Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:49:54 (1281551): wrapper (7.7.26015): starting
09:49:54 (1281551): wrapper: running run_atlas (--nthreads 4)
[2025-02-26 09:49:54] Arguments: --nthreads 4
[2025-02-26 09:49:54] Threads: 4
[2025-02-26 09:49:54] Checking for CVMFS
[2025-02-26 09:49:54] No cvmfs_config command found, will try listing directly
[2025-02-26 09:49:54] CVMFS is ok
[2025-02-26 09:49:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 09:49:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 09:49:54] Further information can be found at the LHC@home message board.
[2025-02-26 09:49:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 09:49:54] Checking for apptainer binary...
[2025-02-26 09:49:54] which: no apptainer in ((null))
[2025-02-26 09:49:54] apptainer is not installed, using version from CVMFS
[2025-02-26 09:49:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 09:49:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-02-26 09:49:55] apptainer works
[2025-02-26 09:49:55] Set ATHENA_PROC_NUMBER=4
[2025-02-26 09:49:55] Set ATHENA_CORE_NUMBER=4
[2025-02-26 09:49:55] Starting ATLAS job with PandaID=6522333303
[2025-02-26 09:49:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 15:46:21]  *** The last 200 lines of the pilot log: ***
[2025-02-26 15:46:21] 2025-02-26 14:46:00,936 | INFO     | mean x: 1740570483.5
[2025-02-26 15:46:21] 2025-02-26 14:46:00,936 | INFO     | mean y: 2322609.9942857143
[2025-02-26 15:46:21] 2025-02-26 14:46:00,936 | INFO     | -- intersect: -19796936079.134094
[2025-02-26 15:46:21] 2025-02-26 14:46:00,936 | INFO     | intersect: -19796936079.134094
[2025-02-26 15:46:21] 2025-02-26 14:46:00,937 | INFO     | chi2: 4.8361127988449235
[2025-02-26 15:46:21] 2025-02-26 14:46:00,937 | INFO     | model: linear, x: [1740559839.0, 1740559900.0, 1740559961.0, 1740560022.0, 1740560083.0, 1740560144.0, 1740560205.0, 1740560266.0, 1740560327.0, 1740560388.0, 1740
[2025-02-26 15:46:21] 2025-02-26 14:46:00,939 | INFO     | sum of square deviations: 12733038740.0
[2025-02-26 15:46:21] 2025-02-26 14:46:00,942 | INFO     | sum of deviations: 171238446344.99997
[2025-02-26 15:46:21] 2025-02-26 14:46:00,942 | INFO     | mean x: 1740570331.0
[2025-02-26 15:46:21] 2025-02-26 14:46:00,942 | INFO     | mean y: 2327972.295652174
[2025-02-26 15:46:21] 2025-02-26 14:46:00,942 | INFO     | -- intersect: -23405482631.337395
[2025-02-26 15:46:21] 2025-02-26 14:46:00,942 | INFO     | intersect: -23405482631.337395
[2025-02-26 15:46:21] 2025-02-26 14:46:00,943 | INFO     | chi2: 4.048838682649166
[2025-02-26 15:46:21] 2025-02-26 14:46:00,943 | INFO     | current chi2=4.048838682649166 (change=16.2790685193239 %)
[2025-02-26 15:46:21] 2025-02-26 14:46:00,943 | INFO     | right removable region: 344
[2025-02-26 15:46:21] 2025-02-26 14:46:00,943 | INFO     | model: linear, x: [1740560144.0, 1740560205.0, 1740560266.0, 1740560327.0, 1740560388.0, 1740560449.0, 1740560510.0, 1740560571.0, 1740560632.0, 1740560693.0, 1740
[2025-02-26 15:46:21] 2025-02-26 14:46:00,944 | INFO     | sum of square deviations: 12733038740.0
[2025-02-26 15:46:21] 2025-02-26 14:46:00,947 | INFO     | sum of deviations: 67760179332.00001
[2025-02-26 15:46:21] 2025-02-26 14:46:00,947 | INFO     | mean x: 1740570636.0
[2025-02-26 15:46:21] 2025-02-26 14:46:00,947 | INFO     | mean y: 2345233.6666666665
[2025-02-26 15:46:21] 2025-02-26 14:46:00,947 | INFO     | -- intersect: -9260280981.776178
