Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-22 08:41:03 (670424): Detected: vboxwrapper 26206
2025-02-22 08:41:03 (670424): Detected: BOINC client v8.1.0
2025-02-22 08:41:04 (670424): Detected: VirtualBox VboxManage Interface (Version: 7.0.24)
2025-02-22 08:41:04 (670424): Successfully copied 'init_data.xml' to the shared directory.
2025-02-22 08:41:04 (670424): Create VM. (boinc_31af6a66e58811d2, slot#1)
2025-02-22 08:41:04 (670424): Setting Memory Size for VM. (4600MB)
2025-02-22 08:41:04 (670424): Setting CPU Count for VM. (6)
2025-02-22 08:41:04 (670424): Setting Chipset Options for VM.
2025-02-22 08:41:04 (670424): Setting Graphics Controller Options for VM.
2025-02-22 08:41:04 (670424): Setting Boot Options for VM.
2025-02-22 08:41:04 (670424): Setting Network Configuration for NAT.
2025-02-22 08:41:04 (670424): Enabling VM Network Access.
2025-02-22 08:41:04 (670424): Disabling USB Support for VM.
2025-02-22 08:41:04 (670424): Disabling COM Port Support for VM.
2025-02-22 08:41:04 (670424): Disabling LPT Port Support for VM.
2025-02-22 08:41:04 (670424): Disabling Audio Support for VM.
2025-02-22 08:41:05 (670424): Disabling Clipboard Support for VM.
2025-02-22 08:41:05 (670424): Disabling Drag and Drop Support for VM.
2025-02-22 08:41:05 (670424): Adding storage controller(s) to VM.
2025-02-22 08:41:05 (670424): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-22 08:41:06 (670424): Adding VirtualBox Guest Additions to VM.
2025-02-22 08:41:06 (670424): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-22 08:41:06 (670424): forwarding host port 56125 to guest port 80
2025-02-22 08:41:06 (670424): Enabling remote desktop for VM.
2025-02-22 08:41:06 (670424): Required extension pack not installed, remote desktop not enabled.
2025-02-22 08:41:06 (670424): Enabling shared directory for VM.
2025-02-22 08:41:06 (670424): Starting VM using VBoxManage interface. (boinc_31af6a66e58811d2, slot#1)
2025-02-22 08:41:07 (670424): Successfully started VM. (PID = '671009')
2025-02-22 08:41:07 (670424): Reporting VM Process ID to BOINC.
2025-02-22 08:41:07 (670424): Guest Log: BIOS: VirtualBox 7.0.24
2025-02-22 08:41:07 (670424): Guest Log: CPUID EDX: 0x178bfbff
2025-02-22 08:41:07 (670424): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-22 08:41:07 (670424): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-22 08:41:07 (670424): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-22 08:41:07 (670424): Detected: Web Application Enabled (http://localhost:56125)
2025-02-22 08:41:07 (670424): Preference change detected
2025-02-22 08:41:07 (670424): Setting CPU throttle for VM. (100%)
2025-02-22 08:41:08 (670424): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-22 08:41:09 (670424): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-22 08:41:09 (670424): Guest Log: BIOS: Booting from Hard Disk...
2025-02-22 08:41:12 (670424): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-22 08:41:12 (670424): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-22 08:41:12 (670424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-22 08:41:18 (670424): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-22 08:41:18 (670424): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-22 08:41:23 (670424): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-22 08:41:23 (670424): Guest Log: 00:00:00.000171 main     Log opened 2025-02-22T15:41:22.160014000Z
2025-02-22 08:41:23 (670424): Guest Log: 00:00:00.000265 main     OS Product: Linux
2025-02-22 08:41:23 (670424): Guest Log: 00:00:00.000287 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-22 08:41:23 (670424): Guest Log: 00:00:00.000305 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-22 08:41:23 (670424): Guest Log: 00:00:00.000322 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-22 08:41:23 (670424): Guest Log: 00:00:00.000323 main     Process ID: 1327
2025-02-22 08:41:23 (670424): Guest Log: 00:00:00.000324 main     Package type: LINUX_64BITS_GENERIC
2025-02-22 08:41:23 (670424): Guest Log: 00:00:00.001212 main     5.2.32 r132073 started. Verbose level = 0
2025-02-22 08:41:23 (670424): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-22 08:41:23 (670424): Guest Log: [INFO] Mounting shared directory
2025-02-22 08:41:23 (670424): Guest Log: [INFO] Checking for init_data.xml
2025-02-22 08:41:32 (670424): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-22 08:41:32 (670424): Guest Log: [INFO] Detected branch: prod
2025-02-22 08:41:33 (670424): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-22 08:41:33 (670424): Guest Log: Copying input files
2025-02-22 08:41:34 (670424): Guest Log: Copied input files into RunAtlas.
2025-02-22 08:41:34 (670424): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-22 08:41:34 (670424): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-22 08:41:34 (670424): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-22 08:41:34 (670424): Guest Log: Further information can be found at the LHC@home message board.
