Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-22 14:52:13 (2952): Detected: vboxwrapper 26206
2025-02-22 14:52:13 (2952): Detected: BOINC client v8.0.2
2025-02-22 14:52:14 (2952): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-22 14:52:14 (2952): Successfully copied 'init_data.xml' to the shared directory.
2025-02-22 14:52:14 (2952): Create VM. (boinc_692f5f9a7ed0617a, slot#13)
2025-02-22 14:52:15 (2952): Setting Memory Size for VM. (4200MB)
2025-02-22 14:52:15 (2952): Setting CPU Count for VM. (2)
2025-02-22 14:52:15 (2952): Setting Chipset Options for VM.
2025-02-22 14:52:16 (2952): Setting Graphics Controller Options for VM.
2025-02-22 14:52:16 (2952): Setting Boot Options for VM.
2025-02-22 14:52:16 (2952): Setting Network Configuration for NAT.
2025-02-22 14:52:16 (2952): Enabling VM Network Access.
2025-02-22 14:52:17 (2952): Disabling USB Support for VM.
2025-02-22 14:52:17 (2952): Disabling COM Port Support for VM.
2025-02-22 14:52:17 (2952): Disabling LPT Port Support for VM.
2025-02-22 14:52:18 (2952): Disabling Audio Support for VM.
2025-02-22 14:52:18 (2952): Disabling Clipboard Support for VM.
2025-02-22 14:52:18 (2952): Disabling Drag and Drop Support for VM.
2025-02-22 14:52:18 (2952): Adding storage controller(s) to VM.
2025-02-22 14:52:19 (2952): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-22 14:52:20 (2952): Adding VirtualBox Guest Additions to VM.
2025-02-22 14:52:20 (2952): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-22 14:52:21 (2952): forwarding host port 52165 to guest port 80
2025-02-22 14:52:21 (2952): Enabling remote desktop for VM.
2025-02-22 14:52:21 (2952): Required extension pack not installed, remote desktop not enabled.
2025-02-22 14:52:21 (2952): Enabling shared directory for VM.
2025-02-22 14:52:22 (2952): Starting VM using VBoxManage interface. (boinc_692f5f9a7ed0617a, slot#13)
2025-02-22 14:52:29 (2952): Successfully started VM. (PID = '7236')
2025-02-22 14:52:29 (2952): Reporting VM Process ID to BOINC.
2025-02-22 14:52:29 (2952): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-22 14:52:29 (2952): Guest Log: CPUID EDX: 0x178bfbff
2025-02-22 14:52:29 (2952): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-22 14:52:29 (2952): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-22 14:52:29 (2952): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-22 14:52:29 (2952): Detected: Web Application Enabled (http://localhost:52165)
2025-02-22 14:52:29 (2952): Preference change detected
2025-02-22 14:52:29 (2952): Setting CPU throttle for VM. (100%)
2025-02-22 14:52:29 (2952): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-22 14:52:32 (2952): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-22 14:52:32 (2952): Guest Log: BIOS: Booting from Hard Disk...
2025-02-22 14:52:34 (2952): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-22 14:52:34 (2952): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-22 14:52:34 (2952): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-22 14:52:39 (2952): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-22 14:52:39 (2952): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-22 14:52:46 (2952): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-22 14:52:46 (2952): Guest Log: 00:00:00.000092 main     Log opened 2025-02-22T14:52:43.899294000Z
2025-02-22 14:52:46 (2952): Guest Log: 00:00:00.000167 main     OS Product: Linux
2025-02-22 14:52:46 (2952): Guest Log: 00:00:00.000193 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-22 14:52:46 (2952): Guest Log: 00:00:00.000213 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-22 14:52:46 (2952): Guest Log: 00:00:00.000234 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-22 14:52:46 (2952): Guest Log: 00:00:00.000235 main     Process ID: 1257
2025-02-22 14:52:46 (2952): Guest Log: 00:00:00.000235 main     Package type: LINUX_64BITS_GENERIC
2025-02-22 14:52:46 (2952): Guest Log: 00:00:00.000826 main     5.2.32 r132073 started. Verbose level = 0
2025-02-22 14:52:46 (2952): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-22 14:52:46 (2952): Guest Log: [INFO] Mounting shared directory
2025-02-22 14:52:46 (2952): Guest Log: [INFO] Checking for init_data.xml
2025-02-22 14:52:56 (2952): Guest Log: 00:00:10.019893 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 588 447 688 000ns (GuestNow=1 740 196 375 454 184 000 ns GuestLast=1 740 235 963 901 872 000 ns fSetTimeLastLoop=true )
2025-02-22 14:52:58 (2952): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-22 14:52:58 (2952): Guest Log: [INFO] Detected branch: prod
2025-02-22 14:52:59 (2952): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-22 14:52:59 (2952): Guest Log: Copying input files
2025-02-22 14:53:00 (2952): Guest Log: Copied input files into RunAtlas.
2025-02-22 14:53:00 (2952): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-22 14:53:00 (2952): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-22 14:53:00 (2952): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-22 14:53:00 (2952): Guest Log: Further information can be found at the LHC@home message board.
2025-02-22 14:53:11 (2952): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-22 14:53:11 (2952): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-22 14:53:11 (2952): Guest Log: 2.6.3.0 1535 0 32100 142925 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-22 14:53:11 (2952): Guest Log: copied the webapp to /var/www
2025-02-22 14:53:11 (2952): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-22 14:53:11 (2952): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-22 14:53:12 (2952): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-22 14:53:12 (2952): Guest Log:  *** Starting ATLAS job. (PandaID=6522519495 taskID=43078919) ***
2025-02-22 16:33:12 (2952): Status Report: Elapsed Time: '6000.329807'
2025-02-22 16:33:12 (2952): Status Report: CPU Time: '9198.500000'
2025-02-22 18:14:22 (2952): Status Report: Elapsed Time: '12000.606588'
2025-02-22 18:14:22 (2952): Status Report: CPU Time: '21212.546875'
2025-02-22 20:04:28 (2952): Status Report: Elapsed Time: '18000.659721'
2025-02-22 20:04:28 (2952): Status Report: CPU Time: '34278.625000'
2025-02-22 21:48:53 (2952): Status Report: Elapsed Time: '24000.979578'
2025-02-22 21:48:53 (2952): Status Report: CPU Time: '46670.234375'
2025-02-22 23:35:04 (2952): Status Report: Elapsed Time: '30001.174458'
2025-02-22 23:35:04 (2952): Status Report: CPU Time: '59258.593750'
2025-02-23 01:18:45 (2952): Status Report: Elapsed Time: '36002.071323'
2025-02-23 01:18:45 (2952): Status Report: CPU Time: '71595.828125'
2025-02-23 02:59:37 (2952): Status Report: Elapsed Time: '42002.256693'
2025-02-23 02:59:37 (2952): Status Report: CPU Time: '83603.265625'
2025-02-23 04:40:18 (2952): Status Report: Elapsed Time: '48002.846634'
2025-02-23 04:40:18 (2952): Status Report: CPU Time: '95609.640625'
2025-02-23 06:04:10 (2952): Guest Log:  *** Job finished ***
2025-02-23 06:04:10 (2952): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:40,055 | INFO     | [job] validate thread has finished
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:40,142 | INFO     | [payload] validate_post thread has finished
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:42,128 | INFO     | [data] queue_monitor thread has finished
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:43,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140657239582528)>', '<ExcThread(monitor, started 140656655709952)>']
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:43,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:43,576 | INFO     | [monitor] control thread has ended
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,289 | INFO     | all workflow threads have been joined
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,289 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,290 | INFO     | traces error code: 0
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,392 [wrapper] ==== pilot stdout END ====
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,396 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,400 [wrapper] pilotpid: 5851
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,403 [wrapper] Pilot exit status: 0
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,849 [wrapper] pandaids: 6522519495
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,872 [wrapper] cleanup supervisor_pilot 11081 5852
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,876 [wrapper] Test setup, not cleaning
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,883 [wrapper] apfmon messages muted
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,887 [wrapper] ==== wrapper stdout END ====
2025-02-23 06:04:10 (2952): Guest Log: 2025-02-22 19:03:48,890 [wrapper] ==== wrapper stderr END ====
2025-02-23 06:04:10 (2952): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 06:04:10 (2952): Guest Log:     "exeErrorCode": 0,
2025-02-23 06:04:10 (2952): Guest Log:     "exeErrorDiag": "",
2025-02-23 06:04:10 (2952): Guest Log:     "pilotErrorCode": 0,
2025-02-23 06:04:10 (2952): Guest Log:     "pilotErrorDiag": "",
2025-02-23 06:04:10 (2952): Guest Log:  *** Listing of results directory ***
2025-02-23 06:04:10 (2952): Guest Log: total 339080
2025-02-23 06:04:10 (2952): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 21 22:25 queuedata.json
2025-02-23 06:04:10 (2952): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 21 22:25 pilot3.tar.gz
2025-02-23 06:04:10 (2952): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 21 22:25 runpilot2-wrapper.sh
2025-02-23 06:04:10 (2952): Guest Log: -rwxr-xr-x. 1 atlas atlas      9004 Feb 22 03:52 init_data.xml
2025-02-23 06:04:10 (2952): Guest Log: -rwxr-xr-x. 1 atlas atlas    503555 Feb 22 03:52 input.tar.gz
2025-02-23 06:04:10 (2952): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 22 03:52 start_atlas.sh
2025-02-23 06:04:10 (2952): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 22 03:52 EVNT.43078917._002518.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 06:04:10 (2952): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Feb 22 03:53 pandaJob.out
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas       424 Feb 22 03:53 setup.sh.local
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas    987681 Feb 22 03:55 agis_schedconf.cvmfs.json
2025-02-23 06:04:10 (2952): Guest Log: drwx------. 4 atlas atlas      4096 Feb 22 03:55 pilot3
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas 326123783 Feb 22 19:02 HITS.43078919._085494.pool.root.1
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas        95 Feb 22 19:02 pilot_heartbeat.json
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas      1021 Feb 22 19:03 memory_monitor_summary.json
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 22 19:03 agis_ddmendpoints.agis.ALL.json
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas    796633 Feb 22 19:03 log.43078919._085494.job.log.tgz.1
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas      7713 Feb 22 19:03 heartbeat.json
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 22 19:03 pilotlog.txt
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas   7877798 Feb 22 19:03 log.43078919._085494.job.log.1
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas       357 Feb 22 19:03 output.list
2025-02-23 06:04:10 (2952): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 22 19:03 runtime_log
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas   8693760 Feb 22 19:03 result.tar.gz
2025-02-23 06:04:10 (2952): Guest Log: -rw-r--r--. 1 atlas atlas     10966 Feb 22 19:03 runtime_log.err
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas       669 Feb 22 19:03 FlTLDmrdq56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmmndKDmlmSU6n.diag
2025-02-23 06:04:10 (2952): Guest Log: Looking for outputfile HITS.43078919._085494.pool.root.1
2025-02-23 06:04:10 (2952): Guest Log: HITS file was successfully produced
2025-02-23 06:04:10 (2952): Guest Log: -rw-------. 1 atlas atlas 326123783 Feb 22 19:02 /home/atlas/RunAtlas/HITS.43078919._085494.pool.root.1
2025-02-23 06:04:11 (2952): Guest Log: Successfully finished the ATLAS job!
2025-02-23 06:04:11 (2952): Guest Log: Copying the results back to the shared directory!
2025-02-23 06:04:11 (2952): Guest Log:  *** Contents of shared directory: ***
2025-02-23 06:04:11 (2952): Guest Log: total 667304
2025-02-23 06:04:11 (2952): Guest Log: -rwxrwxrwx. 1 root root 347955296 Feb 22 03:52 ATLAS.root_0
2025-02-23 06:04:11 (2952): Guest Log: -rwxrwxrwx. 1 root root 326123783 Feb 22  2025 HITS.pool.root.1
2025-02-23 06:04:11 (2952): Guest Log: -rwxrwxrwx. 1 root root      9004 Feb 22 03:52 init_data.xml
2025-02-23 06:04:11 (2952): Guest Log: -rwxrwxrwx. 1 root root    503555 Feb 22 03:50 input.tar.gz
2025-02-23 06:04:11 (2952): Guest Log: -rwxrwxrwx. 1 root root   8693760 Feb 22  2025 result.tar.gz
2025-02-23 06:04:11 (2952): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 22 03:50 start_atlas.sh
2025-02-23 06:04:11 (2952): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 06:04:11 (2952): VM Completion File Detected.
2025-02-23 06:04:11 (2952): Powering off VM.
2025-02-23 06:04:12 (2952): Successfully stopped VM.
2025-02-23 06:04:12 (2952): Deregistering VM. (boinc_692f5f9a7ed0617a, slot#13)
2025-02-23 06:04:12 (2952): Removing network bandwidth throttle group from VM.
2025-02-23 06:04:12 (2952): Removing VM from VirtualBox.
06:04:18 (2952): called boinc_finish(0)

</stderr_txt>
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