[2025-02-26 15:46:21] 2025-02-26 14:46:00,947 | INFO     | intersect: -9260280981.776178
[2025-02-26 15:46:21] 2025-02-26 14:46:00,948 | INFO     | chi2: 2.3417571255524585
[2025-02-26 15:46:21] 2025-02-26 14:46:00,948 | INFO     | current chi2=2.3417571255524585 (change=51.57769839215137 %)
[2025-02-26 15:46:21] 2025-02-26 14:46:00,948 | INFO     | model: linear, x: [1740560449.0, 1740560510.0, 1740560571.0, 1740560632.0, 1740560693.0, 1740560754.0, 1740560815.0, 1740560876.0, 1740560937.0, 1740560998.0, 1740
[2025-02-26 15:46:21] 2025-02-26 14:46:00,949 | INFO     | sum of square deviations: 12187409905.0
[2025-02-26 15:46:21] 2025-02-26 14:46:00,952 | INFO     | sum of deviations: 1784221391.0
[2025-02-26 15:46:21] 2025-02-26 14:46:00,952 | INFO     | mean x: 1740570788.5
[2025-02-26 15:46:21] 2025-02-26 14:46:00,952 | INFO     | mean y: 2363673.8294117646
[2025-02-26 15:46:21] 2025-02-26 14:46:00,952 | INFO     | -- intersect: -252453687.49666867
[2025-02-26 15:46:21] 2025-02-26 14:46:00,952 | INFO     | intersect: -252453687.49666867
[2025-02-26 15:46:21] 2025-02-26 14:46:00,952 | INFO     | chi2: 0.9113285363449439
[2025-02-26 15:46:21] 2025-02-26 14:46:00,953 | INFO     | current chi2=0.9113285363449439 (change=61.08355873455721 %)
[2025-02-26 15:46:21] 2025-02-26 14:46:00,953 | INFO     | model: linear, x: [1740560754.0, 1740560815.0, 1740560876.0, 1740560937.0, 1740560998.0, 1740561059.0, 1740561120.0, 1740561181.0, 1740561242.0, 1740561303.0, 1740
[2025-02-26 15:46:21] 2025-02-26 14:46:00,954 | INFO     | sum of square deviations: 11657595320.0
[2025-02-26 15:46:21] 2025-02-26 14:46:00,957 | INFO     | sum of deviations: -12344218335.0
[2025-02-26 15:46:21] 2025-02-26 14:46:00,957 | INFO     | mean x: 1740570941.0
[2025-02-26 15:46:21] 2025-02-26 14:46:00,957 | INFO     | mean y: 2367721.1701492537
[2025-02-26 15:46:21] 2025-02-26 14:46:00,957 | INFO     | -- intersect: 1845456894.6636417
[2025-02-26 15:46:21] 2025-02-26 14:46:00,958 | INFO     | intersect: 1845456894.6636417
[2025-02-26 15:46:21] 2025-02-26 14:46:00,958 | INFO     | chi2: 0.8195985666029713
[2025-02-26 15:46:21] 2025-02-26 14:46:00,958 | INFO     | current chi2=0.8195985666029713 (change=10.06552149786433 %)
[2025-02-26 15:46:21] 2025-02-26 14:46:00,958 | INFO     | left removable region: 30
[2025-02-26 15:46:21] 2025-02-26 14:46:00,959 | INFO     | model: linear, x: [1740561669.0, 1740561730.0, 1740561791.0, 1740561852.0, 1740561913.0, 1740561974.0, 1740562035.0, 1740562096.0, 1740562157.0, 1740562218.0, 1740
[2025-02-26 15:46:21] 2025-02-26 14:46:00,959 | INFO     | sum of square deviations: 9599817202.5
[2025-02-26 15:46:21] 2025-02-26 14:46:00,961 | INFO     | sum of deviations: 6144695767.499999
[2025-02-26 15:46:21] 2025-02-26 14:46:00,962 | INFO     | mean x: 1740571215.5
[2025-02-26 15:46:21] 2025-02-26 14:46:00,962 | INFO     | mean y: 2374921.117834395
[2025-02-26 15:46:21] 2025-02-26 14:46:00,962 | INFO     | -- intersect: -1111738020.3379567
[2025-02-26 15:46:21] 2025-02-26 14:46:00,962 | INFO     | intersect: -1111738020.3379567
[2025-02-26 15:46:21] 2025-02-26 14:46:00,962 | INFO     | chi2: 0.0008253402447023952
[2025-02-26 15:46:21] 2025-02-26 14:46:00,962 | INFO     | -- intersect: -1111738020.3379567
[2025-02-26 15:46:21] 2025-02-26 14:46:00,963 | INFO     | current memory leak: 0.64 B/s (using 314 data points, chi2=0.00)
[2025-02-26 15:46:21] 2025-02-26 14:46:00,964 | INFO     | ..............................
[2025-02-26 15:46:21] 2025-02-26 14:46:00,964 | INFO     | . Timing measurements:
[2025-02-26 15:46:21] 2025-02-26 14:46:00,964 | INFO     | . get job = 0 s
[2025-02-26 15:46:21] 2025-02-26 14:46:00,964 | INFO     | . initial setup = 1 s
[2025-02-26 15:46:21] 2025-02-26 14:46:00,964 | INFO     | . payload setup = 8 s
[2025-02-26 15:46:21] 2025-02-26 14:46:00,964 | INFO     | . stage-in = 0 s
[2025-02-26 15:46:21] 2025-02-26 14:46:00,964 | INFO     | . payload execution = 21316 s
[2025-02-26 15:46:21] 2025-02-26 14:46:00,964 | INFO     | . stage-out = 1 s
[2025-02-26 15:46:21] 2025-02-26 14:46:00,964 | INFO     | . log creation = 0 s
[2025-02-26 15:46:21] 2025-02-26 14:46:00,965 | INFO     | ..............................
[2025-02-26 15:46:21] 2025-02-26 14:46:01,124 | INFO     | 
[2025-02-26 15:46:21] 2025-02-26 14:46:01,125 | INFO     | job summary report
[2025-02-26 15:46:21] 2025-02-26 14:46:01,125 | INFO     | --------------------------------------------------
[2025-02-26 15:46:21] 2025-02-26 14:46:01,125 | INFO     | PanDA job id: 6522333303
[2025-02-26 15:46:21] 2025-02-26 14:46:01,125 | INFO     | task id: 43205094
[2025-02-26 15:46:21] 2025-02-26 14:46:01,125 | INFO     | errors: (none)
[2025-02-26 15:46:21] 2025-02-26 14:46:01,125 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 15:46:21] 2025-02-26 14:46:01,125 | INFO     | pilot state: finished 
[2025-02-26 15:46:21] 2025-02-26 14:46:01,125 | INFO     | transexitcode: 0
[2025-02-26 15:46:21] 2025-02-26 14:46:01,125 | INFO     | exeerrorcode: 0
[2025-02-26 15:46:21] 2025-02-26 14:46:01,125 | INFO     | exeerrordiag: 
[2025-02-26 15:46:21] 2025-02-26 14:46:01,125 | INFO     | exitcode: 0
[2025-02-26 15:46:21] 2025-02-26 14:46:01,126 | INFO     | exitmsg: OK
[2025-02-26 15:46:21] 2025-02-26 14:46:01,126 | INFO     | cpuconsumptiontime: 80802 s
[2025-02-26 15:46:21] 2025-02-26 14:46:01,126 | INFO     | nevents: 400
[2025-02-26 15:46:21] 2025-02-26 14:46:01,126 | INFO     | neventsw: 0
[2025-02-26 15:46:21] 2025-02-26 14:46:01,126 | INFO     | pid: 1293527
[2025-02-26 15:46:21] 2025-02-26 14:46:01,126 | INFO     | pgrp: 1293527
[2025-02-26 15:46:21] 2025-02-26 14:46:01,126 | INFO     | corecount: 4
[2025-02-26 15:46:21] 2025-02-26 14:46:01,126 | INFO     | event service: False
[2025-02-26 15:46:21] 2025-02-26 14:46:01,126 | INFO     | sizes: {0: 2363558, 1: 2363757, 7: 2363963, 12: 2363991, 21327: 2397251, 21329: 2406398, 21336: 2406512}
[2025-02-26 15:46:21] 2025-02-26 14:46:01,126 | INFO     | --------------------------------------------------
[2025-02-26 15:46:21] 2025-02-26 14:46:01,126 | INFO     | 
[2025-02-26 15:46:21] 2025-02-26 14:46:01,127 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-02-26 15:46:21] 2025-02-26 14:46:01,156 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,156 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,156 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,158 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,158 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 15:46:21] 2025-02-26 14:46:01,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,158 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 15:46:21] 2025-02-26 14:46:01,158 | INFO     | job 6522333303 has completed (purged errors)
[2025-02-26 15:46:21] 2025-02-26 14:46:01,158 | INFO     | overall cleanup function is called
[2025-02-26 15:46:21] 2025-02-26 14:46:01,230 | WARNING  | process 1293527 can no longer be monitored (due to stat problems) - aborting
[2025-02-26 15:46:21] 2025-02-26 14:46:01,737 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 15:46:21] 2025-02-26 14:46:02,035 | INFO     | number of running child processes to parent process 1293527: 1
[2025-02-26 15:46:21] 2025-02-26 14:46:02,035 | INFO     | maximum number of monitored processes: 6
[2025-02-26 15:46:21] 2025-02-26 14:46:02,036 | INFO     | aborting job monitoring since job object (job id=6522333303) has expired
[2025-02-26 15:46:21] 2025-02-26 14:46:02,170 | INFO     | --- collectZombieJob: --- 10, [1293527]
[2025-02-26 15:46:21] 2025-02-26 14:46:02,171 | INFO     | zombie collector waiting for pid 1293527
[2025-02-26 15:46:21] 2025-02-26 14:46:02,171 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 15:46:21] 2025-02-26 14:46:02,171 | INFO     | collected zombie processes
[2025-02-26 15:46:21] 2025-02-26 14:46:02,171 | INFO     | will attempt to kill all subprocesses of pid=1293527
[2025-02-26 15:46:21] 2025-02-26 14:46:02,479 | INFO     | process IDs to be killed: [1293527] (in reverse order)
[2025-02-26 15:46:21] 2025-02-26 14:46:02,744 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 15:46:21] 2025-02-26 14:46:02,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 15:46:21] 2025-02-26 14:46:02,769 | INFO     | did not find any defunct processes belonging to 1293527
[2025-02-26 15:46:21] 2025-02-26 14:46:02,786 | INFO     | did not find any defunct processes belonging to 1293527
[2025-02-26 15:46:21] 2025-02-26 14:46:02,787 | INFO     | ready for new job
[2025-02-26 15:46:21] 2025-02-26 14:46:02,787 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 15:46:21] 2025-02-26 14:46:02,791 | INFO     | **************************************
[2025-02-26 15:46:21] 2025-02-26 14:46:02,791 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 15:46:21] 2025-02-26 14:46:02,791 | INFO     | **************************************
[2025-02-26 15:46:21] 2025-02-26 14:46:02,791 | INFO     | 
[2025-02-26 15:46:21] 2025-02-26 14:46:02,800 | INFO     | architecture information:
[2025-02-26 15:46:21] 2025-02-26 14:46:02,800 | INFO     | executing command: cat /etc/os-release
[2025-02-26 15:46:21] 2025-02-26 14:46:02,821 | INFO     | cat /etc/os-release:
[2025-02-26 15:46:21] NAME="CentOS Linux"
[2025-02-26 15:46:21] VERSION="7 (Core)"
[2025-02-26 15:46:21] ID="centos"
[2025-02-26 15:46:21] ID_LIKE="rhel fedora"
[2025-02-26 15:46:21] VERSION_ID="7"
[2025-02-26 15:46:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 15:46:21] ANSI_COLOR="0;31"
[2025-02-26 15:46:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 15:46:21] HOME_URL="https://www.centos.org/"
[2025-02-26 15:46:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 15:46:21] 
[2025-02-26 15:46:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 15:46:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 15:46:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 15:46:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 15:46:21] 
[2025-02-26 15:46:21] 2025-02-26 14:46:02,821 | INFO     | **************************************
[2025-02-26 15:46:21] 2025-02-26 14:46:03,324 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-02-26 15:46:21] 2025-02-26 14:46:03,346 | INFO     | sufficient remaining disk space (3320321146880 B)
[2025-02-26 15:46:21] 2025-02-26 14:46:03,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 15:46:21] 2025-02-26 14:46:03,347 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 15:46:21] 2025-02-26 14:46:03,347 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 15:46:21] 2025-02-26 14:46:03,348 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 15:46:21] 2025-02-26 14:46:03,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 15:46:21] 2025-02-26 14:46:03,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 15:46:21] 2025-02-26 14:46:03,349 | INFO     | aborting loop
[2025-02-26 15:46:21] 2025-02-26 14:46:03,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 15:46:21] 2025-02-26 14:46:03,510 | INFO     | all payload control threads have been joined
[2025-02-26 15:46:21] 2025-02-26 14:46:03,590 | INFO     | all data control threads have been joined