2025-02-22 08:41:44 (670424): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-22 08:41:44 (670424): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-22 08:41:44 (670424): Guest Log: 2.6.3.0 1606 0 32224 142944 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-22 08:41:45 (670424): Guest Log: copied the webapp to /var/www
2025-02-22 08:41:45 (670424): Guest Log: ATHENA_PROC_NUMBER=6
2025-02-22 08:41:45 (670424): Guest Log: ATHENA_CORE_NUMBER=6
2025-02-22 08:41:46 (670424): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-22 08:41:46 (670424): Guest Log:  *** Starting ATLAS job. (PandaID=6522371148 taskID=43205075) ***
2025-02-22 10:20:10 (670424): Status Report: Elapsed Time: '6000.000000'
2025-02-22 10:20:10 (670424): Status Report: CPU Time: '26526.350000'
2025-02-22 11:59:14 (670424): Status Report: Elapsed Time: '12000.000000'
2025-02-22 11:59:14 (670424): Status Report: CPU Time: '61351.980000'
2025-02-22 12:43:30 (670424): Guest Log:  *** Job finished ***
2025-02-22 12:43:30 (670424): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:18,720 | INFO     | [payload] validate_pre thread has finished
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:19,145 | INFO     | [data] copytool_out thread has finished
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:22,717 | INFO     | [data] queue_monitor thread has finished
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:23,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022544930624)>', '<ExcThread(monitor, started 140021956859648)>']
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:24,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:24,415 | INFO     | [monitor] control thread has ended
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:28,483 | INFO     | all workflow threads have been joined
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:28,483 | INFO     | end of generic workflow (traces error code: 0)
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:28,483 | INFO     | traces error code: 0
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:28,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:28,593 [wrapper] ==== pilot stdout END ====
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:28,599 [wrapper] ==== wrapper stdout RESUME ====
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:28,609 [wrapper] pilotpid: 5963
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:28,615 [wrapper] Pilot exit status: 0
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:29,250 [wrapper] pandaids: 6522371148
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:29,286 [wrapper] cleanup supervisor_pilot 15445 5964
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:29,296 [wrapper] Test setup, not cleaning
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:29,323 [wrapper] apfmon messages muted
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:29,338 [wrapper] ==== wrapper stdout END ====
2025-02-22 12:43:30 (670424): Guest Log: 2025-02-22 19:43:29,344 [wrapper] ==== wrapper stderr END ====
2025-02-22 12:43:30 (670424): Guest Log:  *** Error codes and diagnostics ***
2025-02-22 12:43:30 (670424): Guest Log:     "exeErrorCode": 0,
2025-02-22 12:43:30 (670424): Guest Log:     "exeErrorDiag": "",
2025-02-22 12:43:30 (670424): Guest Log:     "pilotErrorCode": 0,
2025-02-22 12:43:30 (670424): Guest Log:     "pilotErrorDiag": "",
2025-02-22 12:43:30 (670424): Guest Log:  *** Listing of results directory ***
2025-02-22 12:43:30 (670424): Guest Log: total 321620
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 21 15:37 pilot3.tar.gz
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 21 15:45 queuedata.json
2025-02-22 12:43:30 (670424): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 21 15:46 runpilot2-wrapper.sh
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 atlas atlas      6820 Feb 22 15:41 init_data.xml
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 atlas atlas    503560 Feb 22 15:41 input.tar.gz
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb 22 15:41 start_atlas.sh
2025-02-22 12:43:30 (670424): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 22 15:41 EVNT.43092757._000841.pool.root.1 -> /data/./ATLAS.root_0
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 atlas atlas      2554 Feb 22 15:41 pandaJob.out
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas       424 Feb 22 15:42 setup.sh.local
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas    987736 Feb 22 15:44 agis_schedconf.cvmfs.json
2025-02-22 12:43:30 (670424): Guest Log: drwx------. 4 atlas atlas      4096 Feb 22 15:44 pilot3
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas 322575390 Feb 22 19:42 HITS.43205075._057605.pool.root.1
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas        95 Feb 22 19:42 pilot_heartbeat.json
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas      1036 Feb 22 19:42 memory_monitor_summary.json
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 22 19:42 agis_ddmendpoints.agis.ALL.json
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas    347660 Feb 22 19:42 log.43205075._057605.job.log.tgz.1
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas      7765 Feb 22 19:43 heartbeat.json
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 22 19:43 pilotlog.txt
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas   1169686 Feb 22 19:43 log.43205075._057605.job.log.1
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas       357 Feb 22 19:43 output.list
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 22 19:43 runtime_log
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas   1536000 Feb 22 19:43 result.tar.gz
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas       665 Feb 22 19:43 VJhMDmLPk56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmaZsKDmxrNWGm.diag
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 atlas atlas     10963 Feb 22 19:43 runtime_log.err
2025-02-22 12:43:30 (670424): Guest Log: Looking for outputfile HITS.43205075._057605.pool.root.1
2025-02-22 12:43:30 (670424): Guest Log: HITS file was successfully produced
2025-02-22 12:43:30 (670424): Guest Log: -rw-------. 1 atlas atlas 322575390 Feb 22 19:42 /home/atlas/RunAtlas/HITS.43205075._057605.pool.root.1
2025-02-22 12:43:30 (670424): Guest Log: Successfully finished the ATLAS job!
2025-02-22 12:43:30 (670424): Guest Log: Copying the results back to the shared directory!
2025-02-22 12:43:30 (670424): Guest Log:  *** Contents of shared directory: ***
2025-02-22 12:43:30 (670424): Guest Log: total 339048
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 root root 345111534 Feb 22 15:41 ATLAS.root_0
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 root root      6820 Feb 22 15:41 init_data.xml
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 root root    503560 Feb 22 15:41 input.tar.gz
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 root root   1536000 Feb 22 19:43 result.tar.gz
2025-02-22 12:43:30 (670424): Guest Log: -rw-r--r--. 1 root root     17569 Feb 22 15:41 start_atlas.sh
2025-02-22 12:43:30 (670424): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-22 12:43:30 (670424): VM Completion File Detected.
2025-02-22 12:43:30 (670424): Powering off VM.
2025-02-22 12:43:31 (670424): Successfully stopped VM.
2025-02-22 12:43:31 (670424): Deregistering VM. (boinc_31af6a66e58811d2, slot#1)
2025-02-22 12:43:31 (670424): Removing network bandwidth throttle group from VM.
2025-02-22 12:43:31 (670424): Removing VM from VirtualBox.
12:43:36 (670424): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN