025-02-24 19:51:52] -rw-r--r-- 2 boinc boinc    503560 Feb 24 13:51 input.tar.gz
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc         0 Feb 24 13:51 boinc_lockfile
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc      2547 Feb 24 13:51 pandaJob.out
[2025-02-24 19:51:52] -rw------- 1 boinc boinc       424 Feb 24 13:51 setup.sh.local
[2025-02-24 19:51:52] -rw------- 1 boinc boinc    987749 Feb 24 13:51 agis_schedconf.cvmfs.json
[2025-02-24 19:51:52] drwx------ 4 boinc boinc      4096 Feb 24 13:51 pilot3
[2025-02-24 19:51:52] -rw------- 1 boinc boinc 328075630 Feb 24 19:50 HITS.43205094._034830.pool.root.1
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc       530 Feb 24 19:50 boinc_task_state.xml
[2025-02-24 19:51:52] -rw------- 1 boinc boinc        95 Feb 24 19:51 pilot_heartbeat.json
[2025-02-24 19:51:52] -rw------- 1 boinc boinc      1031 Feb 24 19:51 memory_monitor_summary.json
[2025-02-24 19:51:52] -rw------- 1 boinc boinc   1582569 Feb 24 19:51 agis_ddmendpoints.agis.ALL.json
[2025-02-24 19:51:52] -rw------- 1 boinc boinc    426117 Feb 24 19:51 log.43205094._034830.job.log.tgz.1
[2025-02-24 19:51:52] -rw------- 1 boinc boinc      7704 Feb 24 19:51 heartbeat.json
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc      8192 Feb 24 19:51 boinc_mmap_file
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc        27 Feb 24 19:51 wrapper_checkpoint.txt
[2025-02-24 19:51:52] -rw------- 1 boinc boinc      4535 Feb 24 19:51 pilotlog.txt
[2025-02-24 19:51:52] -rw------- 1 boinc boinc   2411795 Feb 24 19:51 log.43205094._034830.job.log.1
[2025-02-24 19:51:52] -rw------- 1 boinc boinc       357 Feb 24 19:51 output.list
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc       620 Feb 24 19:51 runtime_log
[2025-02-24 19:51:52] -rw------- 1 boinc boinc   2856960 Feb 24 19:51 result.tar.gz
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc     11424 Feb 24 19:51 runtime_log.err
[2025-02-24 19:51:52] -rw------- 1 boinc boinc       666 Feb 24 19:51 T7cKDm1Hu56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgLtKDmmwaP1n.diag
[2025-02-24 19:51:52] -rw-r--r-- 1 boinc boinc     21377 Feb 24 19:51 stderr.txt
[2025-02-24 19:51:52] HITS file was successfully produced:
[2025-02-24 19:51:52] -rw------- 1 boinc boinc 328075630 Feb 24 19:50 shared/HITS.pool.root.1
[2025-02-24 19:51:52]  *** Contents of shared directory: ***
[2025-02-24 19:51:52] total 657252
[2025-02-24 19:51:52] -rw-r--r-- 2 boinc boinc 341556290 Feb 24 13:51 ATLAS.root_0
[2025-02-24 19:51:52] -rw-r--r-- 2 boinc boinc     17569 Feb 24 13:51 start_atlas.sh
[2025-02-24 19:51:52] -rw-r--r-- 2 boinc boinc    503560 Feb 24 13:51 input.tar.gz
[2025-02-24 19:51:52] -rw------- 1 boinc boinc 328075630 Feb 24 19:50 HITS.pool.root.1
[2025-02-24 19:51:52] -rw------- 1 boinc boinc   2856960 Feb 24 19:51 result.tar.gz
19:51:54 (937520): run_atlas exited; CPU time 81931.985195
19:51:54 (937520): called boinc_finish(0)

</stderr_txt>
]]>

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