[2025-02-26 15:46:21] 2025-02-26 14:46:03,911 | INFO     | all job control threads have been joined
[2025-02-26 15:46:21] 2025-02-26 14:46:04,352 | INFO     | [job] retrieve thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:04,354 | INFO     | [job] job monitor thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:04,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 15:46:21] 2025-02-26 14:46:04,516 | INFO     | [payload] control thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:04,596 | INFO     | [data] control thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:04,597 | INFO     | [data] copytool_in thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:04,608 | INFO     | [payload] failed_post thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:04,712 | INFO     | [payload] validate_post thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:04,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 15:46:21] 2025-02-26 14:46:04,916 | INFO     | [job] control thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:05,253 | INFO     | [job] validate thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:05,400 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:05,525 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:05,763 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:06,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 15:46:21] 2025-02-26 14:46:06,518 | INFO     | [data] copytool_out thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:07,085 | INFO     | [job] queue monitor thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:08,780 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:13,402 | INFO     | job.realtimelogging is not enabled
[2025-02-26 15:46:21] 2025-02-26 14:46:14,407 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 15:46:21] 2025-02-26 14:46:16,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22827319654208)>', '<ExcThread(monitor, started 22826610325248)>']
[2025-02-26 15:46:21] 2025-02-26 14:46:16,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 15:46:21] 2025-02-26 14:46:16,415 | INFO     | [monitor] control thread has ended
[2025-02-26 15:46:21] 2025-02-26 14:46:21,277 | INFO     | all workflow threads have been joined
[2025-02-26 15:46:21] 2025-02-26 14:46:21,278 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 15:46:21] 2025-02-26 14:46:21,278 | INFO     | traces error code: 0
[2025-02-26 15:46:21] 2025-02-26 14:46:21,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 15:46:21] 2025-02-26 14:46:21,475 [wrapper] ==== pilot stdout END ====
[2025-02-26 15:46:21] 2025-02-26 14:46:21,480 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 15:46:21] 2025-02-26 14:46:21,483 [wrapper] pilotpid: 1286041
[2025-02-26 15:46:21] 2025-02-26 14:46:21,486 [wrapper] Pilot exit status: 0
[2025-02-26 15:46:21] 2025-02-26 14:46:21,500 [wrapper] pandaids: 6522333303
[2025-02-26 15:46:21] 2025-02-26 14:46:21,649 [wrapper] cleanup supervisor_pilot 2787145 1286042
[2025-02-26 15:46:21] 2025-02-26 14:46:21,656 [wrapper] Test setup, not cleaning
[2025-02-26 15:46:21] 2025-02-26 14:46:21,665 [wrapper] apfmon messages muted
[2025-02-26 15:46:21] 2025-02-26 14:46:21,668 [wrapper] ==== wrapper stdout END ====
[2025-02-26 15:46:21] 2025-02-26 14:46:21,672 [wrapper] ==== wrapper stderr END ====
[2025-02-26 15:46:21]  *** Error codes and diagnostics ***
[2025-02-26 15:46:21]     "exeErrorCode": 0,
[2025-02-26 15:46:21]     "exeErrorDiag": "",
[2025-02-26 15:46:21]     "pilotErrorCode": 0,
[2025-02-26 15:46:21]     "pilotErrorDiag": "",
[2025-02-26 15:46:21]  *** Listing of results directory ***
[2025-02-26 15:46:21] total 656600
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc    491065 Feb 21 15:15 pilot3.tar.gz
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc      5118 Feb 21 15:20 queuedata.json
[2025-02-26 15:46:21] -rwx------ 1 boinc boinc     35865 Feb 21 15:22 runpilot2-wrapper.sh
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc       100 Feb 26 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 15:46:21] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 09:49 run_atlas
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc       105 Feb 26 09:49 job.xml
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc      6677 Feb 26 09:49 init_data.xml
[2025-02-26 15:46:21] -rw-r--r-- 2 boinc boinc 342927941 Feb 26 09:49 EVNT.43092757._001661.pool.root.1
[2025-02-26 15:46:21] -rw-r--r-- 2 boinc boinc     17569 Feb 26 09:49 start_atlas.sh
[2025-02-26 15:46:21] drwxrwx--x 2 boinc boinc      4096 Feb 26 09:49 shared
[2025-02-26 15:46:21] -rw-r--r-- 2 boinc boinc    503561 Feb 26 09:49 input.tar.gz
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc         0 Feb 26 09:49 boinc_lockfile
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc      2547 Feb 26 09:49 pandaJob.out
[2025-02-26 15:46:21] -rw------- 1 boinc boinc       424 Feb 26 09:49 setup.sh.local
[2025-02-26 15:46:21] -rw------- 1 boinc boinc    986636 Feb 26 09:50 agis_schedconf.cvmfs.json
[2025-02-26 15:46:21] drwx------ 4 boinc boinc      4096 Feb 26 09:50 pilot3
[2025-02-26 15:46:21] -rw------- 1 boinc boinc 319875923 Feb 26 15:45 HITS.43205094._032577.pool.root.1
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc       531 Feb 26 15:45 boinc_task_state.xml
[2025-02-26 15:46:21] -rw------- 1 boinc boinc      1023 Feb 26 15:45 memory_monitor_summary.json
[2025-02-26 15:46:21] -rw------- 1 boinc boinc   1569202 Feb 26 15:45 agis_ddmendpoints.agis.ALL.json
[2025-02-26 15:46:21] -rw------- 1 boinc boinc    430701 Feb 26 15:45 log.43205094._032577.job.log.tgz.1
[2025-02-26 15:46:21] -rw------- 1 boinc boinc        95 Feb 26 15:46 pilot_heartbeat.json
[2025-02-26 15:46:21] -rw------- 1 boinc boinc      7695 Feb 26 15:46 heartbeat.json
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc      8192 Feb 26 15:46 boinc_mmap_file
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc        28 Feb 26 15:46 wrapper_checkpoint.txt
[2025-02-26 15:46:21] -rw------- 1 boinc boinc      4421 Feb 26 15:46 pilotlog.txt
[2025-02-26 15:46:21] -rw------- 1 boinc boinc   2451590 Feb 26 15:46 log.43205094._032577.job.log.1
[2025-02-26 15:46:21] -rw------- 1 boinc boinc       357 Feb 26 15:46 output.list
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc       620 Feb 26 15:46 runtime_log
[2025-02-26 15:46:21] -rw------- 1 boinc boinc   2897920 Feb 26 15:46 result.tar.gz
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc     11424 Feb 26 15:46 runtime_log.err
[2025-02-26 15:46:21] -rw------- 1 boinc boinc       666 Feb 26 15:46 WS3NDmy5i56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmOTdKDm1fByJm.diag
[2025-02-26 15:46:21] -rw-r--r-- 1 boinc boinc     21360 Feb 26 15:46 stderr.txt
[2025-02-26 15:46:21] HITS file was successfully produced:
[2025-02-26 15:46:21] -rw------- 1 boinc boinc 319875923 Feb 26 15:45 shared/HITS.pool.root.1
[2025-02-26 15:46:21]  *** Contents of shared directory: ***
[2025-02-26 15:46:21] total 650624
[2025-02-26 15:46:21] -rw-r--r-- 2 boinc boinc 342927941 Feb 26 09:49 ATLAS.root_0
[2025-02-26 15:46:21] -rw-r--r-- 2 boinc boinc     17569 Feb 26 09:49 start_atlas.sh
[2025-02-26 15:46:21] -rw-r--r-- 2 boinc boinc    503561 Feb 26 09:49 input.tar.gz
[2025-02-26 15:46:21] -rw------- 1 boinc boinc 319875923 Feb 26 15:45 HITS.pool.root.1
[2025-02-26 15:46:21] -rw------- 1 boinc boinc   2897920 Feb 26 15:46 result.tar.gz
15:46:22 (1281551): run_atlas exited; CPU time 80479.457972
15:46:22 (1281551): called boinc_finish(0)

</stderr_txt>
]]>

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